PRJNA438478: RNAseq of wild type zebrafish germline

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
zic3 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000071497	zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila)

Gene	Promoter	Pearson corr. coef.	P-value	Plot
zic3	dr11_v1_chr14_-_32016615_32016615	-0.89	6.4e-07	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr22_-_37565348 Show fit	0.29	ENSDART00000149482 ENSDART00000104478	fxr1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fragile X mental retardation, autosomal homolog 1
chr6_+_27090800 Show fit	0.23	ENSDART00000121558	atg4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	autophagy related 4B, cysteine peptidase
chr23_-_14057191 Show fit	0.18	ENSDART00000154908	adcy6a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adenylate cyclase 6a
chr11_+_34921492 Show fit	0.17	ENSDART00000128070	gnai2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a
chr19_+_23982466 Show fit	0.16	ENSDART00000080673	syt11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin XIa
chr2_-_57707039 Show fit	0.16	ENSDART00000097685	CABZ01060891.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr2_+_51783120 Show fit	0.15	ENSDART00000177559	crygn1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	crystallin, gamma N1
chr8_+_49096486 Show fit	0.13	ENSDART00000192998	zgc:56525 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:56525
chr10_-_105100 Show fit	0.12	ENSDART00000145716	ttc3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tetratricopeptide repeat domain 3
chr19_+_9050852 Show fit	0.11	ENSDART00000151031	ash1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ash1 (absent, small, or homeotic)-like (Drosophila)
chr25_-_34740627 Show fit	0.09	ENSDART00000137665	frs2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibroblast growth factor receptor substrate 2b
chr20_-_21910043 Show fit	0.08	ENSDART00000152290 ENSDART00000109084	daam1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dishevelled associated activator of morphogenesis 1b
chr14_-_16476863 Show fit	0.07	ENSDART00000089021	canx Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calnexin
chr2_-_30784198 Show fit	0.06	ENSDART00000182523 ENSDART00000147355	rgs20 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulator of G protein signaling 20
chr22_-_7809904 Show fit	0.06	ENSDART00000182269 ENSDART00000097201 ENSDART00000138522	si:ch73-44m9.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit si:ch73-44m9.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-44m9.3 si:ch73-44m9.1
chr7_+_36898622 Show fit	0.04	ENSDART00000190773	tox3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TOX high mobility group box family member 3
chr5_-_22615087 Show fit	0.02	ENSDART00000146035	zgc:113208 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113208
chr8_+_35356944 Show fit	0.01	ENSDART00000143243	si:dkeyp-14d3.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-14d3.1
chr2_-_30784502 Show fit	0.01	ENSDART00000056735	rgs20 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	regulator of G protein signaling 20
chr8_-_40075983 Show fit	0.01	ENSDART00000141455	ggt1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gamma-glutamyltransferase 1a
chr20_-_40725142 Show fit	0.00	ENSDART00000181279	cx32.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 32.2

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0035588	adenosine receptor signaling pathway(GO:0001973) purinergic receptor signaling pathway(GO:0035587) G-protein coupled purinergic receptor signaling pathway(GO:0035588)
0.0	0.3	GO:0051489	regulation of filopodium assembly(GO:0051489)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:1902737	dendritic spine neck(GO:0044326) dendritic filopodium(GO:1902737)
0.0	0.1	GO:0016586	RSC complex(GO:0016586)