PRJNA438478: RNAseq of wild type zebrafish germline

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
osr2 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000038006	odd-skipped related transciption factor 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
osr2	dr11_v1_chr16_-_54405037_54405037	0.31	2.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_-_61787969 Show fit	0.23	ENSDART00000112744	gas2l2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	growth arrest specific 2 like 2
chr19_-_9503473 Show fit	0.17	ENSDART00000091615	iffo1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	intermediate filament family orphan 1a
chr22_-_28871787 Show fit	0.16	ENSDART00000104828	gtpbp2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GTP binding protein 2b
chr15_-_39848822 Show fit	0.16	ENSDART00000155230	si:dkey-263j23.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-263j23.1
chr18_-_39200557 Show fit	0.16	ENSDART00000132367 ENSDART00000183672	si:ch211-235f12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit mapk6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-235f12.2 mitogen-activated protein kinase 6
chr6_+_46431848 Show fit	0.14	ENSDART00000181056 ENSDART00000144569 ENSDART00000064865 ENSDART00000133992	stau1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	staufen double-stranded RNA binding protein 1
chr12_-_38548299 Show fit	0.14	ENSDART00000153374	si:dkey-1f1.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-1f1.3
chr14_+_23717165 Show fit	0.13	ENSDART00000006373	ndfip1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Nedd4 family interacting protein 1
chr19_-_6134802 Show fit	0.12	ENSDART00000140051	cica Links NCBI UniProt ZFIN ENSEMBL Google Show fit	capicua transcriptional repressor a
chr16_-_13680692 Show fit	0.12	ENSDART00000047452	ube2s Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2S
chr7_+_42206543 Show fit	0.11	ENSDART00000112543	phkb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphorylase kinase, beta
chr2_+_3986083 Show fit	0.10	ENSDART00000188979	mkxb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mohawk homeobox b
chr7_-_42206720 Show fit	0.10	ENSDART00000110907	itfg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	integrin alpha FG-GAP repeat containing 1
chr13_+_30696286 Show fit	0.10	ENSDART00000192411	cxcl18a.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chemokine (C-X-C motif) ligand 18a, duplicate 1
chr16_-_13612650 Show fit	0.09	ENSDART00000080372	dbpb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	D site albumin promoter binding protein b
chr12_+_28856151 Show fit	0.09	ENSDART00000152969	nfe2l1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear factor, erythroid 2-like 1b
chr23_-_36003282 Show fit	0.08	ENSDART00000103150	calcoco1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium binding and coiled-coil domain 1a
chr6_-_40884453 Show fit	0.08	ENSDART00000017968 ENSDART00000154100	sirt4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sirtuin 4
chr13_+_29778610 Show fit	0.07	ENSDART00000132004	pax2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 2a
chr8_+_10835456 Show fit	0.07	ENSDART00000151388	mapk13 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase 13
chr10_+_38512270 Show fit	0.07	ENSDART00000109752	serpinh1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a
chr18_-_27316599 Show fit	0.06	ENSDART00000028294	zgc:56106 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:56106
chr5_+_13373593 Show fit	0.06	ENSDART00000051668 ENSDART00000183883	ccl19a.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chemokine (C-C motif) ligand 19a, tandem duplicate 2
chr14_+_36246726 Show fit	0.06	ENSDART00000105602	elovl6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ELOVL fatty acid elongase 6
chr3_-_32958505 Show fit	0.06	ENSDART00000147374 ENSDART00000136919	casp6l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	caspase 6, apoptosis-related cysteine peptidase, like 1
chr5_-_48307804 Show fit	0.05	ENSDART00000182831 ENSDART00000186920 ENSDART00000183585	mef2cb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myocyte enhancer factor 2cb
chr23_+_36095260 Show fit	0.05	ENSDART00000127384	hoxc9a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	homeobox C9a
chr16_+_35344031 Show fit	0.05	ENSDART00000167140	si:dkey-34d22.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-34d22.1
chr14_+_8504410 Show fit	0.04	ENSDART00000123364	vegfba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vascular endothelial growth factor Ba
chr7_+_17374560 Show fit	0.04	ENSDART00000172272 ENSDART00000073467	nitr7a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	novel immune-type receptor 7a
chr10_-_13239367 Show fit	0.03	ENSDART00000001253	si:busm1-57f23.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:busm1-57f23.1
chr23_-_46040618 Show fit	0.02	ENSDART00000161415	CABZ01080918.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_-_29418620 Show fit	0.02	ENSDART00000172634	ryr3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ryanodine receptor 3
chr7_+_42206847 Show fit	0.01	ENSDART00000149250	phkb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphorylase kinase, beta
chr8_+_48858132 Show fit	0.01	ENSDART00000124737 ENSDART00000079644	tp73 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tumor protein p73
chr23_-_4704938 Show fit	0.01	ENSDART00000067293	cnbpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CCHC-type zinc finger, nucleic acid binding protein a
chr1_+_44826367 Show fit	0.01	ENSDART00000146962	STX3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:165520
chr21_-_40834413 Show fit	0.01	ENSDART00000148513	limk1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LIM domain kinase 1b
chr8_-_22639794 Show fit	0.01	ENSDART00000188029	iqsec2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	IQ motif and Sec7 domain 2a
chr23_+_7379728 Show fit	0.01	ENSDART00000012194	gata5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GATA binding protein 5
chr25_-_19395476 Show fit	0.01	ENSDART00000182622	map1ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule-associated protein 1Ab
chr20_-_26866111 Show fit	0.00	ENSDART00000077767	mylk4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin light chain kinase family, member 4b
chr22_-_11626014 Show fit	0.00	ENSDART00000063133 ENSDART00000160085	gcga Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glucagon a
chr22_-_5006801 Show fit	0.00	ENSDART00000106166	rx1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	retinal homeobox gene 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:1904668	positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0	0.2	GO:0051764	actin crosslink formation(GO:0051764)
0.0	0.0	GO:1901492	positive regulation of lymphangiogenesis(GO:1901492)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0050699	WW domain binding(GO:0050699)
0.0	0.2	GO:0008093	cytoskeletal adaptor activity(GO:0008093)