PRJNA438478: RNAseq of wild type zebrafish germline

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
msx1a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000116118	muscle segment homeobox 1a

Gene	Promoter	Pearson corr. coef.	P-value	Plot
msx1a	dr11_v1_chr14_-_12822_12847	-0.61	7.5e-03	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr11_-_6452444 Show fit	4.98	ENSDART00000137879 ENSDART00000134957 ENSDART00000004483	larp6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	La ribonucleoprotein domain family, member 6b
chr10_-_21362071 Show fit	4.97	ENSDART00000125167	avd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	avidin
chr10_-_21362320 Show fit	4.64	ENSDART00000189789	avd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	avidin
chr21_+_25777425 Show fit	3.78	ENSDART00000021620	cldnd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	claudin d
chr9_-_35633827 Show fit	3.75	ENSDART00000077745	zp2l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 2, like 1
chr20_-_23426339 Show fit	3.52	ENSDART00000004625	zar1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zygote arrest 1
chr14_+_34490445 Show fit	3.49	ENSDART00000132193 ENSDART00000148044	wnt8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	wingless-type MMTV integration site family, member 8a
chr18_-_40708537 Show fit	3.30	ENSDART00000077577	si:ch211-132b12.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-132b12.8
chr10_-_25217347 Show fit	3.10	ENSDART00000036906	kpna7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	karyopherin alpha 7 (importin alpha 8)
chr8_+_45334255 Show fit	2.93	ENSDART00000126848 ENSDART00000134161 ENSDART00000142322 ENSDART00000145011 ENSDART00000183560	pabpc1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	poly(A) binding protein, cytoplasmic 1-like
chr11_+_18183220 Show fit	2.81	ENSDART00000113468	LO018315.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr6_+_21001264 Show fit	2.72	ENSDART00000044519 ENSDART00000151278	cx44.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 44.2
chr17_+_16046132 Show fit	2.63	ENSDART00000155005	si:ch73-204p21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-204p21.2
chr17_+_16046314 Show fit	2.60	ENSDART00000154554 ENSDART00000154338 ENSDART00000155336	si:ch73-204p21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-204p21.2
chr11_+_18130300 Show fit	2.57	ENSDART00000169146	zgc:175135 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:175135
chr1_-_18811517 Show fit	2.56	ENSDART00000142026	si:dkey-167i21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-167i21.2
chr10_-_34002185 Show fit	2.56	ENSDART00000046599	zar1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zygote arrest 1-like
chr7_-_48263516 Show fit	2.40	ENSDART00000006619 ENSDART00000142370 ENSDART00000148273 ENSDART00000147968	rbpms2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RNA binding protein with multiple splicing 2b
chr16_+_39159752 Show fit	2.30	ENSDART00000122081	sybu Links NCBI UniProt ZFIN ENSEMBL Google Show fit	syntabulin (syntaxin-interacting)
chr11_+_18157260 Show fit	2.30	ENSDART00000144659	zgc:173545 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:173545
chr11_-_44801968 Show fit	2.30	ENSDART00000161846	map1lc3c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule-associated protein 1 light chain 3 gamma
chr10_-_34915886 Show fit	2.08	ENSDART00000141201 ENSDART00000002166	ccna1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin A1
chr1_-_55248496 Show fit	2.06	ENSDART00000098615	nanos3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nanos homolog 3
chr2_+_6253246 Show fit	2.03	ENSDART00000058256 ENSDART00000076700	zp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 3b
chr15_-_25099679 Show fit	1.99	ENSDART00000154628	rflnb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	refilin B
chr3_-_32337653 Show fit	1.97	ENSDART00000156918 ENSDART00000156551	si:dkey-16p21.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-16p21.8
chr10_-_34916208 Show fit	1.93	ENSDART00000187371	ccna1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin A1
chr16_-_17197546 Show fit	1.91	ENSDART00000139939 ENSDART00000135146 ENSDART00000063800 ENSDART00000163606	gapdh Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glyceraldehyde-3-phosphate dehydrogenase
chr3_+_28860283 Show fit	1.78	ENSDART00000077235	alg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
chr19_-_8768564 Show fit	1.75	ENSDART00000170416	si:ch73-350k19.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-350k19.1
chr24_+_12835935 Show fit	1.67	ENSDART00000114762	nanog Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nanog homeobox
chr7_+_27603211 Show fit	1.51	ENSDART00000148782	cyp2r1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome P450, family 2, subfamily R, polypeptide 1
chr4_-_27099224 Show fit	1.50	ENSDART00000048383	creld2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cysteine-rich with EGF-like domains 2
chr2_-_21167652 Show fit	1.46	ENSDART00000185792	bmi1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bmi1 polycomb ring finger oncogene 1b
chr19_-_25119443 Show fit	1.45	ENSDART00000148953	ptp4a3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein tyrosine phosphatase type IVA, member 3
chr8_-_20230559 Show fit	1.34	ENSDART00000193677	mllt1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MLLT1, super elongation complex subunit a
chr13_-_36911118 Show fit	1.25	ENSDART00000048739	trim9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tripartite motif containing 9
chr3_+_56366395 Show fit	1.18	ENSDART00000154367	cacng5b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium channel, voltage-dependent, gamma subunit 5b
chr21_+_34088110 Show fit	1.17	ENSDART00000145123 ENSDART00000029599 ENSDART00000147519	mtmr1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myotubularin related protein 1b
chr8_-_20230802 Show fit	1.13	ENSDART00000063400	mllt1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MLLT1, super elongation complex subunit a
chr25_-_32869794 Show fit	1.08	ENSDART00000162784	tmem266 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 266
chr19_+_28187480 Show fit	1.06	ENSDART00000183825	irx4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	iroquois homeobox 4b
chr15_-_26931541 Show fit	1.06	ENSDART00000027563	ccdc9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 9
chr5_+_60590796 Show fit	1.05	ENSDART00000159859	tmem132e Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 132E
chr19_+_15441022 Show fit	1.04	ENSDART00000098970 ENSDART00000140276	lin28a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lin-28 homolog A (C. elegans)
chr20_-_40758410 Show fit	0.99	ENSDART00000183031	cx34.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 34.5
chr6_-_37744430 Show fit	0.94	ENSDART00000150177 ENSDART00000149722	nipa2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	non imprinted in Prader-Willi/Angelman syndrome 2 (human)
chr3_-_26806032 Show fit	0.88	ENSDART00000143710	pigq Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatidylinositol glycan anchor biosynthesis, class Q
chr8_-_25034411 Show fit	0.86	ENSDART00000135973	nfyal Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, alpha, like
chr24_-_25144441 Show fit	0.84	ENSDART00000152104	phldb2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pleckstrin homology-like domain, family B, member 2b
chr19_+_15440841 Show fit	0.83	ENSDART00000182329	lin28a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lin-28 homolog A (C. elegans)
chr12_+_22580579 Show fit	0.82	ENSDART00000171725 ENSDART00000192290	capgb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	capping protein (actin filament), gelsolin-like b
chr10_+_43039947 Show fit	0.80	ENSDART00000193434	atg10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATG10 autophagy related 10 homolog (S. cerevisiae)
chr16_+_33163858 Show fit	0.79	ENSDART00000101943	rragca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ras-related GTP binding Ca
chr9_-_21460164 Show fit	0.78	ENSDART00000133469	zmym2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, MYM-type 2
chr19_-_19871211 Show fit	0.77	ENSDART00000170980	evx1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	even-skipped homeobox 1
chr3_+_18807006 Show fit	0.74	ENSDART00000180091	tnpo2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transportin 2 (importin 3, karyopherin beta 2b)
chr20_-_28800999 Show fit	0.71	ENSDART00000049462	rab15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAB15, member RAS oncogene family
chr2_-_57076687 Show fit	0.69	ENSDART00000161523	slc25a42 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 25, member 42
chr10_-_13343831 Show fit	0.67	ENSDART00000135941	il11ra Links NCBI UniProt ZFIN ENSEMBL Google Show fit	interleukin 11 receptor, alpha
chr12_+_21298317 Show fit	0.67	ENSDART00000178562	ca10a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	carbonic anhydrase Xa
chr3_-_26805455 Show fit	0.64	ENSDART00000180648	pigq Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatidylinositol glycan anchor biosynthesis, class Q
chr20_-_45060241 Show fit	0.63	ENSDART00000185227	klhl29 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kelch-like family member 29
chr4_-_72638972 Show fit	0.62	ENSDART00000193312	CABZ01054394.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr9_+_43799829 Show fit	0.56	ENSDART00000186240	ube2e3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
chr25_-_27621268 Show fit	0.55	ENSDART00000146205 ENSDART00000073511	hyal6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hyaluronoglucosaminidase 6
chr20_+_28803977 Show fit	0.55	ENSDART00000153351 ENSDART00000038149	fntb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	farnesyltransferase, CAAX box, beta
chr18_-_22094102 Show fit	0.54	ENSDART00000100904	pard6a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	par-6 family cell polarity regulator alpha
chr21_-_28640316 Show fit	0.54	ENSDART00000128237	nrg2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuregulin 2a
chr17_+_25856671 Show fit	0.53	ENSDART00000064817	wapla Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WAPL cohesin release factor a
chr2_-_38206034 Show fit	0.52	ENSDART00000144518 ENSDART00000137395	acin1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apoptotic chromatin condensation inducer 1a
chr24_-_30843250 Show fit	0.51	ENSDART00000162920	ptbp2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	polypyrimidine tract binding protein 2a
chr13_+_2625150 Show fit	0.51	ENSDART00000164177	plpp4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phospholipid phosphatase 4
chr18_+_15644559 Show fit	0.50	ENSDART00000061794	nr1h4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear receptor subfamily 1, group H, member 4
chr23_+_33963619 Show fit	0.48	ENSDART00000140666 ENSDART00000084792	plpbp Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pyridoxal phosphate binding protein
chr17_-_11439815 Show fit	0.46	ENSDART00000130105	psma3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proteasome subunit alpha 3
chr19_-_15855427 Show fit	0.44	ENSDART00000133059	cited4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a
chr10_-_32494499 Show fit	0.43	ENSDART00000129395	uvrag Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UV radiation resistance associated gene
chr7_+_38089650 Show fit	0.41	ENSDART00000052365	cebpg Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CCAAT/enhancer binding protein (C/EBP), gamma
chr21_-_36396334 Show fit	0.40	ENSDART00000183627	mrpl22 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial ribosomal protein L22
chr16_+_31827502 Show fit	0.40	ENSDART00000045210	mlf2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myeloid leukemia factor 2
chr16_-_17347727 Show fit	0.38	ENSDART00000144392	zyx Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zyxin
chr11_+_31864921 Show fit	0.38	ENSDART00000180252	diaph3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	diaphanous-related formin 3
chr23_+_38957472 Show fit	0.36	ENSDART00000193836	ATP9A Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase phospholipid transporting 9A (putative)
chr21_-_11654422 Show fit	0.35	ENSDART00000081614 ENSDART00000132699	cast Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calpastatin
chr2_+_37227011 Show fit	0.34	ENSDART00000126587 ENSDART00000084958	samd7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sterile alpha motif domain containing 7
chr10_-_32494304 Show fit	0.34	ENSDART00000028161	uvrag Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UV radiation resistance associated gene
chr16_+_31827653 Show fit	0.34	ENSDART00000187261	mlf2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myeloid leukemia factor 2
chr5_+_60928576 Show fit	0.33	ENSDART00000131041	doc2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	double C2-like domains, beta
chr9_+_34331368 Show fit	0.31	ENSDART00000147913	pou2f1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	POU class 2 homeobox 1b
chr14_-_32631013 Show fit	0.31	ENSDART00000176815	atp11c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase phospholipid transporting 11C
chr23_-_40194732 Show fit	0.31	ENSDART00000164931	tgm1l2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transglutaminase 1 like 2
chr25_+_10410620 Show fit	0.30	ENSDART00000151886	ehf Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ets homologous factor
chr20_+_41021054 Show fit	0.30	ENSDART00000146052	man1a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mannosidase, alpha, class 1A, member 1
chr12_+_6195191 Show fit	0.29	ENSDART00000043236 ENSDART00000186420	prkg1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein kinase, cGMP-dependent, type Ib
chr19_-_19556778 Show fit	0.27	ENSDART00000164060	tax1bp1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Tax1 (human T-cell leukemia virus type I) binding protein 1a
chr23_-_31913069 Show fit	0.25	ENSDART00000135526	mtfr2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial fission regulator 2
chr2_+_50626476 Show fit	0.24	ENSDART00000018150	neurod6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuronal differentiation 6b
chr21_-_3853204 Show fit	0.24	ENSDART00000188829	st6galnac4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
chr12_-_20120702 Show fit	0.24	ENSDART00000153387 ENSDART00000158412 ENSDART00000112768	ubald1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UBA-like domain containing 1a
chr20_-_19511016 Show fit	0.23	ENSDART00000168521	snx17 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 17
chr5_+_68807170 Show fit	0.21	ENSDART00000017849	her7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hairy and enhancer of split related-7
chr22_-_7129631 Show fit	0.20	ENSDART00000171359	asic1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acid-sensing (proton-gated) ion channel 1b
chr17_+_31914877 Show fit	0.20	ENSDART00000177801	FAM196A (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 196 member A
chr16_+_35661771 Show fit	0.19	ENSDART00000161393	map7d1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAP7 domain containing 1a
chr17_+_24821627 Show fit	0.19	ENSDART00000112389	wdr43 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat domain 43
chr8_+_25034544 Show fit	0.19	ENSDART00000123300	ngrn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neugrin, neurite outgrowth associated
chr14_-_3381303 Show fit	0.19	ENSDART00000171601	im:7150988 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	im:7150988
chr13_+_38430466 Show fit	0.18	ENSDART00000132691	adgrb3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor B3
chr7_-_12464412 Show fit	0.18	ENSDART00000178723	adamtsl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADAMTS-like 3
chr18_+_9362455 Show fit	0.18	ENSDART00000187025	sema3ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab
chr3_+_32365811 Show fit	0.17	ENSDART00000155967	ap2a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adaptor-related protein complex 2, alpha 1 subunit
chr15_+_9053059 Show fit	0.16	ENSDART00000012039	ppm1na Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative)
chr8_-_10961991 Show fit	0.16	ENSDART00000139603	trim33 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tripartite motif containing 33
chr23_+_30967686 Show fit	0.15	ENSDART00000144485	si:ch211-197l9.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-197l9.2
chr20_-_32110882 Show fit	0.14	ENSDART00000030324	grm1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamate receptor, metabotropic 1a
chr19_-_38830582 Show fit	0.14	ENSDART00000189966 ENSDART00000183055	adgrb2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor B2
chr25_+_11456696 Show fit	0.14	ENSDART00000171408	AGBL1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-141f14.1
chr15_-_25518084 Show fit	0.13	ENSDART00000158594	hif1al Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hypoxia-inducible factor 1, alpha subunit, like
chr8_+_26125218 Show fit	0.13	ENSDART00000145095	celsr3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cadherin, EGF LAG seven-pass G-type receptor 3
chr2_+_50608099 Show fit	0.12	ENSDART00000185805 ENSDART00000111135	neurod6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuronal differentiation 6b
chr18_-_29896367 Show fit	0.11	ENSDART00000191303	cmc2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	C-x(9)-C motif containing 2
chr20_-_29864390 Show fit	0.11	ENSDART00000161834 ENSDART00000132278	rnf144ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 144ab
chr13_-_36184476 Show fit	0.10	ENSDART00000057185	map3k9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase kinase kinase 9
chr15_-_12270857 Show fit	0.10	ENSDART00000170093	si:dkey-36i7.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-36i7.3
chr22_-_10486477 Show fit	0.10	ENSDART00000184366	aspn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	asporin (LRR class 1)
chr3_-_50443607 Show fit	0.09	ENSDART00000074036	rcvrna Links NCBI UniProt ZFIN ENSEMBL Google Show fit	recoverin a
chr23_-_1348933 Show fit	0.09	ENSDART00000168981	CABZ01078120.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr3_+_45365098 Show fit	0.09	ENSDART00000052746 ENSDART00000156555	ube2ia Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2Ia
chr11_-_29563437 Show fit	0.09	ENSDART00000163958	arhgef10la Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rho guanine nucleotide exchange factor (GEF) 10-like a
chr19_-_20403318 Show fit	0.09	ENSDART00000136826	dazl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	deleted in azoospermia-like
chr18_-_33979422 Show fit	0.08	ENSDART00000136535 ENSDART00000167698	si:ch211-203b20.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-203b20.7
chr14_-_2364761 Show fit	0.08	ENSDART00000167322	PCDHGC3 (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-233f7.3
chr10_+_40660772 Show fit	0.08	ENSDART00000148007	taar19l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	trace amine associated receptor 19l
chr19_+_46237665 Show fit	0.07	ENSDART00000159391	vps28 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vacuolar protein sorting 28 (yeast)
chr16_-_27628994 Show fit	0.07	ENSDART00000157407	nacad Links NCBI UniProt ZFIN ENSEMBL Google Show fit	NAC alpha domain containing
chr13_+_38990939 Show fit	0.07	ENSDART00000145979	col19a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen, type XIX, alpha 1
chr7_-_23768234 Show fit	0.06	ENSDART00000173981	si:ch211-200p22.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-200p22.4
chr11_+_33312601 Show fit	0.04	ENSDART00000188024	cntnap5l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	contactin associated protein-like 5 like
chr6_-_14292307 Show fit	0.04	ENSDART00000177852 ENSDART00000061745	inpp4ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	inositol polyphosphate-4-phosphatase type I Ab
chr15_-_6247775 Show fit	0.04	ENSDART00000148350	dscamb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Down syndrome cell adhesion molecule b
chr16_+_42471455 Show fit	0.03	ENSDART00000166640	si:ch211-215k15.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-215k15.5
chr15_-_8665662 Show fit	0.03	ENSDART00000090675	arhgap35a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rho GTPase activating protein 35a
chr10_+_40756352 Show fit	0.03	ENSDART00000156210 ENSDART00000144576	taar19f Links NCBI UniProt ZFIN ENSEMBL Google Show fit	trace amine associated receptor 19f
chr10_-_36253958 Show fit	0.03	ENSDART00000126288	or110-2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	odorant receptor, family D, subfamily 110, member 2
chr6_+_23887314 Show fit	0.03	ENSDART00000163188	znf648 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 648
chr15_+_30323491 Show fit	0.03	ENSDART00000048847	nos2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nitric oxide synthase 2b, inducible
chr12_-_33579873 Show fit	0.03	ENSDART00000184661	tdrkh Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tudor and KH domain containing
chr20_+_30490682 Show fit	0.02	ENSDART00000184871	myt1la Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myelin transcription factor 1-like, a
chr18_-_25568994 Show fit	0.02	ENSDART00000133029	si:ch211-13k12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-13k12.2
chr21_+_28478663 Show fit	0.02	ENSDART00000077887 ENSDART00000134150	slc22a6l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 22 (organic anion transporter), member 6, like
chr17_-_44247707 Show fit	0.02	ENSDART00000126097	otx2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	orthodenticle homeobox 2b
chr6_-_44711942 Show fit	0.01	ENSDART00000055035	cntn3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	contactin 3b
chr19_-_19379084 Show fit	0.01	ENSDART00000165206	smarcc1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b
chr9_+_24008879 Show fit	0.01	ENSDART00000190419 ENSDART00000191843 ENSDART00000148226	mlphb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	melanophilin b
chr15_-_5172170 Show fit	0.00	ENSDART00000062830	or126-5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	odorant receptor, family E, subfamily 126, member 5

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.2	3.5	GO:0039015	spinal cord anterior/posterior patterning(GO:0021512) cell proliferation involved in pronephros development(GO:0039015) cell proliferation involved in kidney development(GO:0072111)
0.8	3.8	GO:0016338	calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)
0.7	2.0	GO:1900157	negative regulation of chondrocyte differentiation(GO:0032331) negative regulation of cartilage development(GO:0061037) negative regulation of chondrocyte development(GO:0061182) regulation of bone mineralization involved in bone maturation(GO:1900157) negative regulation of bone mineralization involved in bone maturation(GO:1900158) negative regulation of bone development(GO:1903011)
0.6	2.3	GO:0060074	synapse maturation(GO:0060074)
0.5	2.1	GO:0030718	germ-line stem cell population maintenance(GO:0030718)
0.5	2.4	GO:0051145	smooth muscle cell differentiation(GO:0051145) negative regulation of muscle cell differentiation(GO:0051148)
0.3	3.1	GO:0006607	NLS-bearing protein import into nucleus(GO:0006607)
0.3	1.5	GO:0071305	vitamin D3 metabolic process(GO:0070640) cellular response to vitamin D(GO:0071305)
0.2	0.5	GO:0060623	regulation of chromosome condensation(GO:0060623)
0.1	0.5	GO:0018343	protein farnesylation(GO:0018343)
0.1	2.3	GO:0006995	cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.1	2.0	GO:0035803	binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.1	1.5	GO:0036353	histone H2A-K119 monoubiquitination(GO:0036353)
0.1	1.0	GO:0035677	posterior lateral line neuromast hair cell development(GO:0035677)
0.1	4.0	GO:1904029	regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029)
0.1	0.5	GO:0003222	ventricular trabecula myocardium morphogenesis(GO:0003222) trabecula formation(GO:0060343) heart trabecula formation(GO:0060347) skin epidermis development(GO:0098773)
0.1	1.5	GO:0006825	copper ion transport(GO:0006825)
0.1	1.2	GO:0098943	neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943)
0.1	0.9	GO:0015693	magnesium ion transport(GO:0015693)
0.1	1.9	GO:0050821	protein stabilization(GO:0050821)
0.1	0.8	GO:0035493	SNARE complex assembly(GO:0035493)
0.1	1.5	GO:0006506	GPI anchor biosynthetic process(GO:0006506)
0.1	0.6	GO:0070979	protein K11-linked ubiquitination(GO:0070979)
0.1	0.4	GO:0097340	inhibition of cysteine-type endopeptidase activity(GO:0097340) zymogen inhibition(GO:0097341)
0.0	2.3	GO:0070098	chemokine-mediated signaling pathway(GO:0070098)
0.0	0.6	GO:0030214	hyaluronan catabolic process(GO:0030214)
0.0	0.5	GO:0060573	ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573)
0.0	0.2	GO:0016322	neuron remodeling(GO:0016322)
0.0	0.3	GO:0032024	positive regulation of insulin secretion(GO:0032024)
0.0	0.5	GO:0050728	negative regulation of inflammatory response(GO:0050728)
0.0	0.2	GO:0048755	branching morphogenesis of a nerve(GO:0048755)
0.0	0.8	GO:0032008	positive regulation of TOR signaling(GO:0032008)
0.0	0.2	GO:0070207	protein homotrimerization(GO:0070207)
0.0	1.7	GO:0001706	endoderm formation(GO:0001706)
0.0	0.8	GO:0051014	actin filament severing(GO:0051014)
0.0	0.7	GO:0032482	Rab protein signal transduction(GO:0032482)
0.0	0.1	GO:0036306	embryonic heart tube elongation(GO:0036306)
0.0	2.5	GO:0017148	negative regulation of translation(GO:0017148)
0.0	2.6	GO:0048545	response to steroid hormone(GO:0048545)
0.0	0.5	GO:0010499	proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0	0.7	GO:0007006	mitochondrial membrane organization(GO:0007006)
0.0	0.3	GO:0018149	peptide cross-linking(GO:0018149)
0.0	0.3	GO:0006491	N-glycan processing(GO:0006491)
0.0	0.7	GO:0044744	protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744) single-organism nuclear import(GO:1902593)
0.0	0.7	GO:0006730	one-carbon metabolic process(GO:0006730)
0.0	0.8	GO:0006497	protein lipidation(GO:0006497)
0.0	0.5	GO:0001841	neural tube formation(GO:0001841)
0.0	0.2	GO:1990126	retrograde transport, endosome to plasma membrane(GO:1990126)
0.0	0.9	GO:0046839	phospholipid dephosphorylation(GO:0046839)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.3	4.0	GO:0097124	cyclin A2-CDK2 complex(GO:0097124)
1.2	3.5	GO:0097189	apoptotic body(GO:0097189)
0.3	1.5	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506)
0.2	0.8	GO:1990131	EGO complex(GO:0034448) Gtr1-Gtr2 GTPase complex(GO:1990131)
0.1	0.5	GO:0005965	protein farnesyltransferase complex(GO:0005965)
0.1	0.9	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.1	0.7	GO:0032593	insulin-responsive compartment(GO:0032593)
0.1	2.3	GO:0000421	autophagosome membrane(GO:0000421)
0.1	1.5	GO:0035102	PRC1 complex(GO:0035102)
0.1	0.8	GO:0045180	basal cortex(GO:0045180)
0.1	2.1	GO:0010494	cytoplasmic stress granule(GO:0010494)
0.1	2.3	GO:0005881	cytoplasmic microtubule(GO:0005881)
0.0	2.0	GO:0031970	mitochondrial intermembrane space(GO:0005758) organelle envelope lumen(GO:0031970)
0.0	0.5	GO:0019773	proteasome core complex, alpha-subunit complex(GO:0019773)
0.0	2.4	GO:0032432	actin filament bundle(GO:0032432)
0.0	4.2	GO:0005923	bicellular tight junction(GO:0005923) occluding junction(GO:0070160)
0.0	0.2	GO:0043083	synaptic cleft(GO:0043083)
0.0	1.3	GO:0098839	postsynaptic density membrane(GO:0098839) postsynaptic specialization membrane(GO:0099634)
0.0	0.6	GO:0043186	P granule(GO:0043186)
0.0	0.2	GO:0030122	AP-2 adaptor complex(GO:0030122)
0.0	0.1	GO:0005854	nascent polypeptide-associated complex(GO:0005854)
0.0	0.8	GO:0001726	ruffle(GO:0001726)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.9	9.6	GO:0009374	biotin binding(GO:0009374)
0.5	2.0	GO:0031005	filamin binding(GO:0031005)
0.5	1.9	GO:0043891	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.4	2.0	GO:0016531	copper chaperone activity(GO:0016531)
0.3	0.8	GO:0019777	Atg12 transferase activity(GO:0019777)
0.2	0.7	GO:0071077	coenzyme A transmembrane transporter activity(GO:0015228) adenosine 3',5'-bisphosphate transmembrane transporter activity(GO:0071077) AMP transmembrane transporter activity(GO:0080122)
0.2	3.8	GO:0061608	nuclear import signal receptor activity(GO:0061608)
0.2	1.5	GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.2	2.9	GO:0008266	poly(U) RNA binding(GO:0008266)
0.2	2.0	GO:0035804	structural constituent of egg coat(GO:0035804)
0.1	2.3	GO:0031729	CCR1 chemokine receptor binding(GO:0031726) CCR4 chemokine receptor binding(GO:0031729)
0.1	0.5	GO:0004660	protein farnesyltransferase activity(GO:0004660)
0.1	1.2	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1	2.3	GO:0019894	kinesin binding(GO:0019894)
0.1	0.5	GO:0032052	bile acid binding(GO:0032052)
0.1	3.3	GO:0005109	frizzled binding(GO:0005109)
0.1	4.0	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1	1.5	GO:1990841	promoter-specific chromatin binding(GO:1990841)
0.1	1.8	GO:0000030	mannosyltransferase activity(GO:0000030)
0.1	0.4	GO:0010859	calcium-dependent cysteine-type endopeptidase inhibitor activity(GO:0010859)
0.0	0.3	GO:0004692	cGMP-dependent protein kinase activity(GO:0004692)
0.0	0.9	GO:0015095	magnesium ion transmembrane transporter activity(GO:0015095)
0.0	0.6	GO:0004415	hyalurononglucosaminidase activity(GO:0004415)
0.0	0.2	GO:0044736	acid-sensing ion channel activity(GO:0044736)
0.0	2.1	GO:0003727	single-stranded RNA binding(GO:0003727)
0.0	7.4	GO:0042802	identical protein binding(GO:0042802)
0.0	2.3	GO:0031625	ubiquitin protein ligase binding(GO:0031625)
0.0	0.2	GO:0001665	alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.0	0.3	GO:0015924	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571) mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.0	0.5	GO:0005080	protein kinase C binding(GO:0005080)
0.0	0.7	GO:0004089	carbonate dehydratase activity(GO:0004089)
0.0	1.5	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712)
0.0	0.1	GO:0061656	SUMO conjugating enzyme activity(GO:0061656)
0.0	0.1	GO:0099530	G-protein coupled receptor activity involved in regulation of postsynaptic membrane potential(GO:0099530)
0.0	0.5	GO:0008195	phosphatidate phosphatase activity(GO:0008195)
0.0	0.3	GO:0003810	protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.0	4.7	GO:0003729	mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0	1.2	GO:0005245	voltage-gated calcium channel activity(GO:0005245)
0.0	0.6	GO:0061631	ubiquitin conjugating enzyme activity(GO:0061631)
0.0	0.1	GO:0004706	JUN kinase kinase kinase activity(GO:0004706)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	4.0	SA REG CASCADE OF CYCLIN EXPR	Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.1	5.4	WNT SIGNALING	Genes related to Wnt-mediated signal transduction
0.1	1.5	PID PRL SIGNALING EVENTS PATHWAY	Signaling events mediated by PRL
0.0	0.5	PID RXR VDR PATHWAY	RXR and RAR heterodimerization with other nuclear receptor
0.0	0.5	PID RHOA PATHWAY	RhoA signaling pathway
0.0	0.4	PID ECADHERIN KERATINOCYTE PATHWAY	E-cadherin signaling in keratinocytes
0.0	0.5	PID AURORA B PATHWAY	Aurora B signaling
0.0	0.2	PID ARF 3PATHWAY	Arf1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	4.0	REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION	Genes involved in Cyclin A/B1 associated events during G2/M transition
0.1	0.5	REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION	Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
0.1	1.9	REACTOME GLYCOLYSIS	Genes involved in Glycolysis
0.1	1.5	REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI	Genes involved in Synthesis of glycosylphosphatidylinositol (GPI)
0.1	1.5	REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE	Genes involved in Cytochrome P450 - arranged by substrate type
0.1	1.8	REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN	Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0	0.8	REACTOME SIGNALING BY FGFR1 FUSION MUTANTS	Genes involved in Signaling by FGFR1 fusion mutants
0.0	0.2	REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS	Genes involved in Termination of O-glycan biosynthesis
0.0	0.2	REACTOME RETROGRADE NEUROTROPHIN SIGNALLING	Genes involved in Retrograde neurotrophin signalling
0.0	0.7	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
0.0	0.5	REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES	Genes involved in Cross-presentation of soluble exogenous antigens (endosomes)
0.0	1.8	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation