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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for meox1

Z-value: 0.65

Motif logo

Transcription factors associated with meox1

Gene Symbol Gene ID Gene Info
ENSDARG00000007891 mesenchyme homeobox 1
ENSDARG00000115382 mesenchyme homeobox 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
meox1dr11_v1_chr12_+_27462225_27462225-0.952.8e-09Click!

Activity profile of meox1 motif

Sorted Z-values of meox1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr18_-_40708537 2.91 ENSDART00000077577
si:ch211-132b12.8
chr6_+_28208973 2.62 ENSDART00000171216
ENSDART00000171377
ENSDART00000167389
ENSDART00000166988
si:ch73-14h10.2
chr11_-_44801968 2.51 ENSDART00000161846
microtubule-associated protein 1 light chain 3 gamma
chr11_-_1550709 2.45 ENSDART00000110097
si:ch73-303b9.1
chr23_+_2728095 2.42 ENSDART00000066086
zgc:114123
chr8_-_23780334 2.39 ENSDART00000145179
ENSDART00000145894
zgc:195245
chr10_-_34002185 2.39 ENSDART00000046599
zygote arrest 1-like
chr2_-_15324837 2.30 ENSDART00000015655
trans-2,3-enoyl-CoA reductase-like 2b
chr4_-_77125693 2.26 ENSDART00000174256

chr2_-_50225411 2.25 ENSDART00000147117
ENSDART00000000042
MCM6 minichromosome maintenance deficient 6, like
chr20_-_6532462 2.12 ENSDART00000054653
MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like
chr10_-_21362071 2.07 ENSDART00000125167
avidin
chr6_+_21001264 2.04 ENSDART00000044519
ENSDART00000151278
connexin 44.2
chr4_-_77140030 1.98 ENSDART00000174332
ENSDART00000190394
ENSDART00000189208


chr9_-_35633827 1.98 ENSDART00000077745
zona pellucida glycoprotein 2, like 1
chr10_-_21545091 1.95 ENSDART00000029122
ENSDART00000132207
zgc:165539
chr10_-_21362320 1.93 ENSDART00000189789
avidin
chr11_-_6452444 1.72 ENSDART00000137879
ENSDART00000134957
ENSDART00000004483
La ribonucleoprotein domain family, member 6b
chr20_-_23426339 1.58 ENSDART00000004625
zygote arrest 1
chr17_+_16046132 1.39 ENSDART00000155005
si:ch73-204p21.2
chr12_-_33357655 1.36 ENSDART00000066233
ENSDART00000148165
solute carrier family 16 (monocarboxylate transporter), member 3
chr4_+_13586689 1.36 ENSDART00000067161
ENSDART00000138201
transportin 3
chr2_+_15048410 1.35 ENSDART00000058484
calponin 3, acidic b
chr14_-_33481428 1.32 ENSDART00000147059
ENSDART00000140001
ENSDART00000124242
ENSDART00000164836
ENSDART00000190104
ENSDART00000186833
ENSDART00000180873
lysosomal-associated membrane protein 2
chr17_+_16046314 1.28 ENSDART00000154554
ENSDART00000154338
ENSDART00000155336
si:ch73-204p21.2
chr22_+_17828267 1.27 ENSDART00000136016
hyaluronan and proteoglycan link protein 4
chr19_-_18127808 1.25 ENSDART00000108627
sorting nexin 10a
chr10_+_16036246 1.19 ENSDART00000141586
ENSDART00000135868
ENSDART00000065037
ENSDART00000124502
lamin B1
chr11_-_23687158 1.17 ENSDART00000189599
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
chr19_-_18127629 1.12 ENSDART00000187722
sorting nexin 10a
chr10_-_35257458 1.10 ENSDART00000143890
ENSDART00000139107
ENSDART00000082445
proline rich 11
chr20_-_38787047 1.02 ENSDART00000152913
ENSDART00000153430
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a
chr14_+_34490445 1.01 ENSDART00000132193
ENSDART00000148044
wingless-type MMTV integration site family, member 8a
chr20_+_29209926 0.99 ENSDART00000152949
ENSDART00000153016
katanin p80 subunit B-like 1
chr2_-_21819421 0.98 ENSDART00000121586
chromodomain helicase DNA binding protein 7
chr20_-_38787341 0.95 ENSDART00000136771
DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a
chr4_+_13586455 0.95 ENSDART00000187230
transportin 3
chr2_-_26596794 0.94 ENSDART00000134685
ENSDART00000056787
zgc:113691
chr11_-_34219211 0.93 ENSDART00000098472
transmembrane protein 44
chr2_+_6253246 0.93 ENSDART00000058256
ENSDART00000076700
zona pellucida glycoprotein 3b
chr10_-_44560165 0.91 ENSDART00000181217
ENSDART00000076084
nucleophosmin/nucleoplasmin, 2b
chr15_-_1038193 0.90 ENSDART00000159462
si:dkey-77f5.3
chr1_-_23308225 0.89 ENSDART00000137567
ENSDART00000008201
small integral membrane protein 14
chr16_+_40043673 0.88 ENSDART00000102552
ENSDART00000125484
tRNA methyltransferase 11 homolog (S. cerevisiae)
chr10_+_8197827 0.87 ENSDART00000026244
Mtr4 exosome RNA helicase
chr20_+_29209767 0.87 ENSDART00000141252
katanin p80 subunit B-like 1
chr7_-_59165640 0.86 ENSDART00000170853
HAUS augmin-like complex, subunit 6
chr9_-_38021889 0.83 ENSDART00000183482
ENSDART00000124333
adenylate cyclase 5
chr13_+_38814521 0.81 ENSDART00000110976
collagen, type XIX, alpha 1
chr22_-_21897203 0.80 ENSDART00000158501
ENSDART00000105566
ENSDART00000136795
guanine nucleotide binding protein (G protein), alpha 11a (Gq class)
chr17_+_21902058 0.79 ENSDART00000142178
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1a
chr3_-_26806032 0.79 ENSDART00000143710
phosphatidylinositol glycan anchor biosynthesis, class Q
chr2_+_1714640 0.76 ENSDART00000086761
ENSDART00000111613
adhesion G protein-coupled receptor L2b, tandem duplicate 1
adhesion G protein-coupled receptor L2b, tandem duplicate 1
chr25_-_6049339 0.76 ENSDART00000075184
sorting nexin 1a
chr8_-_15129573 0.73 ENSDART00000142358
BCAR3, NSP family adaptor protein
chr20_+_29209615 0.73 ENSDART00000062350
katanin p80 subunit B-like 1
chr19_+_4968947 0.73 ENSDART00000003634
ENSDART00000134808
StAR-related lipid transfer (START) domain containing 3
chr8_-_30338872 0.71 ENSDART00000137583
dedicator of cytokinesis 8
chr20_+_46620374 0.71 ENSDART00000005548
basic leucine zipper transcription factor, ATF-like
chr23_-_36446307 0.71 ENSDART00000136623
zgc:174906
chr8_-_25034411 0.71 ENSDART00000135973
nuclear transcription factor Y, alpha, like
chr15_+_21262917 0.71 ENSDART00000101000
glucuronokinase with putative uridyl pyrophosphorylase
chr6_-_12172424 0.67 ENSDART00000109344
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a
chr24_-_34680956 0.66 ENSDART00000171009
catenin (cadherin-associated protein), alpha 1
chr12_+_22580579 0.65 ENSDART00000171725
ENSDART00000192290
capping protein (actin filament), gelsolin-like b
chr5_-_30074332 0.64 ENSDART00000147963
beta-carotene oxygenase 2a
chr20_-_20931197 0.64 ENSDART00000152726
BTB (POZ) domain containing 6b
chr6_-_37744430 0.61 ENSDART00000150177
ENSDART00000149722
non imprinted in Prader-Willi/Angelman syndrome 2 (human)
chr17_+_49500820 0.61 ENSDART00000170306
apoptosis resistant E3 ubiquitin protein ligase 1
chr10_+_7709724 0.60 ENSDART00000097670
gamma-glutamyl carboxylase
chr15_+_29140126 0.60 ENSDART00000060034
zgc:113149
chr23_-_10175898 0.59 ENSDART00000146185
keratin 5
chr24_-_25004553 0.58 ENSDART00000080997
ENSDART00000136860
zinc finger, DHHC-type containing 20b
chr25_+_35891342 0.57 ENSDART00000147093
LSM14A mRNA processing body assembly factor a
chr6_+_4370935 0.56 ENSDART00000192368
RNA binding motif protein 26
chr15_+_28410664 0.56 ENSDART00000132028
ENSDART00000057697
ENSDART00000057257
phosphatidylinositol transfer protein, alpha a
chr2_-_27619954 0.56 ENSDART00000144826
trimethylguanosine synthase 1
chr5_-_68093169 0.55 ENSDART00000051849
solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
chr7_-_64589920 0.53 ENSDART00000172619
ENSDART00000184113

chr3_-_26805455 0.52 ENSDART00000180648
phosphatidylinositol glycan anchor biosynthesis, class Q
chr20_-_20930926 0.51 ENSDART00000123909
BTB (POZ) domain containing 6b
chr13_+_38817871 0.50 ENSDART00000187708
collagen, type XIX, alpha 1
chr5_-_19006290 0.48 ENSDART00000137022
golgin A3
chr20_+_13403281 0.48 ENSDART00000045183
ENSDART00000127350
ectonucleotide pyrophosphatase/phosphodiesterase 1
chr4_-_2380173 0.47 ENSDART00000177727
nucleosome assembly protein 1-like 1
chr24_-_41320037 0.47 ENSDART00000129058
Ras homolog, mTORC1 binding
chr12_-_45238759 0.47 ENSDART00000154859
tripartite motif containing 65
chr19_-_19871211 0.46 ENSDART00000170980
even-skipped homeobox 1
chr17_-_41798856 0.45 ENSDART00000156031
ENSDART00000192801
ENSDART00000180172
ENSDART00000084745
ENSDART00000175577
Ral GTPase activating protein, alpha subunit 2 (catalytic)
chr6_-_40713183 0.45 ENSDART00000157113
ENSDART00000154810
ENSDART00000153702
si:ch211-157b11.12
chr9_+_43799829 0.45 ENSDART00000186240
ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
chr20_-_37813863 0.45 ENSDART00000147529
basic leucine zipper transcription factor, ATF-like 3
chr10_+_2582254 0.45 ENSDART00000016103
nucleoredoxin like 2
chr11_+_31864921 0.44 ENSDART00000180252
diaphanous-related formin 3
chr17_+_37227936 0.44 ENSDART00000076009
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b
chr24_+_16547035 0.44 ENSDART00000164319
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr12_+_48803098 0.44 ENSDART00000074768
peptidylprolyl isomerase Fb
chr12_+_46582727 0.44 ENSDART00000149326
Usher syndrome 1Gb (autosomal recessive)
chr7_+_69459759 0.43 ENSDART00000160500
CTD nuclear envelope phosphatase 1b
chr23_+_33963619 0.43 ENSDART00000140666
ENSDART00000084792
pyridoxal phosphate binding protein
chr12_-_11560794 0.43 ENSDART00000149098
ENSDART00000169975
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b
chr3_-_31254979 0.43 ENSDART00000130280
actinoporin-like protein
chr23_-_31913069 0.43 ENSDART00000135526
mitochondrial fission regulator 2
chr24_+_39518774 0.42 ENSDART00000132939
defective in cullin neddylation 1 domain containing 3
chr7_-_7764287 0.42 ENSDART00000173021
ENSDART00000113131
inturned planar cell polarity protein
chr24_+_36204028 0.42 ENSDART00000063832
ENSDART00000155260
retinoblastoma binding protein 8
chr5_+_40837539 0.41 ENSDART00000188279
si:dkey-3h3.3
chr14_-_48961056 0.41 ENSDART00000124192
si:dkeyp-121d2.7
chr19_-_20430892 0.41 ENSDART00000111409
TBC1 domain family, member 5
chr2_-_32825917 0.41 ENSDART00000180409
pre-mRNA processing factor 4Ba
chr10_-_41400049 0.40 ENSDART00000009838
glycerol-3-phosphate acyltransferase 4
chr4_-_16124417 0.40 ENSDART00000128079
ENSDART00000077664
ATPase plasma membrane Ca2+ transporting 1a
chr18_-_15551360 0.38 ENSDART00000159915
ENSDART00000172690
PTPRF interacting protein, binding protein 1b (liprin beta 1)
chr23_+_7548797 0.38 ENSDART00000006765
transmembrane 9 superfamily protein member 4
chr12_-_4408828 0.38 ENSDART00000152447
si:ch211-173d10.1
chr12_-_28349026 0.37 ENSDART00000183768
ENSDART00000152998
zgc:195081
chr6_+_54576520 0.37 ENSDART00000093199
ENSDART00000127519
ENSDART00000157142
TEA domain family member 3 b
chr8_-_21142550 0.37 ENSDART00000143192
ENSDART00000186820
ENSDART00000135938
carnitine palmitoyltransferase 2
chr20_-_28800999 0.37 ENSDART00000049462
RAB15, member RAS oncogene family
chr17_-_21162821 0.36 ENSDART00000157283
abhydrolase domain containing 12
chr5_-_23117078 0.36 ENSDART00000051529
uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
chr23_-_900795 0.36 ENSDART00000190517
ENSDART00000182849
ENSDART00000111456
ENSDART00000185430
RNA binding motif protein 10
chr2_-_32826108 0.36 ENSDART00000098834
pre-mRNA processing factor 4Ba
chr22_-_881725 0.35 ENSDART00000035514
choline/ethanolamine phosphotransferase 1b
chr14_-_14640401 0.35 ENSDART00000168027
ENSDART00000167521
zinc finger protein 185 with LIM domain
chr4_+_25917915 0.35 ENSDART00000138603
vezatin, adherens junctions transmembrane protein
chr2_-_28671139 0.35 ENSDART00000165272
ENSDART00000164657
7-dehydrocholesterol reductase
chr6_-_48418021 0.33 ENSDART00000090528
ras homolog family member Ca
chr3_+_45364849 0.33 ENSDART00000153974
ubiquitin-conjugating enzyme E2Ia
chr11_+_44135351 0.33 ENSDART00000182914

chr19_+_8612839 0.32 ENSDART00000144925
sorting nexin family member 27a
chr19_+_12406583 0.32 ENSDART00000013865
ENSDART00000151535
SEH1-like (S. cerevisiae)
chr1_-_53468160 0.32 ENSDART00000143349
zgc:66455
chr5_+_19314574 0.32 ENSDART00000133247
RUN and SH3 domain containing 2
chr9_-_5318873 0.32 ENSDART00000129308
activin A receptor type 1C
chr15_-_34930727 0.31 ENSDART00000179723
DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr15_-_9272328 0.31 ENSDART00000172114
calmodulin 2a (phosphorylase kinase, delta)
chr23_+_4741543 0.30 ENSDART00000144761
Raf-1 proto-oncogene, serine/threonine kinase a
chr20_-_45060241 0.30 ENSDART00000185227
kelch-like family member 29
chr19_-_32641725 0.28 ENSDART00000165006
ENSDART00000188185
hippocalcin
chr6_-_2134581 0.27 ENSDART00000175478
V-set and transmembrane domain containing 2 like
chr18_+_8833251 0.26 ENSDART00000143519
IMP (inosine 5'-monophosphate) dehydrogenase 1a
chr11_+_39107131 0.26 ENSDART00000105140
zgc:112255
chr25_+_10410620 0.25 ENSDART00000151886
ets homologous factor
chr11_-_14813029 0.25 ENSDART00000004920
ENSDART00000122645
small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha
chr20_-_23226453 0.24 ENSDART00000142721
DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
chr3_-_31254379 0.24 ENSDART00000189376
actinoporin-like protein
chr18_+_8402129 0.23 ENSDART00000081154
ENSDART00000171974
PRP18 pre-mRNA processing factor 18 homolog (yeast)
chr21_-_3853204 0.23 ENSDART00000188829
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
chr20_-_9436521 0.23 ENSDART00000133000
zgc:101840
chr25_-_27722309 0.23 ENSDART00000148121
zgc:153935
chr13_+_18321140 0.22 ENSDART00000180947
eukaryotic translation initiation factor 4E family member 1c
chr9_-_3934963 0.22 ENSDART00000062336
ubiquitin protein ligase E3 component n-recognin 3
chr19_+_26423590 0.22 ENSDART00000136244
natriuretic peptide receptor 1a
chr17_+_12813316 0.21 ENSDART00000155629
Ral GTPase activating protein, alpha subunit 1 (catalytic)
chr16_-_40043322 0.20 ENSDART00000145278
si:dkey-29b11.3
chr23_+_42254960 0.20 ENSDART00000102980
zinc finger, CCHC domain containing 11
chr9_-_43538328 0.20 ENSDART00000140526
zinc finger protein 385B
chr9_+_17983463 0.19 ENSDART00000182150
A kinase (PRKA) anchor protein 11
chr3_+_27786601 0.19 ENSDART00000086994
N-acetyltransferase 15 (GCN5-related, putative)
chr17_-_37395460 0.19 ENSDART00000148160
ENSDART00000075975
cysteine-rich protein 1
chr11_+_45323455 0.19 ENSDART00000189249
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Gb
chr1_+_51191049 0.19 ENSDART00000132244
ENSDART00000014970
ENSDART00000132141
BTB (POZ) domain containing 3a
chr12_+_30367371 0.19 ENSDART00000153364
si:ch211-225b10.4
chr7_-_12464412 0.18 ENSDART00000178723
ADAMTS-like 3
chr7_+_21841037 0.18 ENSDART00000077503
transmembrane 4 L six family member 5
chr8_+_17884569 0.18 ENSDART00000134660
solute carrier family 44, member 5b
chr23_-_18130264 0.18 ENSDART00000016976
nuclear casein kinase and cyclin-dependent kinase substrate 1b
chr4_+_9177997 0.18 ENSDART00000057254
ENSDART00000154614
nuclear transcription factor Y, beta a
chr22_+_16308450 0.18 ENSDART00000105678
leucine rich repeat containing 39
chr25_-_27722614 0.18 ENSDART00000190154
zgc:153935
chr25_-_4713461 0.17 ENSDART00000155302
dopamine receptor D4a
chr15_-_18432673 0.17 ENSDART00000146853
neural cell adhesion molecule 1b
chr6_-_55585423 0.16 ENSDART00000157129
solute carrier family 12 (potassium/chloride transporter), member 5a
chr6_-_43283122 0.15 ENSDART00000186022
FERM domain containing 4Ba
chr8_+_52314542 0.15 ENSDART00000013059
ENSDART00000125241
drebrin-like b
chr19_+_15521997 0.14 ENSDART00000003164
protein phosphatase 1, regulatory subunit 8a
chr24_+_32592748 0.14 ENSDART00000188256
si:ch211-282b22.1
chr9_+_54695981 0.14 ENSDART00000183605
RAB9A, member RAS oncogene family
chr22_-_3564563 0.13 ENSDART00000145114
protein tyrosine phosphatase, receptor type, s, a
chr11_-_36341028 0.13 ENSDART00000146093
sortilin 1a
chr7_-_30174882 0.13 ENSDART00000110409
FERM domain containing 5
chr3_+_45365098 0.13 ENSDART00000052746
ENSDART00000156555
ubiquitin-conjugating enzyme E2Ia
chr15_+_31344472 0.13 ENSDART00000146695
ENSDART00000159182
ENSDART00000060125
odorant receptor, family D, subfamily 107, member 1
chr3_-_16719244 0.13 ENSDART00000055859
polymerase (DNA directed), delta 1, catalytic subunit
chr3_+_25087605 0.12 ENSDART00000138578
ST13, Hsp70 interacting protein
chr4_-_73587205 0.12 ENSDART00000150837
zinc finger protein 1015
chr18_+_9637744 0.11 ENSDART00000190171
piccolo presynaptic cytomatrix protein b
chr2_-_39558643 0.11 ENSDART00000139860
ENSDART00000145231
ENSDART00000141721
cerebellin 7
chr5_+_20147830 0.11 ENSDART00000098727
SV2 related protein a
chr15_+_5280858 0.10 ENSDART00000174242
odorant receptor, family E, subfamily 121, member 1
chr12_+_30367079 0.10 ENSDART00000190112
si:ch211-225b10.4
chr20_-_29864390 0.10 ENSDART00000161834
ENSDART00000132278
ring finger protein 144ab
chr19_+_47476908 0.10 ENSDART00000157886
zgc:114119
chr21_-_3770636 0.10 ENSDART00000053596
secretory carrier membrane protein 1
chr8_+_6576940 0.10 ENSDART00000138135
V-set and immunoglobulin domain containing 8b
chr7_+_54642005 0.10 ENSDART00000171864
fibroblast growth factor 19
chr23_-_31913231 0.09 ENSDART00000146852
ENSDART00000085054
mitochondrial fission regulator 2
chr21_+_11244068 0.09 ENSDART00000163432
AT-rich interaction domain 6
chr20_+_23185530 0.09 ENSDART00000142346
leucine rich repeat containing 66

Network of associatons between targets according to the STRING database.

First level regulatory network of meox1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.4 GO:0070986 left/right axis specification(GO:0070986)
0.4 4.4 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.3 1.0 GO:0021512 spinal cord anterior/posterior patterning(GO:0021512) cell proliferation involved in pronephros development(GO:0039015) cell proliferation involved in kidney development(GO:0072111)
0.3 2.4 GO:0040038 meiotic cytokinesis(GO:0033206) polar body extrusion after meiotic divisions(GO:0040038)
0.2 0.7 GO:0042832 response to protozoan(GO:0001562) defense response to protozoan(GO:0042832)
0.1 0.4 GO:0045002 double-strand break repair via single-strand annealing(GO:0045002)
0.1 2.4 GO:0006995 cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.1 0.8 GO:0034498 early endosome to Golgi transport(GO:0034498)
0.1 1.3 GO:0006622 protein targeting to lysosome(GO:0006622)
0.1 0.5 GO:0036306 embryonic heart tube elongation(GO:0036306)
0.1 0.7 GO:0051883 killing of cells of other organism(GO:0031640) disruption of cells of other organism(GO:0044364) disruption of cells of other organism involved in symbiotic interaction(GO:0051818) killing of cells in other organism involved in symbiotic interaction(GO:0051883)
0.1 0.6 GO:0015729 thiosulfate transport(GO:0015709) oxaloacetate transport(GO:0015729) malate transport(GO:0015743) succinate transport(GO:0015744) succinate transmembrane transport(GO:0071422) malate transmembrane transport(GO:0071423)
0.1 0.6 GO:0017187 peptidyl-glutamic acid carboxylation(GO:0017187) protein carboxylation(GO:0018214)
0.1 0.5 GO:0045598 regulation of fat cell differentiation(GO:0045598)
0.1 0.4 GO:0010866 regulation of triglyceride biosynthetic process(GO:0010866) positive regulation of triglyceride biosynthetic process(GO:0010867)
0.1 0.3 GO:1903644 regulation of protein folding(GO:1903332) positive regulation of protein folding(GO:1903334) regulation of chaperone-mediated protein folding(GO:1903644) positive regulation of chaperone-mediated protein folding(GO:1903646)
0.1 0.2 GO:2000434 regulation of protein neddylation(GO:2000434)
0.1 0.4 GO:0034505 tooth mineralization(GO:0034505)
0.1 0.2 GO:0000350 generation of catalytic spliceosome for second transesterification step(GO:0000350)
0.1 1.0 GO:0048796 rRNA transcription(GO:0009303) swim bladder maturation(GO:0048796) swim bladder inflation(GO:0048798)
0.1 0.4 GO:0046462 phosphatidylserine catabolic process(GO:0006660) monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.1 0.6 GO:0046247 carotene metabolic process(GO:0016119) carotene catabolic process(GO:0016121) terpene metabolic process(GO:0042214) terpene catabolic process(GO:0046247)
0.1 2.3 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.2 GO:0071236 cellular response to antibiotic(GO:0071236) cellular response to toxic substance(GO:0097237)
0.1 0.9 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.1 1.0 GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.0 0.4 GO:0050957 equilibrioception(GO:0050957)
0.0 0.8 GO:0045471 response to ethanol(GO:0045471)
0.0 0.3 GO:1902766 skeletal muscle satellite cell migration(GO:1902766)
0.0 0.5 GO:0072498 embryonic skeletal joint development(GO:0072498)
0.0 2.3 GO:0030217 T cell differentiation(GO:0030217)
0.0 0.2 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.0 1.3 GO:0006506 GPI anchor biosynthetic process(GO:0006506)
0.0 0.4 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.4 GO:0070301 cellular response to hydrogen peroxide(GO:0070301)
0.0 0.6 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.3 GO:0051315 attachment of mitotic spindle microtubules to kinetochore(GO:0051315)
0.0 0.4 GO:0045116 protein neddylation(GO:0045116)
0.0 0.7 GO:0033138 positive regulation of peptidyl-serine phosphorylation(GO:0033138)
0.0 0.1 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.0 0.2 GO:0098974 postsynaptic actin cytoskeleton organization(GO:0098974)
0.0 0.3 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646)
0.0 0.2 GO:0017196 N-terminal peptidyl-methionine acetylation(GO:0017196)
0.0 0.6 GO:0060158 phospholipase C-activating dopamine receptor signaling pathway(GO:0060158)
0.0 0.2 GO:0045604 regulation of epidermal cell differentiation(GO:0045604)
0.0 0.5 GO:0035803 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0 0.3 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.9 GO:0000460 maturation of 5.8S rRNA(GO:0000460)
0.0 1.1 GO:0007050 cell cycle arrest(GO:0007050)
0.0 0.2 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.7 GO:0051014 actin filament severing(GO:0051014)
0.0 1.8 GO:0048846 axon extension involved in axon guidance(GO:0048846) neuron projection extension involved in neuron projection guidance(GO:1902284)
0.0 0.3 GO:0000186 activation of MAPKK activity(GO:0000186)
0.0 0.4 GO:0060173 limb development(GO:0060173)
0.0 0.5 GO:0032008 positive regulation of TOR signaling(GO:0032008)
0.0 0.8 GO:0030301 cholesterol transport(GO:0030301)
0.0 1.4 GO:0015718 monocarboxylic acid transport(GO:0015718)
0.0 0.1 GO:0006895 Golgi to endosome transport(GO:0006895)
0.0 0.5 GO:0032482 Rab protein signal transduction(GO:0032482)
0.0 0.6 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.5 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.4 GO:0035329 hippo signaling(GO:0035329)
0.0 0.3 GO:0042446 hormone biosynthetic process(GO:0042446)
0.0 1.6 GO:0017148 negative regulation of translation(GO:0017148)
0.0 0.3 GO:1990126 retrograde transport, endosome to plasma membrane(GO:1990126)
0.0 0.5 GO:0001878 response to yeast(GO:0001878)
0.0 0.2 GO:0048251 elastic fiber assembly(GO:0048251)
0.0 0.2 GO:0060038 cardiac muscle cell proliferation(GO:0060038)
0.0 0.9 GO:0007098 centrosome cycle(GO:0007098)
0.0 0.6 GO:0015914 phospholipid transport(GO:0015914)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0031310 integral component of vacuolar membrane(GO:0031166) intrinsic component of vacuolar membrane(GO:0031310)
0.3 1.0 GO:0097189 apoptotic body(GO:0097189)
0.2 4.4 GO:0042555 MCM complex(GO:0042555)
0.2 0.7 GO:0044216 other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) other organism cell membrane(GO:0044218) other organism membrane(GO:0044279)
0.2 1.3 GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex(GO:0000506)
0.2 0.9 GO:1990498 mitotic spindle microtubule(GO:1990498)
0.1 0.7 GO:0044232 organelle membrane contact site(GO:0044232)
0.1 0.4 GO:0071595 Nem1-Spo7 phosphatase complex(GO:0071595)
0.1 0.3 GO:0072380 TRC complex(GO:0072380)
0.1 0.9 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 2.4 GO:0000421 autophagosome membrane(GO:0000421)
0.1 0.8 GO:0030904 retromer complex(GO:0030904)
0.1 0.6 GO:0045095 keratin filament(GO:0045095)
0.0 0.6 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.4 GO:0032593 insulin-responsive compartment(GO:0032593)
0.0 0.3 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 0.5 GO:0031312 extrinsic component of organelle membrane(GO:0031312)
0.0 0.1 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 1.0 GO:0005942 phosphatidylinositol 3-kinase complex(GO:0005942)
0.0 0.1 GO:0042584 chromaffin granule membrane(GO:0042584)
0.0 0.1 GO:0030670 phagocytic vesicle membrane(GO:0030670)
0.0 0.3 GO:0030057 desmosome(GO:0030057)
0.0 0.9 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.4 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.2 GO:0005682 U5 snRNP(GO:0005682)
0.0 1.2 GO:0005882 intermediate filament(GO:0005882)
0.0 0.2 GO:0002102 podosome(GO:0002102)
0.0 0.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 2.4 GO:0010008 endosome membrane(GO:0010008)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 4.0 GO:0009374 biotin binding(GO:0009374)
0.4 2.2 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.2 0.9 GO:0004809 tRNA (guanine-N2-)-methyltransferase activity(GO:0004809)
0.2 1.3 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1 0.6 GO:0008488 gamma-glutamyl carboxylase activity(GO:0008488)
0.1 0.4 GO:0016509 long-chain-3-hydroxyacyl-CoA dehydrogenase activity(GO:0016509)
0.1 0.4 GO:0070336 flap-structured DNA binding(GO:0070336)
0.1 0.9 GO:0015189 L-lysine transmembrane transporter activity(GO:0015189)
0.1 0.5 GO:0061656 SUMO conjugating enzyme activity(GO:0061656)
0.1 1.4 GO:0015129 lactate transmembrane transporter activity(GO:0015129)
0.1 0.6 GO:0015131 thiosulfate transmembrane transporter activity(GO:0015117) oxaloacetate transmembrane transporter activity(GO:0015131) malate transmembrane transporter activity(GO:0015140)
0.1 2.1 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.8 GO:0031826 type 2A serotonin receptor binding(GO:0031826)
0.1 0.9 GO:0035804 structural constituent of egg coat(GO:0035804)
0.1 0.6 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 0.6 GO:0010436 beta-carotene 15,15'-monooxygenase activity(GO:0003834) carotenoid dioxygenase activity(GO:0010436)
0.1 0.3 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142) ethanolaminephosphotransferase activity(GO:0004307)
0.1 0.5 GO:0004528 phosphodiesterase I activity(GO:0004528)
0.1 1.0 GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005)
0.1 1.6 GO:0030165 PDZ domain binding(GO:0030165)
0.1 0.4 GO:0016416 carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416)
0.0 0.3 GO:0003938 IMP dehydrogenase activity(GO:0003938)
0.0 2.6 GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627)
0.0 1.3 GO:0005540 hyaluronic acid binding(GO:0005540)
0.0 0.7 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.8 GO:0004016 adenylate cyclase activity(GO:0004016)
0.0 0.6 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.2 GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.0 0.4 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.0 0.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.2 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.0 1.7 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.9 GO:0005109 frizzled binding(GO:0005109)
0.0 0.1 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.0 0.2 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.0 0.1 GO:0004865 protein serine/threonine phosphatase inhibitor activity(GO:0004865)
0.0 3.4 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.1 GO:0050699 WW domain binding(GO:0050699)
0.0 0.7 GO:0015485 cholesterol binding(GO:0015485)
0.0 1.0 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.7 GO:0008013 beta-catenin binding(GO:0008013)
0.0 0.5 GO:0019003 GDP binding(GO:0019003)
0.0 0.6 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.1 GO:0038132 neuregulin receptor activity(GO:0038131) neuregulin binding(GO:0038132)
0.0 0.3 GO:0031267 small GTPase binding(GO:0031267)
0.0 0.1 GO:0001223 transcription coactivator binding(GO:0001223)
0.0 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 1.3 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.0 0.4 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 PID LPA4 PATHWAY LPA4-mediated signaling events
0.0 1.3 NABA PROTEOGLYCANS Genes encoding proteoglycans
0.0 0.7 PID ECADHERIN KERATINOCYTE PATHWAY E-cadherin signaling in keratinocytes
0.0 0.4 PID TCR CALCIUM PATHWAY Calcium signaling in the CD4+ TCR pathway
0.0 1.3 NABA COLLAGENS Genes encoding collagen proteins
0.0 1.2 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 1.2 PID CASPASE PATHWAY Caspase cascade in apoptosis
0.0 0.6 PID WNT NONCANONICAL PATHWAY Noncanonical Wnt signaling pathway
0.0 1.0 WNT SIGNALING Genes related to Wnt-mediated signal transduction
0.0 0.4 PID ATM PATHWAY ATM pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS Genes involved in Bile salt and organic anion SLC transporters
0.1 0.5 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.1 0.8 REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY Genes involved in Adenylate cyclase activating pathway
0.1 1.3 REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI Genes involved in Synthesis of glycosylphosphatidylinositol (GPI)
0.1 0.6 REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins
0.0 1.2 REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS Genes involved in Apoptotic cleavage of cellular proteins
0.0 1.2 REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE Genes involved in Synthesis of PIPs at the plasma membrane
0.0 0.3 REACTOME SIGNALING BY NODAL Genes involved in Signaling by NODAL
0.0 0.7 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions
0.0 0.4 REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle
0.0 0.6 REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0 1.3 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.0 0.4 REACTOME OTHER SEMAPHORIN INTERACTIONS Genes involved in Other semaphorin interactions
0.0 0.2 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 0.6 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 1.3 REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 Genes involved in Response to elevated platelet cytosolic Ca2+
0.0 0.3 REACTOME CHOLESTEROL BIOSYNTHESIS Genes involved in Cholesterol biosynthesis
0.0 0.1 REACTOME FGFR4 LIGAND BINDING AND ACTIVATION Genes involved in FGFR4 ligand binding and activation
0.0 0.1 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.4 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination