PRJNA438478: RNAseq of wild type zebrafish germline

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
mafaa Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000044155	v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Aa

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mafaa	dr11_v1_chr6_-_32703317_32703317	-0.77	2.1e-04	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_+_19596214 Show fit	0.85	ENSDART00000183110	CABZ01059626.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr5_-_33230794 Show fit	0.47	ENSDART00000144273	kank1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	KN motif and ankyrin repeat domains 1b
chr6_-_33913184 Show fit	0.41	ENSDART00000146373	nasp Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear autoantigenic sperm protein (histone-binding)
chr12_+_30789611 Show fit	0.36	ENSDART00000181501	aldh18a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aldehyde dehydrogenase 18 family, member A1
chr7_+_27603211 Show fit	0.33	ENSDART00000148782	cyp2r1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome P450, family 2, subfamily R, polypeptide 1
chr21_-_17037907 Show fit	0.25	ENSDART00000101263	ube2g1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast)
chr17_-_20202725 Show fit	0.25	ENSDART00000133650	ecd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ecdysoneless homolog (Drosophila)
chr9_-_1639884 Show fit	0.22	ENSDART00000062850 ENSDART00000150947	agps Links NCBI UniProt ZFIN ENSEMBL Google Show fit	alkylglycerone phosphate synthase
chr22_+_5574952 Show fit	0.21	ENSDART00000171774	zgc:171566 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:171566
chr13_-_50463938 Show fit	0.18	ENSDART00000083857	ccnj Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin J
chr5_-_23795688 Show fit	0.17	ENSDART00000099084	gbgt1l4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4
chr19_-_48010490 Show fit	0.16	ENSDART00000159938	FBXL19 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:158376
chr15_-_17138640 Show fit	0.15	ENSDART00000080777	mrpl28 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial ribosomal protein L28
chr7_-_40578733 Show fit	0.14	ENSDART00000173926 ENSDART00000010035	dnajb6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DnaJ (Hsp40) homolog, subfamily B, member 6b
chr24_-_38079261 Show fit	0.14	ENSDART00000105662	crp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	C-reactive protein 1
chr1_-_26045007 Show fit	0.14	ENSDART00000129259	gpank1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G patch domain and ankyrin repeats 1
chr5_-_5326010 Show fit	0.14	ENSDART00000161946	pbx3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pre-B-cell leukemia homeobox 3a
chr2_-_57707039 Show fit	0.13	ENSDART00000097685	CABZ01060891.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr25_+_3217419 Show fit	0.12	ENSDART00000104859	rccd1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RCC1 domain containing 1
chr2_-_37465517 Show fit	0.12	ENSDART00000139983	si:dkey-57k2.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-57k2.6
chr25_-_4235037 Show fit	0.12	ENSDART00000093003	syt7a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin VIIa
chr21_-_1642739 Show fit	0.11	ENSDART00000151118	zgc:152948 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:152948
chr4_-_14486822 Show fit	0.11	ENSDART00000048821	plxnb2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	plexin b2a
chr24_+_37709191 Show fit	0.11	ENSDART00000066558	decr2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	2,4-dienoyl CoA reductase 2, peroxisomal
chr8_-_21071711 Show fit	0.10	ENSDART00000111600 ENSDART00000135204 ENSDART00000131371 ENSDART00000146532 ENSDART00000137606	zgc:112962 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:112962
chr8_-_21071476 Show fit	0.10	ENSDART00000184184 ENSDART00000100288	zgc:112962 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:112962
chr10_-_2788668 Show fit	0.10	ENSDART00000131749 ENSDART00000124356 ENSDART00000085031	ash2l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ash2 (absent, small, or homeotic)-like (Drosophila)
chr4_-_58448785 Show fit	0.09	ENSDART00000172359	si:ch211-212k5.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-212k5.3
chr6_+_42475730 Show fit	0.09	ENSDART00000150226	mst1ra Links NCBI UniProt ZFIN ENSEMBL Google Show fit	macrophage stimulating 1 receptor a
chr12_-_19119176 Show fit	0.08	ENSDART00000149180	aco2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aconitase 2, mitochondrial
chr14_-_30490763 Show fit	0.08	ENSDART00000193166 ENSDART00000183471 ENSDART00000087859	micu3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial calcium uptake family, member 3b
chr6_-_25371196 Show fit	0.08	ENSDART00000187291	PKN2 (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153916
chr17_-_14966384 Show fit	0.08	ENSDART00000105064	txndc16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thioredoxin domain containing 16
chr24_+_80653 Show fit	0.08	ENSDART00000158473 ENSDART00000129135	reck Links NCBI UniProt ZFIN ENSEMBL Google Show fit	reversion-inducing-cysteine-rich protein with kazal motifs
chr6_-_13709591 Show fit	0.08	ENSDART00000151771	chpfb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chondroitin polymerizing factor b
chr7_-_7493758 Show fit	0.07	ENSDART00000036703	pfdn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	prefoldin subunit 2
chr11_+_12719944 Show fit	0.07	ENSDART00000054837 ENSDART00000144954	ap1s2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adaptor-related protein complex 1, sigma 2 subunit
chr20_+_54323218 Show fit	0.07	ENSDART00000191096	CABZ01077555.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr12_+_12789853 Show fit	0.07	ENSDART00000064839	grid1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamate receptor, ionotropic, delta 1b
chr16_-_27676123 Show fit	0.06	ENSDART00000180804	tbrg4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transforming growth factor beta regulator 4
chr25_+_459901 Show fit	0.06	ENSDART00000154895	prtgb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protogenin homolog b (Gallus gallus)
chr25_-_24240797 Show fit	0.05	ENSDART00000132790	spty2d1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SPT2 chromatin protein domain containing 1
chr19_-_3777217 Show fit	0.05	ENSDART00000160510	si:dkey-206d17.15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-206d17.15
chr1_+_52392511 Show fit	0.05	ENSDART00000144025	si:ch211-217k17.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-217k17.8
chr11_+_6115621 Show fit	0.05	ENSDART00000165031 ENSDART00000027666 ENSDART00000161458	nr2f6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear receptor subfamily 2, group F, member 6b
chr20_-_14321359 Show fit	0.04	ENSDART00000145104	dlgap2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	discs, large (Drosophila) homolog-associated protein 2b
chr7_+_41421998 Show fit	0.04	ENSDART00000083967	chpf2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chondroitin polymerizing factor 2
chr16_+_42465518 Show fit	0.04	ENSDART00000058699	si:ch211-215k15.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-215k15.4
chr16_+_4658250 Show fit	0.04	ENSDART00000006212	LIN28A Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-284b18.2
chr13_-_28272299 Show fit	0.04	ENSDART00000006393	tlx1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T cell leukemia homeobox 1
chr16_+_1353894 Show fit	0.04	ENSDART00000148426	celf3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cugbp, Elav-like family member 3b
chr5_-_35137365 Show fit	0.04	ENSDART00000141218	fcho2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FCH domain only 2
chr3_-_10677890 Show fit	0.04	ENSDART00000155382 ENSDART00000171319	si:ch1073-144j5.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-144j5.2
chr18_+_33591704 Show fit	0.04	ENSDART00000185631 ENSDART00000057845	si:dkey-47k20.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-47k20.5
chr8_+_9699111 Show fit	0.03	ENSDART00000111853	gripap1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	GRIP1 associated protein 1
chr5_+_51102010 Show fit	0.03	ENSDART00000110377	zgc:194398 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:194398
chr23_+_3538463 Show fit	0.03	ENSDART00000172758	si:dkey-9l20.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-9l20.3
chr22_-_27709692 Show fit	0.03	ENSDART00000172458	CR547131.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr12_+_40905427 Show fit	0.03	ENSDART00000170526 ENSDART00000185771 ENSDART00000193945	CDH18 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cadherin 18
chr15_+_26940569 Show fit	0.03	ENSDART00000189636 ENSDART00000077172	bcas3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	breast carcinoma amplified sequence 3
chr23_+_12916062 Show fit	0.03	ENSDART00000144268	si:dkey-150i13.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-150i13.2
chr4_+_19700308 Show fit	0.03	ENSDART00000027919	pax4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired box 4
chr4_+_9911534 Show fit	0.03	ENSDART00000109452	sbf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SET binding factor 1
chr1_-_16676177 Show fit	0.03	ENSDART00000159038	frg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FSHD region gene 1
chr8_-_14052349 Show fit	0.02	ENSDART00000135811	atp2b3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase plasma membrane Ca2+ transporting 3a
chr25_-_27842654 Show fit	0.02	ENSDART00000154852 ENSDART00000156906	asb15a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin repeat and SOCS box containing 15a
chr24_+_6353394 Show fit	0.02	ENSDART00000165118	CR352329.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr3_-_62417677 Show fit	0.02	ENSDART00000101888	sstr2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	somatostatin receptor 2b
chr13_+_6295173 Show fit	0.02	ENSDART00000163855	angpt2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	angiopoietin 2a
chr4_-_50926767 Show fit	0.02	ENSDART00000183430	si:ch211-208f21.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-208f21.3
chr1_+_59090583 Show fit	0.02	ENSDART00000150658	mfap4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microfibril associated protein 4
chr15_-_18432673 Show fit	0.02	ENSDART00000146853	ncam1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neural cell adhesion molecule 1b
chr13_+_4671698 Show fit	0.02	ENSDART00000164617 ENSDART00000128494 ENSDART00000165776	pla2g12b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phospholipase A2, group XIIB
chr8_-_3336273 Show fit	0.01	ENSDART00000081160	zgc:173737 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:173737
chr16_-_46567344 Show fit	0.01	ENSDART00000127721	si:dkey-152b24.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-152b24.7
chr6_-_131401 Show fit	0.01	ENSDART00000151251	LRRC8E Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:zfos-323e3.4
chr3_-_1388936 Show fit	0.01	ENSDART00000171278	ddx47 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
chr11_+_25276748 Show fit	0.01	ENSDART00000126211	cyldb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cylindromatosis (turban tumor syndrome), b
chr13_-_301309 Show fit	0.01	ENSDART00000131747	chs1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chitin synthase 1
chr1_+_59090743 Show fit	0.01	ENSDART00000100199	mfap4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microfibril associated protein 4
chr25_-_3217115 Show fit	0.01	ENSDART00000032390	gtf2h1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	general transcription factor IIH, polypeptide 1
chr22_-_775776 Show fit	0.01	ENSDART00000149749	rbbp5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	retinoblastoma binding protein 5
chr3_-_34055745 Show fit	0.00	ENSDART00000151652	ighv2-2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immunoglobulin heavy variable 2-2
chr1_+_59090972 Show fit	0.00	ENSDART00000171497	mfap4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microfibril associated protein 4

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0034723	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.1	0.2	GO:0008611	ether lipid biosynthetic process(GO:0008611) glycerol ether biosynthetic process(GO:0046504) cellular lipid biosynthetic process(GO:0097384) ether biosynthetic process(GO:1901503)
0.1	0.3	GO:0070640	vitamin D3 metabolic process(GO:0070640) cellular response to vitamin D(GO:0071305)
0.1	0.2	GO:0046900	tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0	0.4	GO:0055129	proline biosynthetic process(GO:0006561) L-proline biosynthetic process(GO:0055129)
0.0	0.1	GO:1903573	negative regulation of response to endoplasmic reticulum stress(GO:1903573)
0.0	0.1	GO:1905048	regulation of metallopeptidase activity(GO:1905048)
0.0	0.1	GO:0015074	DNA integration(GO:0015074)
0.0	0.1	GO:0010847	regulation of chromatin assembly(GO:0010847)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:1990909	Wnt signalosome(GO:1990909)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0016774	phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0	0.1	GO:0003994	aconitate hydratase activity(GO:0003994)
0.0	0.1	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238)
0.0	0.2	GO:0008242	omega peptidase activity(GO:0008242)
0.0	0.1	GO:0001042	RNA polymerase I core binding(GO:0001042)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION	Genes involved in Amino acid synthesis and interconversion (transamination)
0.0	0.3	REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE	Genes involved in Cytochrome P450 - arranged by substrate type