PRJNA438478: RNAseq of wild type zebrafish germline

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
lhx6 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000006896	LIM homeobox 6
lhx6 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000112520	LIM homeobox 6

Gene	Promoter	Pearson corr. coef.	P-value	Plot
lhx6	dr11_v1_chr10_+_9372702_9372702	-0.93	3.1e-08	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_-_21362071 Show fit	3.35	ENSDART00000125167	avd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	avidin
chr8_-_23780334 Show fit	3.26	ENSDART00000145179 ENSDART00000145894	zgc:195245 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:195245
chr10_-_21362320 Show fit	3.13	ENSDART00000189789	avd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	avidin
chr10_-_34002185 Show fit	2.47	ENSDART00000046599	zar1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zygote arrest 1-like
chr21_+_25777425 Show fit	2.28	ENSDART00000021620	cldnd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	claudin d
chr11_-_44801968 Show fit	2.25	ENSDART00000161846	map1lc3c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule-associated protein 1 light chain 3 gamma
chr12_-_14143344 Show fit	2.19	ENSDART00000152742	buc2l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bucky ball 2-like
chr12_-_33357655 Show fit	2.14	ENSDART00000066233 ENSDART00000148165	slc16a3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 16 (monocarboxylate transporter), member 3
chr9_-_35633827 Show fit	1.96	ENSDART00000077745	zp2l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 2, like 1
chr2_-_15324837 Show fit	1.91	ENSDART00000015655	tecrl2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	trans-2,3-enoyl-CoA reductase-like 2b
chr23_+_2728095 Show fit	1.74	ENSDART00000066086	zgc:114123 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:114123
chr6_+_28208973 Show fit	1.72	ENSDART00000171216 ENSDART00000171377 ENSDART00000167389 ENSDART00000166988	LSM2 (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-14h10.2
chr19_+_31585917 Show fit	1.68	ENSDART00000132182	gmnn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	geminin, DNA replication inhibitor
chr24_-_9979342 Show fit	1.62	ENSDART00000138576 ENSDART00000191206	zgc:171977 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:171977
chr5_+_37903790 Show fit	1.60	ENSDART00000162470	tmprss4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protease, serine 4b
chr2_+_6253246 Show fit	1.58	ENSDART00000058256 ENSDART00000076700	zp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 3b
chr25_+_5972690 Show fit	1.53	ENSDART00000067517	si:ch211-11i22.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-11i22.4
chr20_-_6532462 Show fit	1.49	ENSDART00000054653	mcm3l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), like
chr15_+_46313082 Show fit	1.38	ENSDART00000153830	si:ch1073-190k2.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch1073-190k2.1
chr20_-_14114078 Show fit	1.37	ENSDART00000168434 ENSDART00000104032	si:ch211-223m11.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-223m11.2
chr20_+_14114258 Show fit	1.35	ENSDART00000044937	kcns3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3b
chr1_-_18811517 Show fit	1.34	ENSDART00000142026	si:dkey-167i21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-167i21.2
chr6_+_21001264 Show fit	1.33	ENSDART00000044519 ENSDART00000151278	cx44.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 44.2
chr12_-_48188928 Show fit	1.30	ENSDART00000184384	pald1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatase domain containing, paladin 1a
chr20_-_23426339 Show fit	1.26	ENSDART00000004625	zar1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zygote arrest 1
chr21_-_32060993 Show fit	1.17	ENSDART00000131651	si:ch211-160j14.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-160j14.2
chr1_-_55248496 Show fit	1.06	ENSDART00000098615	nanos3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nanos homolog 3
chr17_-_40956035 Show fit	1.04	ENSDART00000124715	si:dkey-16j16.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-16j16.4
chr10_-_34916208 Show fit	1.00	ENSDART00000187371	ccna1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin A1
chr13_+_38814521 Show fit	0.96	ENSDART00000110976	col19a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen, type XIX, alpha 1
chr14_+_8940326 Show fit	0.95	ENSDART00000159920	rps6kal Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribosomal protein S6 kinase a, like
chr11_+_37638873 Show fit	0.93	ENSDART00000186384 ENSDART00000184291 ENSDART00000131782 ENSDART00000140502	sh2d5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SH2 domain containing 5
chr14_+_15155684 Show fit	0.92	ENSDART00000167966	zgc:158852 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:158852
chr7_-_59159253 Show fit	0.92	ENSDART00000159285	haus6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HAUS augmin-like complex, subunit 6
chr2_-_26596794 Show fit	0.89	ENSDART00000134685 ENSDART00000056787	zgc:113691 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113691
chr10_+_11261576 Show fit	0.88	ENSDART00000155333	hsdl2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hydroxysteroid dehydrogenase like 2
chr23_-_28120058 Show fit	0.88	ENSDART00000087815	b4galnt1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	beta-1,4-N-acetyl-galactosaminyl transferase 1a
chr17_+_16046314 Show fit	0.88	ENSDART00000154554 ENSDART00000154338 ENSDART00000155336	si:ch73-204p21.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-204p21.2
chr7_+_51795667 Show fit	0.87	ENSDART00000174201 ENSDART00000073839	slc38a7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 38, member 7
chr14_+_34492288 Show fit	0.86	ENSDART00000144301	wnt8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	wingless-type MMTV integration site family, member 8a
chr8_-_25034411 Show fit	0.78	ENSDART00000135973	nfyal Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, alpha, like
chr19_+_10661520 Show fit	0.77	ENSDART00000091813 ENSDART00000165653	ago3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	argonaute RISC catalytic component 3b
chr20_+_29209767 Show fit	0.76	ENSDART00000141252	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr16_+_47207691 Show fit	0.76	ENSDART00000062507	ica1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	islet cell autoantigen 1
chr5_+_25733774 Show fit	0.74	ENSDART00000137088 ENSDART00000098467	abhd17b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	abhydrolase domain containing 17B
chr23_-_10786400 Show fit	0.74	ENSDART00000055038	rybpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RING1 and YY1 binding protein a
chr25_-_6049339 Show fit	0.74	ENSDART00000075184	snx1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 1a
chr10_+_33393829 Show fit	0.73	ENSDART00000163458 ENSDART00000115379	zgc:153345 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153345
chr4_+_4849789 Show fit	0.72	ENSDART00000130818 ENSDART00000127751	ptprz1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein tyrosine phosphatase, receptor-type, Z polypeptide 1b
chr8_-_25033681 Show fit	0.72	ENSDART00000003493	nfyal Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear transcription factor Y, alpha, like
chr6_+_50393047 Show fit	0.72	ENSDART00000055502 ENSDART00000055511	ergic3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ERGIC and golgi 3
chr1_-_513762 Show fit	0.71	ENSDART00000148162 ENSDART00000144606	trmt10c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tRNA methyltransferase 10C, mitochondrial RNase P subunit
chr15_+_28410664 Show fit	0.71	ENSDART00000132028 ENSDART00000057697 ENSDART00000057257	pitpnaa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatidylinositol transfer protein, alpha a
chr20_+_29209926 Show fit	0.70	ENSDART00000152949 ENSDART00000153016	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr9_-_11676491 Show fit	0.70	ENSDART00000022358	zc3h15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger CCCH-type containing 15
chr5_-_19006290 Show fit	0.70	ENSDART00000137022	golga3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	golgin A3
chr7_-_26532089 Show fit	0.69	ENSDART00000121698	senp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SUMO1/sentrin/SMT3 specific peptidase 3b
chr14_+_35428152 Show fit	0.69	ENSDART00000172597	sytl4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin-like 4
chr11_+_18873619 Show fit	0.68	ENSDART00000176141	magi1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 1b
chr1_-_23308225 Show fit	0.67	ENSDART00000137567 ENSDART00000008201	smim14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	small integral membrane protein 14
chr10_-_35257458 Show fit	0.66	ENSDART00000143890 ENSDART00000139107 ENSDART00000082445	prr11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proline rich 11
chr8_-_15129573 Show fit	0.66	ENSDART00000142358	bcar3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BCAR3, NSP family adaptor protein
chr22_-_21897203 Show fit	0.66	ENSDART00000158501 ENSDART00000105566 ENSDART00000136795	gna11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), alpha 11a (Gq class)
chr23_-_33709964 Show fit	0.66	ENSDART00000143333 ENSDART00000130338	pou6f1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	POU class 6 homeobox 1
chr5_+_29851433 Show fit	0.65	ENSDART00000143434	ubash3ba Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin associated and SH3 domain containing Ba
chr13_-_35808904 Show fit	0.64	ENSDART00000171667	map3k4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitogen-activated protein kinase kinase kinase 4
chr15_+_17345609 Show fit	0.62	ENSDART00000111753	vmp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vacuole membrane protein 1
chr9_-_746317 Show fit	0.62	ENSDART00000129632 ENSDART00000130720	usp37 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin specific peptidase 37
chr24_+_29912509 Show fit	0.62	ENSDART00000168422	frrs1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ferric-chelate reductase 1b
chr23_-_36446307 Show fit	0.62	ENSDART00000136623	zgc:174906 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:174906
chr20_+_29209615 Show fit	0.61	ENSDART00000062350	katnbl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	katanin p80 subunit B-like 1
chr5_+_60590796 Show fit	0.61	ENSDART00000159859	tmem132e Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 132E
chr1_+_13930625 Show fit	0.61	ENSDART00000111026	noctb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nocturnin b
chr6_-_12172424 Show fit	0.60	ENSDART00000109344	tanc1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a
chr17_+_37227936 Show fit	0.59	ENSDART00000076009	hadhab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b
chr7_-_49594995 Show fit	0.58	ENSDART00000174161 ENSDART00000109147	brsk2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BR serine/threonine kinase 2b
chr12_-_35393211 Show fit	0.57	ENSDART00000137139	camk2g1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 1
chr1_+_35985813 Show fit	0.56	ENSDART00000179634 ENSDART00000139636 ENSDART00000175902	zgc:152968 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:152968
chr24_+_19415124 Show fit	0.55	ENSDART00000186931	sulf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sulfatase 1
chr15_-_18115540 Show fit	0.54	ENSDART00000131639 ENSDART00000047902	arcn1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	archain 1b
chr12_+_22580579 Show fit	0.53	ENSDART00000171725 ENSDART00000192290	capgb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	capping protein (actin filament), gelsolin-like b
chr8_-_49728590 Show fit	0.52	ENSDART00000135714 ENSDART00000138810 ENSDART00000098319	gkap1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G kinase anchoring protein 1
chr4_-_2637689 Show fit	0.52	ENSDART00000192550 ENSDART00000021953 ENSDART00000150344	cog5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	component of oligomeric golgi complex 5
chr5_-_25733745 Show fit	0.52	ENSDART00000051566	zgc:101016 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:101016
chr13_+_38817871 Show fit	0.52	ENSDART00000187708	col19a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	collagen, type XIX, alpha 1
chr5_+_36768674 Show fit	0.51	ENSDART00000146854	mark4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAP/microtubule affinity-regulating kinase 4a
chr25_-_10791437 Show fit	0.51	ENSDART00000127054	BX572619.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr4_+_2637947 Show fit	0.50	ENSDART00000130623	dus4l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dihydrouridine synthase 4-like (S. cerevisiae)
chr2_+_26237322 Show fit	0.50	ENSDART00000030520	palm1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paralemmin 1b
chr1_-_40102836 Show fit	0.50	ENSDART00000147317	cntf Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ciliary neurotrophic factor
chr1_+_513986 Show fit	0.49	ENSDART00000109083 ENSDART00000081945	txnl4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thioredoxin-like 4B
chr14_-_16082806 Show fit	0.49	ENSDART00000165656	mxd3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAX dimerization protein 3
chr21_-_18275226 Show fit	0.48	ENSDART00000126672 ENSDART00000135239	brd3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bromodomain containing 3a
chr22_-_14247276 Show fit	0.48	ENSDART00000033332	si:ch211-246m6.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-246m6.5
chr23_-_2901167 Show fit	0.47	ENSDART00000165955 ENSDART00000190616	zhx3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc fingers and homeoboxes 3
chr12_-_18577983 Show fit	0.47	ENSDART00000193262	zdhhc4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, DHHC-type containing 4
chr25_+_35891342 Show fit	0.46	ENSDART00000147093	lsm14aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LSM14A mRNA processing body assembly factor a
chr24_-_25004553 Show fit	0.46	ENSDART00000080997 ENSDART00000136860	zdhhc20b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, DHHC-type containing 20b
chr20_-_9436521 Show fit	0.45	ENSDART00000133000	zgc:101840 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:101840
chr21_-_39177564 Show fit	0.45	ENSDART00000065143	unc119b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	unc-119 homolog b (C. elegans)
chr23_-_29394505 Show fit	0.44	ENSDART00000017728	pgd Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphogluconate dehydrogenase
chr3_-_26787430 Show fit	0.43	ENSDART00000087047	rab40c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAB40c, member RAS oncogene family
chr20_-_37813863 Show fit	0.43	ENSDART00000147529	batf3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	basic leucine zipper transcription factor, ATF-like 3
chr17_+_49281597 Show fit	0.42	ENSDART00000155599	zgc:113176 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113176
chr8_-_23776399 Show fit	0.42	ENSDART00000114800	INAVA Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-163l21.4
chr2_+_40294313 Show fit	0.41	ENSDART00000037292	epha4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eph receptor A4b
chr5_-_67241633 Show fit	0.41	ENSDART00000114783	clip1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CAP-GLY domain containing linker protein 1a
chr19_-_12648122 Show fit	0.40	ENSDART00000151184	fam210aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 210, member Aa
chr16_-_41714988 Show fit	0.40	ENSDART00000138798	cep85 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 85
chr15_-_9272328 Show fit	0.40	ENSDART00000172114	calm2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calmodulin 2a (phosphorylase kinase, delta)
chr9_+_18829360 Show fit	0.39	ENSDART00000006514	gtf2f2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	general transcription factor IIF, polypeptide 2b
chr15_+_21262917 Show fit	0.39	ENSDART00000101000	gkup Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glucuronokinase with putative uridyl pyrophosphorylase
chr4_-_77557279 Show fit	0.39	ENSDART00000180113	AL935186.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr23_+_27782071 Show fit	0.38	ENSDART00000131379	kmt2d Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lysine (K)-specific methyltransferase 2D
chr6_-_55585423 Show fit	0.38	ENSDART00000157129	slc12a5a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 12 (potassium/chloride transporter), member 5a
chr17_+_8799661 Show fit	0.38	ENSDART00000105326	tonsl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tonsoku-like, DNA repair protein
chr4_+_25917915 Show fit	0.37	ENSDART00000138603	vezt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	vezatin, adherens junctions transmembrane protein
chr8_-_21142550 Show fit	0.37	ENSDART00000143192 ENSDART00000186820 ENSDART00000135938	cpt2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	carnitine palmitoyltransferase 2
chr10_-_32494499 Show fit	0.35	ENSDART00000129395	uvrag Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UV radiation resistance associated gene
chr4_-_73756673 Show fit	0.35	ENSDART00000174274 ENSDART00000192913 ENSDART00000113546	BX855614.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit si:dkey-262g12.14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit zgc:171551 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-262g12.14 zgc:171551
chr9_-_50001606 Show fit	0.35	ENSDART00000161648 ENSDART00000168514	scn1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sodium channel, voltage-gated, type I, alpha
chr2_-_38363017 Show fit	0.34	ENSDART00000088026	prmt5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein arginine methyltransferase 5
chr17_-_43594864 Show fit	0.34	ENSDART00000139980	zfyve28 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, FYVE domain containing 28
chr20_-_48604199 Show fit	0.34	ENSDART00000161762 ENSDART00000170894	mgst3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microsomal glutathione S-transferase 3a
chr25_-_29087925 Show fit	0.34	ENSDART00000171758	rpp25a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonuclease P and MRP subunit p25, a
chr9_-_3934963 Show fit	0.33	ENSDART00000062336	ubr3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin protein ligase E3 component n-recognin 3
chr20_+_28803977 Show fit	0.33	ENSDART00000153351 ENSDART00000038149	fntb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	farnesyltransferase, CAAX box, beta
chr3_+_27798094 Show fit	0.32	ENSDART00000075100 ENSDART00000151437	carhsp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium regulated heat stable protein 1
chr6_-_40922971 Show fit	0.32	ENSDART00000155363	sfi1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SFI1 centrin binding protein
chr3_+_53116172 Show fit	0.32	ENSDART00000115117	brd4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bromodomain containing 4
chr6_-_3982783 Show fit	0.32	ENSDART00000171944	slc25a12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 25 (aspartate/glutamate carrier), member 12
chr13_-_31017960 Show fit	0.31	ENSDART00000145287	wdfy4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WDFY family member 4
chr17_+_8799451 Show fit	0.31	ENSDART00000189814 ENSDART00000191577	tonsl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tonsoku-like, DNA repair protein
chr21_+_20386865 Show fit	0.31	ENSDART00000144366	si:dkey-30k6.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-30k6.5
chr6_-_40713183 Show fit	0.31	ENSDART00000157113 ENSDART00000154810 ENSDART00000153702	si:ch211-157b11.12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-157b11.12
chr10_-_42519773 Show fit	0.31	ENSDART00000039187	march5l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	membrane-associated ring finger (C3HC4) 5, like
chr7_+_36898850 Show fit	0.31	ENSDART00000113342	tox3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	TOX high mobility group box family member 3
chr7_+_17908235 Show fit	0.31	ENSDART00000077113	mta2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	metastasis associated 1 family, member 2
chr13_+_2442841 Show fit	0.30	ENSDART00000114456 ENSDART00000137124 ENSDART00000193737 ENSDART00000189722 ENSDART00000187485	arfgef3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ARFGEF family member 3
chr13_+_40501455 Show fit	0.30	ENSDART00000114985	hpse2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	heparanase 2
chr4_-_4834617 Show fit	0.30	ENSDART00000141539	coa6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome c oxidase assembly factor 6
chr24_+_16547035 Show fit	0.30	ENSDART00000164319	sema5a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
chr19_-_12648408 Show fit	0.30	ENSDART00000103692	fam210aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 210, member Aa
chr9_-_28274932 Show fit	0.29	ENSDART00000137582 ENSDART00000146932	creb1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cAMP responsive element binding protein 1b
chr5_+_19933356 Show fit	0.29	ENSDART00000088819	ankrd13a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin repeat domain 13A
chr18_-_15551360 Show fit	0.29	ENSDART00000159915 ENSDART00000172690	ppfibp1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PTPRF interacting protein, binding protein 1b (liprin beta 1)
chr14_+_29941445 Show fit	0.29	ENSDART00000181761	fam149a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 149 member A
chr3_+_45364849 Show fit	0.29	ENSDART00000153974	ube2ia Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin-conjugating enzyme E2Ia
chr10_-_32494304 Show fit	0.29	ENSDART00000028161	uvrag Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UV radiation resistance associated gene
chr5_-_68093169 Show fit	0.27	ENSDART00000051849	slc25a11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11
chr3_-_43356082 Show fit	0.27	ENSDART00000171213	uncx Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UNC homeobox
chr21_+_18274825 Show fit	0.27	ENSDART00000144322 ENSDART00000147768	wdr5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat domain 5
chr18_+_17725410 Show fit	0.26	ENSDART00000090608	rspry1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger and SPRY domain containing 1
chr20_-_34750363 Show fit	0.26	ENSDART00000152845	znf395b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 395b
chr6_-_48418021 Show fit	0.26	ENSDART00000090528	rhoca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ras homolog family member Ca
chr1_-_21563040 Show fit	0.25	ENSDART00000049572	ncapd3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	non-SMC condensin II complex, subunit D3
chr13_+_15838151 Show fit	0.25	ENSDART00000008987	klc1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin light chain 1a
chr24_+_39518774 Show fit	0.25	ENSDART00000132939	dcun1d3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	defective in cullin neddylation 1 domain containing 3
chr3_-_61162750 Show fit	0.25	ENSDART00000055064	pvalb8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	parvalbumin 8
chr9_+_50001746 Show fit	0.25	ENSDART00000058892	slc38a11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 38, member 11
chr7_-_30174882 Show fit	0.24	ENSDART00000110409	frmd5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FERM domain containing 5
chr19_+_47502581 Show fit	0.24	ENSDART00000171526	CU695215.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr8_+_25034544 Show fit	0.24	ENSDART00000123300	ngrn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neugrin, neurite outgrowth associated
chr1_-_15797663 Show fit	0.24	ENSDART00000177122	SGCZ Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sarcoglycan zeta
chr12_+_48803098 Show fit	0.23	ENSDART00000074768	ppifb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	peptidylprolyl isomerase Fb
chr4_-_4834347 Show fit	0.23	ENSDART00000141803	coa6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome c oxidase assembly factor 6
chr21_+_42226113 Show fit	0.23	ENSDART00000170362	GABRB2 (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	gamma-aminobutyric acid type A receptor beta2 subunit
chr11_+_31864921 Show fit	0.22	ENSDART00000180252	diaph3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	diaphanous-related formin 3
chr16_+_33144306 Show fit	0.22	ENSDART00000101953	rhbdl2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	rhomboid, veinlet-like 2 (Drosophila)
chr21_+_34814444 Show fit	0.22	ENSDART00000161816	wdr55 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat domain 55
chr9_-_43538328 Show fit	0.22	ENSDART00000140526	znf385b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 385B
chr9_+_17983463 Show fit	0.22	ENSDART00000182150	akap11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	A kinase (PRKA) anchor protein 11
chr2_+_37140448 Show fit	0.22	ENSDART00000045016 ENSDART00000142940	pex19 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	peroxisomal biogenesis factor 19
chr5_+_61301525 Show fit	0.21	ENSDART00000128773	doc2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	double C2-like domains, beta
chr23_-_46020226 Show fit	0.21	ENSDART00000160010	SYDE2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synapse defective Rho GTPase homolog 2
chr11_+_5588122 Show fit	0.21	ENSDART00000113281	zgc:172302 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:172302
chr17_-_22552678 Show fit	0.20	ENSDART00000079401	si:ch211-125o16.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-125o16.4
chr4_+_3980247 Show fit	0.20	ENSDART00000049194	gpr37b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G protein-coupled receptor 37b
chr5_-_69004007 Show fit	0.20	ENSDART00000137443	ank1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin 1, erythrocytic a
chr10_+_13000669 Show fit	0.20	ENSDART00000158919 ENSDART00000172625	lpar1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lysophosphatidic acid receptor 1
chr24_-_39518599 Show fit	0.19	ENSDART00000145606 ENSDART00000031486	lyrm1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LYR motif containing 1
chr5_-_15851953 Show fit	0.19	ENSDART00000173101	si:dkey-1k23.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-1k23.3
chr21_+_26748141 Show fit	0.19	ENSDART00000169025	pcxa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pyruvate carboxylase a
chr20_+_41021054 Show fit	0.18	ENSDART00000146052	man1a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mannosidase, alpha, class 1A, member 1
chr20_-_34750045 Show fit	0.18	ENSDART00000186130	znf395b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 395b
chr16_-_26855936 Show fit	0.18	ENSDART00000167320 ENSDART00000078119	ino80c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	INO80 complex subunit C
chr7_-_12464412 Show fit	0.18	ENSDART00000178723	adamtsl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADAMTS-like 3
chr10_-_11385155 Show fit	0.18	ENSDART00000064214	plac8.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	placenta-specific 8, tandem duplicate 1
chr8_-_49766205 Show fit	0.17	ENSDART00000137941 ENSDART00000097919 ENSDART00000147309	hnrnpk Links NCBI UniProt ZFIN ENSEMBL Google Show fit	heterogeneous nuclear ribonucleoprotein K
chr18_+_2554666 Show fit	0.17	ENSDART00000167218	p2ry2.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	purinergic receptor P2Y2, tandem duplicate 1
chr13_+_38521152 Show fit	0.17	ENSDART00000145292	adgrb3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	adhesion G protein-coupled receptor B3
chr22_-_20166660 Show fit	0.17	ENSDART00000085913 ENSDART00000188241	btbd2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BTB (POZ) domain containing 2a
chr7_-_7692723 Show fit	0.17	ENSDART00000183352	aadat Links NCBI UniProt ZFIN ENSEMBL Google Show fit	aminoadipate aminotransferase
chr17_-_37395460 Show fit	0.17	ENSDART00000148160 ENSDART00000075975	crip1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cysteine-rich protein 1
chr23_-_18130264 Show fit	0.16	ENSDART00000016976	nucks1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear casein kinase and cyclin-dependent kinase substrate 1b
chr19_-_42588510 Show fit	0.16	ENSDART00000102583	sytl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin-like 1
chr9_-_51436377 Show fit	0.16	ENSDART00000006612	tbr1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T-box, brain, 1b
chr9_+_19529951 Show fit	0.16	ENSDART00000125416	pknox1.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pbx/knotted 1 homeobox 1.1
chr17_+_20589553 Show fit	0.15	ENSDART00000154447	si:ch73-288o11.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-288o11.4
chr13_-_38088627 Show fit	0.15	ENSDART00000175268	CT027676.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	2.3	GO:0016338	calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)
0.3	0.9	GO:0072111	spinal cord anterior/posterior patterning(GO:0021512) cell proliferation involved in pronephros development(GO:0039015) cell proliferation involved in kidney development(GO:0072111)
0.3	1.1	GO:0030718	germ-line stem cell population maintenance(GO:0030718)
0.2	1.7	GO:0033206	meiotic cytokinesis(GO:0033206) polar body extrusion after meiotic divisions(GO:0040038)
0.2	1.5	GO:1902315	cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.2	0.9	GO:0006978	DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:0006978) DNA damage response, signal transduction resulting in transcription(GO:0042772)
0.1	0.7	GO:0090646	mitochondrial tRNA processing(GO:0090646)
0.1	0.5	GO:0051645	Golgi localization(GO:0051645)
0.1	0.7	GO:0034498	early endosome to Golgi transport(GO:0034498)
0.1	2.2	GO:0006995	cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.1	0.3	GO:1901407	regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901407)
0.1	0.4	GO:0036306	embryonic heart tube elongation(GO:0036306)
0.1	1.6	GO:0007339	binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.1	0.3	GO:0034969	histone arginine methylation(GO:0034969)
0.1	0.3	GO:0018343	protein farnesylation(GO:0018343)
0.1	0.8	GO:0072091	regulation of stem cell proliferation(GO:0072091)
0.1	0.3	GO:0090140	regulation of mitochondrial fission(GO:0090140)
0.1	1.7	GO:0008156	negative regulation of DNA replication(GO:0008156)
0.1	0.6	GO:0035871	protein K11-linked deubiquitination(GO:0035871)
0.1	0.6	GO:2000290	smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021910) regulation of myotome development(GO:2000290)
0.1	0.4	GO:0031116	positive regulation of microtubule polymerization(GO:0031116)
0.1	0.3	GO:0071596	ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.1	0.3	GO:0010032	meiotic chromosome condensation(GO:0010032)
0.1	0.8	GO:0001574	ganglioside biosynthetic process(GO:0001574)
0.1	1.9	GO:0042761	very long-chain fatty acid biosynthetic process(GO:0042761)
0.1	0.2	GO:0070257	regulation of mucus secretion(GO:0070255) positive regulation of mucus secretion(GO:0070257)
0.1	0.7	GO:0002084	protein depalmitoylation(GO:0002084) macromolecule depalmitoylation(GO:0098734)
0.1	1.1	GO:0042953	lipoprotein transport(GO:0042953) lipoprotein localization(GO:0044872)
0.1	0.3	GO:0007175	negative regulation of epidermal growth factor-activated receptor activity(GO:0007175)
0.1	0.2	GO:0097237	cellular response to antibiotic(GO:0071236) cellular response to toxic substance(GO:0097237)
0.1	0.3	GO:0015709	thiosulfate transport(GO:0015709) oxaloacetate transport(GO:0015729) malate transport(GO:0015743) succinate transport(GO:0015744) succinate transmembrane transport(GO:0071422) malate transmembrane transport(GO:0071423)
0.1	0.2	GO:0045046	peroxisomal membrane transport(GO:0015919) protein import into peroxisome membrane(GO:0045046)
0.1	0.4	GO:0070571	negative regulation of axon regeneration(GO:0048681) negative regulation of neuron projection regeneration(GO:0070571)
0.0	0.2	GO:0070301	cellular response to hydrogen peroxide(GO:0070301)
0.0	0.1	GO:1904869	positive regulation of protein localization to nucleus(GO:1900182) regulation of protein localization to Cajal body(GO:1904869) positive regulation of protein localization to Cajal body(GO:1904871)
0.0	0.7	GO:0016926	protein desumoylation(GO:0016926)
0.0	0.6	GO:0035493	SNARE complex assembly(GO:0035493)
0.0	0.4	GO:0035677	posterior lateral line neuromast hair cell development(GO:0035677)
0.0	0.4	GO:0003428	growth plate cartilage morphogenesis(GO:0003422) chondrocyte intercalation involved in growth plate cartilage morphogenesis(GO:0003428)
0.0	1.0	GO:0050796	regulation of insulin secretion(GO:0050796)
0.0	0.3	GO:0001682	tRNA 5'-leader removal(GO:0001682)
0.0	0.1	GO:2000434	regulation of protein neddylation(GO:2000434)
0.0	0.2	GO:0016322	neuron remodeling(GO:0016322)
0.0	0.6	GO:0002574	thrombocyte differentiation(GO:0002574)
0.0	0.2	GO:0060465	pharynx development(GO:0060465)
0.0	0.3	GO:0043490	acidic amino acid transport(GO:0015800) aspartate transport(GO:0015810) L-glutamate transport(GO:0015813) malate-aspartate shuttle(GO:0043490)
0.0	0.7	GO:0033138	positive regulation of peptidyl-serine phosphorylation(GO:0033138)
0.0	0.2	GO:0021877	forebrain neuron fate commitment(GO:0021877)
0.0	0.5	GO:0008535	respiratory chain complex IV assembly(GO:0008535)
0.0	0.2	GO:0031061	negative regulation of histone methylation(GO:0031061)
0.0	0.9	GO:0018230	peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0	0.1	GO:0019532	oxalate transport(GO:0019532)
0.0	2.0	GO:0015718	monocarboxylic acid transport(GO:0015718)
0.0	0.4	GO:0031297	replication fork processing(GO:0031297)
0.0	1.0	GO:0006635	fatty acid beta-oxidation(GO:0006635)
0.0	0.2	GO:0046958	nonassociative learning(GO:0046958) habituation(GO:0046959)
0.0	0.7	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0	0.2	GO:0033700	phospholipid efflux(GO:0033700)
0.0	0.2	GO:0045116	protein neddylation(GO:0045116)
0.0	1.1	GO:0003333	amino acid transmembrane transport(GO:0003333)
0.0	0.5	GO:0043524	negative regulation of neuron apoptotic process(GO:0043524)
0.0	1.0	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029)
0.0	0.5	GO:0006891	intra-Golgi vesicle-mediated transport(GO:0006891)
0.0	0.2	GO:0060217	hemangioblast cell differentiation(GO:0060217)
0.0	1.5	GO:0048846	axon extension involved in axon guidance(GO:0048846) neuron projection extension involved in neuron projection guidance(GO:1902284)
0.0	0.5	GO:0051014	actin filament severing(GO:0051014)
0.0	0.6	GO:0042149	cellular response to glucose starvation(GO:0042149)
0.0	0.7	GO:0007050	cell cycle arrest(GO:0007050)
0.0	0.7	GO:0035335	peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0	0.3	GO:0060158	phospholipase C-activating dopamine receptor signaling pathway(GO:0060158)
0.0	0.1	GO:0006121	mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.0	0.7	GO:0015914	phospholipid transport(GO:0015914)
0.0	0.6	GO:0072114	pronephros morphogenesis(GO:0072114)
0.0	0.4	GO:0006884	cell volume homeostasis(GO:0006884)
0.0	0.0	GO:0038158	granulocyte colony-stimulating factor signaling pathway(GO:0038158)
0.0	1.3	GO:0017148	negative regulation of translation(GO:0017148)
0.0	0.1	GO:0006098	pentose-phosphate shunt(GO:0006098)
0.0	0.3	GO:0051568	histone H3-K4 methylation(GO:0051568)
0.0	0.0	GO:0097067	cellular response to thyroid hormone stimulus(GO:0097067)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.0	GO:0097124	cyclin A2-CDK2 complex(GO:0097124)
0.3	0.9	GO:0097189	apoptotic body(GO:0097189)
0.2	0.9	GO:1990498	mitotic spindle microtubule(GO:1990498)
0.1	1.5	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.1	2.2	GO:0042555	MCM complex(GO:0042555)
0.1	0.8	GO:0031332	RISC complex(GO:0016442) RNAi effector complex(GO:0031332)
0.1	0.7	GO:0042645	nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.1	0.3	GO:0005965	protein farnesyltransferase complex(GO:0005965)
0.1	0.7	GO:0030904	retromer complex(GO:0030904)
0.1	2.2	GO:0000421	autophagosome membrane(GO:0000421)
0.1	0.4	GO:0005674	transcription factor TFIIF complex(GO:0005674)
0.1	1.3	GO:0033116	endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116)
0.0	0.5	GO:0030126	COPI vesicle coat(GO:0030126)
0.0	0.3	GO:0000172	ribonuclease MRP complex(GO:0000172)
0.0	0.5	GO:0045171	intercellular bridge(GO:0045171)
0.0	0.2	GO:0043034	costamere(GO:0043034)
0.0	0.5	GO:0017119	Golgi transport complex(GO:0017119)
0.0	0.7	GO:0031312	extrinsic component of organelle membrane(GO:0031312)
0.0	0.8	GO:0030667	secretory granule membrane(GO:0030667)
0.0	0.5	GO:1990124	messenger ribonucleoprotein complex(GO:1990124)
0.0	0.7	GO:0071339	MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.0	0.5	GO:0005682	U5 snRNP(GO:0005682)
0.0	0.2	GO:0043083	synaptic cleft(GO:0043083)
0.0	0.3	GO:1990589	ATF4-CREB1 transcription factor complex(GO:1990589)
0.0	2.7	GO:0070160	bicellular tight junction(GO:0005923) occluding junction(GO:0070160)
0.0	0.4	GO:0044666	MLL3/4 complex(GO:0044666)
0.0	0.3	GO:0048188	Set1C/COMPASS complex(GO:0048188)
0.0	0.3	GO:0016581	NuRD complex(GO:0016581) CHD-type complex(GO:0090545)
0.0	0.2	GO:0031011	Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0	0.1	GO:1990513	CLOCK-BMAL transcription complex(GO:1990513)
0.0	0.4	GO:0043186	P granule(GO:0043186)
0.0	0.1	GO:0035517	PR-DUB complex(GO:0035517)
0.0	0.7	GO:0005834	heterotrimeric G-protein complex(GO:0005834)
0.0	0.8	GO:0030173	integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.3	6.7	GO:0009374	biotin binding(GO:0009374)
0.3	0.9	GO:0000099	sulfur amino acid transmembrane transporter activity(GO:0000099)
0.2	0.6	GO:0016509	long-chain-3-hydroxyacyl-CoA dehydrogenase activity(GO:0016509)
0.2	2.1	GO:0015129	lactate transmembrane transporter activity(GO:0015129)
0.2	0.7	GO:0052905	tRNA (guanine(9)-N(1))-methyltransferase activity(GO:0052905)
0.1	1.6	GO:0035804	structural constituent of egg coat(GO:0035804)
0.1	0.3	GO:0035243	protein-arginine omega-N symmetric methyltransferase activity(GO:0035243)
0.1	0.7	GO:0008526	phosphatidylinositol transporter activity(GO:0008526)
0.1	0.4	GO:0061656	SUMO conjugating enzyme activity(GO:0061656)
0.1	0.5	GO:0017150	tRNA dihydrouridine synthase activity(GO:0017150)
0.1	0.3	GO:0004660	protein farnesyltransferase activity(GO:0004660)
0.1	0.9	GO:0004711	ribosomal protein S6 kinase activity(GO:0004711)
0.1	0.8	GO:0035198	miRNA binding(GO:0035198)
0.1	0.7	GO:0031826	type 2A serotonin receptor binding(GO:0031826)
0.1	1.5	GO:0003688	DNA replication origin binding(GO:0003688)
0.1	0.3	GO:0015131	thiosulfate transmembrane transporter activity(GO:0015117) oxaloacetate transmembrane transporter activity(GO:0015131) malate transmembrane transporter activity(GO:0015140)
0.1	0.4	GO:0004095	carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416)
0.0	1.1	GO:0050321	tau-protein kinase activity(GO:0050321)
0.0	0.7	GO:0016929	SUMO-specific protease activity(GO:0016929)
0.0	0.2	GO:0090556	phospholipid-translocating ATPase activity(GO:0004012) phosphatidylcholine-translocating ATPase activity(GO:0090554) phosphatidylserine-translocating ATPase activity(GO:0090556)
0.0	0.3	GO:0036137	kynurenine-oxoglutarate transaminase activity(GO:0016212) kynurenine aminotransferase activity(GO:0036137)
0.0	0.6	GO:0004535	poly(A)-specific ribonuclease activity(GO:0004535)
0.0	0.7	GO:0008474	palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)
0.0	0.9	GO:0042043	neurexin family protein binding(GO:0042043)
0.0	0.6	GO:0008449	N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.0	0.3	GO:0015183	L-aspartate transmembrane transporter activity(GO:0015183)
0.0	2.0	GO:0031625	ubiquitin protein ligase binding(GO:0031625)
0.0	0.1	GO:0042609	CD4 receptor binding(GO:0042609)
0.0	0.4	GO:0005005	transmembrane-ephrin receptor activity(GO:0005005)
0.0	0.3	GO:0070577	lysine-acetylated histone binding(GO:0070577)
0.0	1.6	GO:0005044	scavenger receptor activity(GO:0005044)
0.0	0.9	GO:0019707	protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0	1.3	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627)
0.0	0.2	GO:0000268	peroxisome targeting sequence binding(GO:0000268)
0.0	0.2	GO:0015924	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571) mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.0	0.4	GO:0097602	cullin family protein binding(GO:0097602)
0.0	0.7	GO:0005109	frizzled binding(GO:0005109)
0.0	0.8	GO:0008376	acetylgalactosaminyltransferase activity(GO:0008376)
0.0	0.1	GO:0042975	peroxisome proliferator activated receptor binding(GO:0042975)
0.0	0.3	GO:0004602	glutathione peroxidase activity(GO:0004602)
0.0	0.4	GO:0042800	histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0	0.3	GO:0035497	cAMP response element binding(GO:0035497)
0.0	1.0	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0	0.4	GO:0015377	cation:chloride symporter activity(GO:0015377) potassium:chloride symporter activity(GO:0015379)
0.0	1.1	GO:0003727	single-stranded RNA binding(GO:0003727)
0.0	0.2	GO:0016018	cyclosporin A binding(GO:0016018)
0.0	0.2	GO:0070915	lysophosphatidic acid receptor activity(GO:0070915)
0.0	1.5	GO:0005201	extracellular matrix structural constituent(GO:0005201)
0.0	0.3	GO:0001103	RNA polymerase II repressing transcription factor binding(GO:0001103)
0.0	0.0	GO:0031530	gonadotropin hormone-releasing hormone activity(GO:0005183) gonadotropin-releasing hormone receptor binding(GO:0031530)
0.0	0.2	GO:0001608	G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028)
0.0	0.3	GO:0032266	phosphatidylinositol-3-phosphate binding(GO:0032266)
0.0	0.5	GO:0004683	calmodulin-dependent protein kinase activity(GO:0004683)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.0	SA REG CASCADE OF CYCLIN EXPR	Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0	1.5	NABA COLLAGENS	Genes encoding collagen proteins
0.0	0.5	PID TCR CALCIUM PATHWAY	Calcium signaling in the CD4+ TCR pathway
0.0	0.7	ST TUMOR NECROSIS FACTOR PATHWAY	Tumor Necrosis Factor Pathway.
0.0	0.6	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.0	0.7	PID CDC42 REG PATHWAY	Regulation of CDC42 activity
0.0	0.3	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.0	0.9	WNT SIGNALING	Genes related to Wnt-mediated signal transduction
0.0	0.3	PID ERBB1 INTERNALIZATION PATHWAY	Internalization of ErbB1

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	2.1	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
0.1	1.7	REACTOME ASSOCIATION OF LICENSING FACTORS WITH THE PRE REPLICATIVE COMPLEX	Genes involved in Association of licensing factors with the pre-replicative complex
0.1	1.0	REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION	Genes involved in Cyclin A/B1 associated events during G2/M transition
0.0	1.5	REACTOME COLLAGEN FORMATION	Genes involved in Collagen formation
0.0	0.6	REACTOME GLUCONEOGENESIS	Genes involved in Gluconeogenesis
0.0	0.4	REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE	Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle
0.0	0.3	REACTOME TRYPTOPHAN CATABOLISM	Genes involved in Tryptophan catabolism
0.0	0.2	REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS	Genes involved in ABCA transporters in lipid homeostasis
0.0	0.3	REACTOME OTHER SEMAPHORIN INTERACTIONS	Genes involved in Other semaphorin interactions
0.0	0.3	REACTOME HS GAG DEGRADATION	Genes involved in HS-GAG degradation