PRJNA438478: RNAseq of wild type zebrafish germline

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
klf7b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000043821	Kruppel-like factor 7b
klf7a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000073857	Kruppel-like factor 7a

Gene	Promoter	Pearson corr. coef.	P-value	Plot
klf7b	dr11_v1_chr9_-_28399071_28399071	0.77	1.9e-04	Click!
klf7a	dr11_v1_chr1_-_6494384_6494384	0.72	6.8e-04	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_+_43669122 Show fit	0.15	ENSDART00000139151	si:ch211-193k19.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-193k19.1
chr2_+_54844755 Show fit	0.14	ENSDART00000170428	rnf126 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 126
chr5_-_35252761 Show fit	0.10	ENSDART00000051278	tnpo1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transportin 1
chr11_-_16115804 Show fit	0.10	ENSDART00000143436 ENSDART00000157928	rpf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribosome production factor 1 homolog
chr16_-_29557338 Show fit	0.09	ENSDART00000058888	hormad1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HORMA domain containing 1
chr19_+_23982466 Show fit	0.09	ENSDART00000080673	syt11a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptotagmin XIa
chr19_+_31404686 Show fit	0.07	ENSDART00000078459	pip4p2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2
chr25_-_19585010 Show fit	0.07	ENSDART00000021340	sycp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptonemal complex protein 3
chr18_+_3243292 Show fit	0.06	ENSDART00000166580	pak1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	p21 protein (Cdc42/Rac)-activated kinase 1
chr1_+_16574312 Show fit	0.06	ENSDART00000187067	mtus1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule associated tumor suppressor 1b
chr25_+_21098990 Show fit	0.06	ENSDART00000017488	rad52 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAD52 homolog, DNA repair protein
chr24_+_22021675 Show fit	0.05	ENSDART00000081234	ropn1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	rhophilin associated tail protein 1-like
chr6_-_10034145 Show fit	0.05	ENSDART00000185999	nudt15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nudix (nucleoside diphosphate linked moiety X)-type motif 15
chr25_+_21098675 Show fit	0.05	ENSDART00000079012	rad52 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAD52 homolog, DNA repair protein
chr21_+_8427059 Show fit	0.05	ENSDART00000143151	dennd1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DENN/MADD domain containing 1A
chr15_+_17441734 Show fit	0.04	ENSDART00000153729	snx19b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 19b
chr2_-_14390627 Show fit	0.04	ENSDART00000172367	sgip1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SH3-domain GRB2-like (endophilin) interacting protein 1b
chr25_-_19584735 Show fit	0.04	ENSDART00000137930	sycp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	synaptonemal complex protein 3
chr8_+_53423408 Show fit	0.04	ENSDART00000164792	cacna1db Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium channel, voltage-dependent, L type, alpha 1D subunit, b
chr19_-_30422239 Show fit	0.03	ENSDART00000043554	ppp1r10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 10
chr2_-_23172708 Show fit	0.03	ENSDART00000041365	prrx1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paired related homeobox 1a
chr19_-_30422035 Show fit	0.03	ENSDART00000144265	ppp1r10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 10
chr13_-_17464362 Show fit	0.03	ENSDART00000145499	lrmda Links NCBI UniProt ZFIN ENSEMBL Google Show fit	leucine rich melanocyte differentiation associated
chr20_+_20731633 Show fit	0.03	ENSDART00000191952 ENSDART00000165224	ppp1r13bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 13Bb
chr15_+_5132439 Show fit	0.03	ENSDART00000010350	pgm2l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphoglucomutase 2-like 1
chr20_+_20731052 Show fit	0.03	ENSDART00000047662	ppp1r13bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 13Bb
chr2_-_42035250 Show fit	0.03	ENSDART00000056460 ENSDART00000140788	gbp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanylate binding protein 1
chr16_+_33163858 Show fit	0.03	ENSDART00000101943	rragca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ras-related GTP binding Ca
chr24_-_21952164 Show fit	0.03	ENSDART00000058948	acot9.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acyl-CoA thioesterase 9, tandem duplicate 2
chr7_-_31759394 Show fit	0.02	ENSDART00000193040	igdcc4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immunoglobulin superfamily, DCC subclass, member 4
chr20_+_25879826 Show fit	0.02	ENSDART00000018519	zgc:153896 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153896
chr5_+_26795465 Show fit	0.02	ENSDART00000053001	tcn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transcobalamin II
chr17_-_49339677 Show fit	0.02	ENSDART00000047857	orc3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	origin recognition complex, subunit 3
chr20_+_18741089 Show fit	0.02	ENSDART00000183218	fam167ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 167, member Ab
chr8_-_22288258 Show fit	0.02	ENSDART00000140978 ENSDART00000100046	si:ch211-147a11.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-147a11.3
chr5_-_26795438 Show fit	0.02	ENSDART00000146124	si:ch211-102c2.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-102c2.7
chr1_+_14073891 Show fit	0.01	ENSDART00000021693	ank2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ankyrin 2a, neuronal
chr17_+_43843536 Show fit	0.01	ENSDART00000164097	FO704777.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr25_+_35683956 Show fit	0.01	ENSDART00000149768	kif21a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 21A
chr15_-_36369743 Show fit	0.01	ENSDART00000155942	si:dkey-23k10.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-23k10.3
chr25_-_16056292 Show fit	0.01	ENSDART00000186071	cyb5r2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome b5 reductase 2
chr17_+_12138715 Show fit	0.01	ENSDART00000112888	SCCPDH (1 of many) Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:174379
chr7_-_37563883 Show fit	0.01	ENSDART00000148805	nod2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nucleotide-binding oligomerization domain containing 2
chr1_+_39990547 Show fit	0.01	ENSDART00000112150	sod3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	superoxide dismutase 3, extracellular b
chr10_-_22970723 Show fit	0.01	ENSDART00000182145 ENSDART00000100802	FP102052.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr12_-_20350629 Show fit	0.01	ENSDART00000066384	hbbe2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hemoglobin beta embryonic-2
chr5_+_15202495 Show fit	0.01	ENSDART00000144915	tbx1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T-box 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0045002	double-strand break repair via single-strand annealing(GO:0045002)
0.0	0.1	GO:0060631	regulation of meiosis I(GO:0060631)
0.0	0.1	GO:0003232	bulbus arteriosus development(GO:0003232)