Project
PRJNA438478: RNAseq of wild type zebrafish germline
Navigation
Downloads
Results for irf6
Z-value: 0.36
Motif logo
Transcription factors associated with irf6
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
irf6
|
ENSDARG00000101986 | interferon regulatory factor 6 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| irf6 | dr11_v1_chr22_+_1170294_1170295 | 0.74 | 4.0e-04 | Click! |
Activity profile of irf6 motif
Sorted Z-values of irf6 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr11_-_30508843 | 0.38 |
ENSDART00000101667
ENSDART00000179930 |
map4k3a
|
mitogen-activated protein kinase kinase kinase kinase 3a |
| chr3_-_4501026 | 0.35 |
ENSDART00000163052
|
zgc:162198
|
zgc:162198 |
| chr18_+_17624295 | 0.30 |
ENSDART00000151865
ENSDART00000190408 ENSDART00000189204 ENSDART00000188894 ENSDART00000033762 ENSDART00000193471 |
nlrc5
|
NLR family, CARD domain containing 5 |
| chr20_-_3911546 | 0.27 |
ENSDART00000169787
|
cnksr3
|
cnksr family member 3 |
| chr18_+_44532199 | 0.26 |
ENSDART00000135386
|
st14a
|
suppression of tumorigenicity 14 (colon carcinoma) a |
| chr4_-_17669881 | 0.25 |
ENSDART00000066997
|
dram1
|
DNA-damage regulated autophagy modulator 1 |
| chr7_+_69187585 | 0.24 |
ENSDART00000160499
ENSDART00000166258 |
marveld3
|
MARVEL domain containing 3 |
| chr18_+_44532370 | 0.24 |
ENSDART00000086952
|
st14a
|
suppression of tumorigenicity 14 (colon carcinoma) a |
| chr18_+_44532883 | 0.23 |
ENSDART00000121994
|
st14a
|
suppression of tumorigenicity 14 (colon carcinoma) a |
| chr19_-_15420678 | 0.23 |
ENSDART00000151454
ENSDART00000027697 |
serinc2
|
serine incorporator 2 |
| chr8_+_47897734 | 0.23 |
ENSDART00000140266
|
mfn2
|
mitofusin 2 |
| chr14_+_33329761 | 0.22 |
ENSDART00000161138
|
sowahd
|
sosondowah ankyrin repeat domain family d |
| chr14_+_33329420 | 0.20 |
ENSDART00000171090
ENSDART00000164062 |
sowahd
|
sosondowah ankyrin repeat domain family d |
| chr21_-_22543611 | 0.20 |
ENSDART00000177084
|
myo5b
|
myosin VB |
| chr12_+_16452575 | 0.19 |
ENSDART00000058665
|
kif20bb
|
kinesin family member 20Bb |
| chr7_+_56472585 | 0.17 |
ENSDART00000135259
ENSDART00000073596 |
ist1
|
increased sodium tolerance 1 homolog (yeast) |
| chr12_+_16452912 | 0.17 |
ENSDART00000192467
|
kif20bb
|
kinesin family member 20Bb |
| chr6_+_11249706 | 0.14 |
ENSDART00000186547
ENSDART00000193287 |
atg9a
|
ATG9 autophagy related 9 homolog A (S. cerevisiae) |
| chr10_+_28160265 | 0.12 |
ENSDART00000022484
|
rnft1
|
ring finger protein, transmembrane 1 |
| chr18_+_44532668 | 0.10 |
ENSDART00000140672
|
st14a
|
suppression of tumorigenicity 14 (colon carcinoma) a |
| chr7_+_19482877 | 0.09 |
ENSDART00000077868
|
si:ch211-212k18.7
|
si:ch211-212k18.7 |
| chr17_-_22552678 | 0.09 |
ENSDART00000079401
|
si:ch211-125o16.4
|
si:ch211-125o16.4 |
| chr2_-_37140423 | 0.08 |
ENSDART00000144220
|
tspan37
|
tetraspanin 37 |
| chr16_+_26601364 | 0.08 |
ENSDART00000087537
|
epb41l4b
|
erythrocyte membrane protein band 4.1 like 4B |
| chr8_-_27687095 | 0.07 |
ENSDART00000086946
|
mov10b.1
|
Moloney leukemia virus 10b, tandem duplicate 1 |
| chr19_-_6303099 | 0.07 |
ENSDART00000133371
|
pou2f2a
|
POU class 2 homeobox 2a |
| chr6_+_11250033 | 0.06 |
ENSDART00000065411
ENSDART00000132677 |
atg9a
|
ATG9 autophagy related 9 homolog A (S. cerevisiae) |
| chr9_-_23765480 | 0.04 |
ENSDART00000027212
|
si:ch211-219a4.6
|
si:ch211-219a4.6 |
| chr7_+_19483277 | 0.04 |
ENSDART00000173750
|
si:ch211-212k18.7
|
si:ch211-212k18.7 |
| chr15_-_21702317 | 0.02 |
ENSDART00000155824
|
IL4I1
|
si:dkey-40g16.6 |
| chr5_+_35502290 | 0.02 |
ENSDART00000191222
|
CR762390.1
|
|
| chr2_-_26620803 | 0.01 |
ENSDART00000003946
ENSDART00000126826 |
tmem59
|
transmembrane protein 59 |
| chr7_-_8881514 | 0.01 |
ENSDART00000081620
|
vax2
|
ventral anterior homeobox 2 |
| chr16_+_19637384 | 0.00 |
ENSDART00000184773
ENSDART00000191895 ENSDART00000182020 ENSDART00000135359 |
macc1
|
metastasis associated in colon cancer 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of irf6
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0010633 | negative regulation of epithelial cell migration(GO:0010633) |
| 0.1 | 0.3 | GO:0060339 | negative regulation of type I interferon-mediated signaling pathway(GO:0060339) |
| 0.0 | 0.2 | GO:0003242 | growth involved in heart morphogenesis(GO:0003241) cardiac chamber ballooning(GO:0003242) cardiac muscle tissue growth involved in heart morphogenesis(GO:0003245) |
| 0.0 | 0.2 | GO:0048662 | regulation of smooth muscle cell proliferation(GO:0048660) negative regulation of smooth muscle cell proliferation(GO:0048662) |
| 0.0 | 0.1 | GO:1904292 | regulation of ERAD pathway(GO:1904292) |
| 0.0 | 0.2 | GO:0044805 | late nucleophagy(GO:0044805) |
| 0.0 | 0.1 | GO:0098795 | mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0043034 | costamere(GO:0043034) |
| 0.0 | 0.2 | GO:0031306 | intrinsic component of mitochondrial outer membrane(GO:0031306) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.4 | GO:0008349 | MAP kinase kinase kinase kinase activity(GO:0008349) |
| 0.0 | 0.1 | GO:0032574 | 5'-3' RNA helicase activity(GO:0032574) |