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PRJNA438478: RNAseq of wild type zebrafish germline

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Results for hoxd4a

Z-value: 0.39

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Transcription factors associated with hoxd4a

Gene Symbol Gene ID Gene Info
ENSDARG00000059276 homeobox D4a

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
hoxd4adr11_v1_chr9_-_1951144_19511440.371.3e-01Click!

Activity profile of hoxd4a motif

Sorted Z-values of hoxd4a motif

Promoter Log-likelihood Transcript Gene Gene Info
chr25_+_31868268 0.99 ENSDART00000022325
poly (ADP-ribose) polymerase family, member 16
chr25_-_10503043 0.86 ENSDART00000155404
cytochrome c oxidase subunit 8b
chr22_+_38037530 0.82 ENSDART00000012212
COMM domain containing 2
chr3_+_24361096 0.71 ENSDART00000132387
parvalbumin 6
chr20_+_36628059 0.69 ENSDART00000062898
epoxide hydrolase 1, microsomal (xenobiotic)
chr3_-_49382896 0.68 ENSDART00000169115
si:ch73-167f10.1
chr9_+_48219111 0.67 ENSDART00000111225
ENSDART00000145972
coiled-coil domain containing 173
chr12_-_990149 0.63 ENSDART00000054367
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2b
chr11_+_25259058 0.63 ENSDART00000154109
tumor protein p53 inducible nuclear protein 2
chr16_+_26017360 0.60 ENSDART00000149466
protease, serine, 59, tandem duplicate 2
chr5_-_61970674 0.59 ENSDART00000143161
zinc finger protein 541
chr2_+_16160906 0.59 ENSDART00000135783
selenoprotein J
chr15_-_45110011 0.58 ENSDART00000182047
ENSDART00000188662

chr12_+_3871452 0.55 ENSDART00000066546
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
chr5_+_42400777 0.54 ENSDART00000183114

chr19_-_1855368 0.53 ENSDART00000029646
ribosomal protein, large, P1
chr17_-_39772999 0.53 ENSDART00000155727
Pim proto-oncogene, serine/threonine kinase, related 60
chr6_-_2627488 0.53 ENSDART00000044089
ENSDART00000158333
ENSDART00000155109
hydroxypyruvate isomerase
chr2_+_2181709 0.52 ENSDART00000092763
ENSDART00000148553
coiled-coil domain containing 13
chr23_+_39695827 0.52 ENSDART00000113893
ENSDART00000186679
transmembrane and coiled-coil domains 4
chr23_+_24085531 0.49 ENSDART00000139710
tubulin tyrosine ligase-like family, member 10
chr1_+_50921266 0.49 ENSDART00000006538
orthodenticle homeobox 2a
chr23_-_42752387 0.46 ENSDART00000149781
si:ch73-217n20.1
chr5_-_18924834 0.45 ENSDART00000041371
polymerase (DNA directed) iota
chr1_+_44003654 0.45 ENSDART00000131337
si:dkey-22i16.10
chr3_+_55031685 0.44 ENSDART00000132587
N-methylpurine DNA glycosylase
chr10_-_43771447 0.44 ENSDART00000052307
arrestin domain containing 3b
chr23_+_19813677 0.42 ENSDART00000139192
ENSDART00000142308
emerin (Emery-Dreifuss muscular dystrophy)
chr5_+_26847190 0.42 ENSDART00000076742
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
chr19_+_45962016 0.42 ENSDART00000169710
UTP23, small subunit (SSU) processome component, homolog (yeast)
chr5_-_19394440 0.41 ENSDART00000163771
forkhead box N4
chr7_+_65309738 0.41 ENSDART00000169228
vesicle amine transport 1-like
chr20_-_29474859 0.41 ENSDART00000152906
ENSDART00000045249
secretogranin V
chr20_-_16171297 0.39 ENSDART00000012476
cytochrome c oxidase assembly factor 7
chr24_+_37902687 0.39 ENSDART00000042273
coiled-coil domain containing 78
chr5_+_23597144 0.38 ENSDART00000143929
ENSDART00000142420
ENSDART00000032909
K(lysine) acetyltransferase 5b
chr20_-_438646 0.38 ENSDART00000009196
UFM1-specific ligase 1
chr4_+_16885854 0.37 ENSDART00000017726
ethanolamine kinase 1
chr7_-_59311165 0.37 ENSDART00000171105
meiosis 1 associated protein
chr4_-_74892355 0.37 ENSDART00000188725
PHD finger protein 21B
chr6_+_49053319 0.37 ENSDART00000124524
synaptonemal complex protein 1
chr24_+_20536056 0.37 ENSDART00000082082
glycyl-tRNA synthetase
chr24_-_37640705 0.36 ENSDART00000066583
zgc:112496
chr2_+_54389750 0.36 ENSDART00000189236
RAB12, member RAS oncogene family
chr24_+_21621654 0.36 ENSDART00000002595
ribosomal protein L21
chr19_+_43297546 0.35 ENSDART00000168002
lysosomal protein transmembrane 5
chr7_+_22657566 0.35 ENSDART00000141048
plac8 onzin related protein 5
chr22_+_7439186 0.35 ENSDART00000190667
zgc:92041
chr7_-_41512999 0.34 ENSDART00000173577
si:dkey-10f23.2
chr15_+_42285643 0.33 ENSDART00000152731
SR-related CTD-associated factor 4b
chr20_+_30939178 0.33 ENSDART00000062556
superoxide dismutase 2, mitochondrial
chr4_+_14900042 0.32 ENSDART00000018261
aldo-keto reductase family 1, member B1 (aldose reductase)
chr14_-_32089117 0.32 ENSDART00000158014
si:ch211-69b22.5
chr2_+_33726862 0.32 ENSDART00000146745
si:dkey-31m5.5
chr17_-_24680965 0.32 ENSDART00000154880
Rho guanine nucleotide exchange factor (GEF) 33
chr5_+_24882633 0.31 ENSDART00000111302
rhomboid domain containing 3
chr7_-_27038488 0.30 ENSDART00000052731
ENSDART00000191382
nucleobindin 2a
chr12_+_20352400 0.29 ENSDART00000066383
hemoglobin, alpha embryonic 5
chr1_-_45662774 0.29 ENSDART00000042158
serine hydrolase-like
chr25_+_18563476 0.29 ENSDART00000170841
caveolin 1
chr7_-_20758825 0.28 ENSDART00000156717
ENSDART00000182629
ENSDART00000179801
chromodomain helicase DNA binding protein 3
chr15_-_14884332 0.28 ENSDART00000165237
si:ch211-24o8.4
chr19_-_47527093 0.28 ENSDART00000171379
ENSDART00000171140
ENSDART00000114886
secretogranin V
chr18_+_30508729 0.28 ENSDART00000185140
cytochrome c oxidase subunit IV isoform 1
chr6_+_30689239 0.27 ENSDART00000065206
WD repeat domain 78
chr9_+_29616854 0.26 ENSDART00000033902
ENSDART00000143493
PHD finger protein 11
chr12_+_18899396 0.26 ENSDART00000105858
X-ray repair complementing defective repair in Chinese hamster cells 6
chr16_-_41465542 0.25 ENSDART00000169116
ENSDART00000187446
copine IVa
chr7_+_12927944 0.25 ENSDART00000027329
ferritin, heavy polypeptide 1a
chr14_-_7137808 0.25 ENSDART00000054803
tRNA phosphotransferase 1
chr15_-_34658057 0.25 ENSDART00000110964
BCL2 associated athanogene 6
chr19_+_22074468 0.25 ENSDART00000136294
ENSDART00000090476
ATPase phospholipid transporting 9B
chr16_+_7242610 0.24 ENSDART00000081477
sorcin
chr22_+_37631234 0.24 ENSDART00000007346
proteasome 26S subunit, non-ATPase 1
chr10_+_39893439 0.24 ENSDART00000003435
small fragment nuclease
chr2_+_20802876 0.24 ENSDART00000142321
proteoglycan 4a
chr4_-_14915268 0.23 ENSDART00000067040
si:dkey-180p18.9
chr11_-_41220794 0.23 ENSDART00000192895
mitochondrial ribosomal protein S16
chr18_-_49318823 0.23 ENSDART00000098419
sb:cb81
chr7_-_73851280 0.23 ENSDART00000190053

chr18_+_16192083 0.23 ENSDART00000133042
leucine-rich repeats and IQ motif containing 1
chr1_-_46875493 0.23 ENSDART00000115081
1-acylglycerol-3-phosphate O-acyltransferase 3
chr24_-_21819010 0.23 ENSDART00000091096

chr15_-_21877726 0.22 ENSDART00000127819
ENSDART00000145646
ENSDART00000100897
ENSDART00000144739
zgc:162608
chr21_-_19314618 0.22 ENSDART00000188744
glycerol-3-phosphate acyltransferase 3
chr11_+_1608348 0.21 ENSDART00000162438
si:dkey-40c23.3
chr15_-_1822548 0.21 ENSDART00000082026
ENSDART00000180230
matrix metallopeptidase 28
chr14_-_5678457 0.20 ENSDART00000012116
T cell leukemia homeobox 2
chr5_-_10239079 0.20 ENSDART00000132739
si:ch73-42k18.1
chr11_-_22371105 0.20 ENSDART00000146873
transmembrane protein 183A
chr12_+_28799988 0.19 ENSDART00000022724
pyridoxamine 5'-phosphate oxidase
chr12_+_47698356 0.19 ENSDART00000112010
leucine zipper, putative tumor suppressor 2b
chr25_+_14165447 0.19 ENSDART00000145387
SH3 and multiple ankyrin repeat domains 2
chr22_-_19552796 0.19 ENSDART00000148088
ENSDART00000105485
si:dkey-78l4.14
chr22_+_37631034 0.19 ENSDART00000159016
ENSDART00000193346
proteasome 26S subunit, non-ATPase 1
chr6_+_18569453 0.18 ENSDART00000171338
ras homolog family member T1
chr23_-_44207349 0.18 ENSDART00000186276
zgc:158659
chr8_+_20951590 0.18 ENSDART00000138728
si:dkeyp-82a1.1
chr2_-_1364678 0.17 ENSDART00000011919
ENSDART00000164674
synovial sarcoma translocation, chromosome 18 (H. sapiens)
chr5_+_66433287 0.17 ENSDART00000170757
kinetochore associated 1
chr20_+_10544100 0.17 ENSDART00000113927
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
chr8_+_17069577 0.17 ENSDART00000131847
si:dkey-190g11.3
chr1_-_8192418 0.17 ENSDART00000136654
GRB2-related adaptor protein b
chr13_+_45709380 0.17 ENSDART00000192862
si:ch211-62a1.3
chr17_+_13088800 0.16 ENSDART00000149779
gem (nuclear organelle) associated protein 2
chr23_-_16485190 0.16 ENSDART00000155038
si:dkeyp-100a5.4
chr1_+_8442071 0.16 ENSDART00000143547
myosin XVAb
chr23_+_4689626 0.16 ENSDART00000131532
glycoprotein IX (platelet)
chr22_+_16555939 0.15 ENSDART00000012604
PDZK1 interacting protein 1
chr16_+_3004422 0.15 ENSDART00000189969

chr3_+_25825043 0.15 ENSDART00000153749
phosphoinositide-3-kinase, regulatory subunit 6b
chr23_+_2760573 0.15 ENSDART00000129719
DNA topoisomerase I
chr5_+_67268110 0.15 ENSDART00000148116
si:ch211-110p13.9
chr25_+_18965430 0.15 ENSDART00000169742
thymine DNA glycosylase, tandem duplicate 1
chr4_-_14315855 0.15 ENSDART00000133325
neural EGFL like 2b
chr24_+_26134209 0.15 ENSDART00000038824
teleost multiple tissue opsin b
chr9_-_52490579 0.15 ENSDART00000161667
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
chr24_+_38301080 0.14 ENSDART00000105672
myosin binding protein C, fast type b
chr20_+_18551657 0.14 ENSDART00000147001
si:dkeyp-72h1.1
chr21_-_22689805 0.14 ENSDART00000157560
ENSDART00000110792
grass carp reovirus (GCRV)-induced gene 2e
chr8_-_44004135 0.14 ENSDART00000136269
RIMS binding protein 2
chr25_-_24248000 0.14 ENSDART00000073527
SPT2 chromatin protein domain containing 1
chr11_+_36665359 0.14 ENSDART00000166144
si:ch211-11c3.9
chr6_-_43882696 0.13 ENSDART00000064938
forkhead box P1b
chr4_-_56898328 0.13 ENSDART00000169189
si:dkey-269o24.6
chr15_-_28082310 0.13 ENSDART00000152620
dehydrogenase/reductase (SDR family) member 13a, duplicate 3
chr4_+_16787488 0.13 ENSDART00000143006
golgi transport 1Ba
chr23_+_40460333 0.13 ENSDART00000184658
SOGA family member 3b
chr15_-_30816370 0.13 ENSDART00000142982
ENSDART00000050649
ENSDART00000136901
ENSDART00000100194
musashi RNA-binding protein 2b
chr21_+_9689103 0.12 ENSDART00000165132
mitogen-activated protein kinase 10
chr15_-_20400423 0.12 ENSDART00000081290
ENSDART00000156813
ENSDART00000192427
ribonuclease T2, like
chr2_+_31614533 0.12 ENSDART00000111038
ENSDART00000181311
si:ch211-106h4.6
chr7_-_38698583 0.12 ENSDART00000173900
ENSDART00000126737
CD59 molecule (CD59 blood group)
chr7_+_19495379 0.12 ENSDART00000180514
si:ch211-212k18.8
chr16_-_15988320 0.12 ENSDART00000160883

chr1_+_23784905 0.12 ENSDART00000171951
ENSDART00000188521
ENSDART00000183029
ENSDART00000187183
slit homolog 2 (Drosophila)
chr10_-_44355534 0.12 ENSDART00000160231
strawberry notch homolog 1 (Drosophila)
chr18_-_33979693 0.11 ENSDART00000021215
si:ch211-203b20.7
chr16_-_13004166 0.11 ENSDART00000133735
calcium channel, voltage-dependent, gamma subunit 7b
chr10_+_40598791 0.11 ENSDART00000131895
trace amine associated receptor 17a
chr6_-_27891961 0.11 ENSDART00000155116
im:7152348
chr17_+_32343121 0.11 ENSDART00000156051
DEAH (Asp-Glu-Ala-His) box polypeptide 32b
chr17_+_25444323 0.11 ENSDART00000030691
chloride intracellular channel 4
chr3_-_39198113 0.11 ENSDART00000102690
zgc:154169
chr5_+_36611128 0.11 ENSDART00000097684
neuro-oncological ventral antigen 1
chr13_-_7567707 0.11 ENSDART00000190296
ENSDART00000180348
paired-like homeodomain 3
chr15_+_42397125 0.10 ENSDART00000169751
T cell lymphoma invasion and metastasis 1b
chr23_-_35491587 0.10 ENSDART00000153794
family with sequence similarity 110, member C
chr14_-_413273 0.10 ENSDART00000163976
ENSDART00000179907
FAT atypical cadherin 4
chr13_-_49585385 0.10 ENSDART00000165868
translocase of outer mitochondrial membrane 20
chr25_-_18953322 0.10 ENSDART00000155927
si:ch211-68a17.7
chr22_+_18166660 0.10 ENSDART00000105432
BLOC-1 related complex subunit 8
chr25_-_13839743 0.09 ENSDART00000158780
mitogen-activated protein kinase 8 interacting protein 1a
chr4_-_43388943 0.09 ENSDART00000150796
si:dkey-29j8.2
chr15_+_23799461 0.09 ENSDART00000154885
si:ch211-167j9.4
chr10_+_40578332 0.09 ENSDART00000146155
si:ch211-238p8.18
chr6_-_39270851 0.09 ENSDART00000148839
Rho guanine nucleotide exchange factor (GEF) 25b
chr20_-_29633507 0.09 ENSDART00000040292
cleavage and polyadenylation specific factor 3
chr5_-_30491172 0.09 ENSDART00000138464
pleckstrin homology-like domain, family B, member 1a
chr5_-_66768121 0.09 ENSDART00000141095
im:7154036
chr16_-_55028740 0.08 ENSDART00000156368
ENSDART00000161704
zgc:114181
chr7_+_48761875 0.08 ENSDART00000003690
aggrecan a
chr6_+_41191482 0.08 ENSDART00000000877
opsin 1 (cone pigments), medium-wave-sensitive, 3
chr1_-_999556 0.08 ENSDART00000170884
ENSDART00000172235
phosphoribosylglycinamide formyltransferase
chr23_-_21453614 0.08 ENSDART00000079274
hairy-related 4, tandem duplicate 1
chr11_-_41996957 0.08 ENSDART00000055706
hairy and enhancer of split-related 15, tandem duplicate 2
chr11_-_27874116 0.08 ENSDART00000180579
eukaryotic translation initiation factor 4 gamma, 3a
chr2_+_20793982 0.08 ENSDART00000014785
proteoglycan 4a
chr7_+_20017211 0.08 ENSDART00000100808
B-cell CLL/lymphoma 6, member B
chr23_+_23182037 0.08 ENSDART00000137353
kelch-like family member 17
chr7_-_17570923 0.07 ENSDART00000188476
ENSDART00000080624
novel immune-type receptor 5
chr25_+_3318192 0.07 ENSDART00000146154
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b
chr18_-_30020879 0.07 ENSDART00000162086
si:ch211-220f16.2
chr19_+_7757682 0.07 ENSDART00000092138
ENSDART00000092112
ubiquitin associated protein 2-like
chr7_-_9873652 0.07 ENSDART00000006343
ankyrin repeat and SOCS box containing 7
chr7_-_24699985 0.07 ENSDART00000052802
calbindin 2b
chr1_+_50987535 0.07 ENSDART00000140657
malate dehydrogenase 1Aa, NAD (soluble)
chr21_-_13123176 0.07 ENSDART00000144866
ENSDART00000024616
family with sequence similarity 219, member Aa
chr15_-_17813680 0.07 ENSDART00000158556

chr10_+_39952995 0.07 ENSDART00000183077

chr10_-_41980797 0.07 ENSDART00000076575
ras homolog family member F
chr16_-_17578503 0.07 ENSDART00000122212
caspase 2, apoptosis-related cysteine peptidase
chr14_+_4807207 0.07 ENSDART00000167145
adaptor-related protein complex 1 associated regulatory protein
chr11_+_10975012 0.06 ENSDART00000192872
integrin, beta 6
chr2_+_37815687 0.06 ENSDART00000166352
short chain dehydrogenase/reductase family 39U, member 1
chr23_+_404975 0.06 ENSDART00000181336

chr16_-_17541890 0.06 ENSDART00000131328
chloride channel, voltage-sensitive 1b
chr5_+_59392183 0.06 ENSDART00000082983
ENSDART00000180882
CAP-GLY domain containing linker protein 2
chr13_+_30692669 0.06 ENSDART00000187818

chr4_-_815871 0.06 ENSDART00000067455
dihydropyrimidinase-like 5b
chr20_+_15600167 0.06 ENSDART00000171991
Fas ligand (TNF superfamily, member 6)
chr25_+_30074947 0.06 ENSDART00000154849
si:ch211-147k10.5
chr12_+_18681477 0.06 ENSDART00000127981
ENSDART00000143979
regulator of G protein signaling 9b
chr4_+_28364237 0.06 ENSDART00000187933
ENSDART00000150424
si:ch73-263o4.4
chr7_+_5910467 0.06 ENSDART00000173232
si:ch211-113a14.22
chr6_-_8480815 0.06 ENSDART00000162300
RAS protein activator like 3
chr4_-_18202291 0.06 ENSDART00000169704
ankyrin repeat and sterile alpha motif domain containing 1B
chr22_-_24757785 0.06 ENSDART00000078225
vitellogenin 5
chr23_-_29553430 0.05 ENSDART00000157773
ENSDART00000126384
ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)
chr8_+_28065803 0.05 ENSDART00000178481
potassium voltage-gated channel, Shal-related subfamily, member 3

Network of associatons between targets according to the STRING database.

First level regulatory network of hoxd4a

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0051026 meiotic DNA repair synthesis(GO:0000711) chiasma assembly(GO:0051026)
0.1 0.6 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 0.4 GO:1990592 IRE1-mediated unfolded protein response(GO:0036498) negative regulation of response to endoplasmic reticulum stress(GO:1903573) protein polyufmylation(GO:1990564) protein K69-linked ufmylation(GO:1990592)
0.1 0.5 GO:0046487 glyoxylate metabolic process(GO:0046487)
0.1 0.4 GO:0007060 male meiosis chromosome segregation(GO:0007060)
0.1 0.4 GO:0035881 amacrine cell differentiation(GO:0035881)
0.1 0.2 GO:0042822 water-soluble vitamin biosynthetic process(GO:0042364) pyridoxal phosphate metabolic process(GO:0042822) pyridoxal phosphate biosynthetic process(GO:0042823)
0.1 0.3 GO:0030299 intestinal cholesterol absorption(GO:0030299)
0.1 0.3 GO:0071480 response to gamma radiation(GO:0010332) cellular response to gamma radiation(GO:0071480)
0.0 0.1 GO:0010847 regulation of chromatin assembly(GO:0010847)
0.0 0.2 GO:0010872 regulation of cholesterol esterification(GO:0010872) positive regulation of cholesterol esterification(GO:0010873)
0.0 0.1 GO:0007414 axonal defasciculation(GO:0007414)
0.0 0.3 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.3 GO:0000305 response to superoxide(GO:0000303) response to oxygen radical(GO:0000305) removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451) cellular oxidant detoxification(GO:0098869) cellular detoxification(GO:1990748)
0.0 0.3 GO:0032099 negative regulation of response to food(GO:0032096) negative regulation of appetite(GO:0032099)
0.0 0.7 GO:0009636 response to toxic substance(GO:0009636)
0.0 0.5 GO:0003406 retinal pigment epithelium development(GO:0003406)
0.0 0.5 GO:0019985 translesion synthesis(GO:0019985)
0.0 1.0 GO:0006471 protein ADP-ribosylation(GO:0006471)
0.0 0.3 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.2 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.2 GO:0051013 microtubule severing(GO:0051013)
0.0 0.6 GO:0010508 positive regulation of autophagy(GO:0010508)
0.0 0.3 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0010172 embryonic body morphogenesis(GO:0010172)
0.0 0.1 GO:0099509 regulation of presynaptic cytosolic calcium ion concentration(GO:0099509) regulation of long-term synaptic potentiation(GO:1900271)
0.0 0.1 GO:0071435 potassium ion export(GO:0071435) potassium ion export across plasma membrane(GO:0097623)
0.0 0.1 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.0 0.1 GO:0010812 negative regulation of cell-substrate adhesion(GO:0010812)
0.0 0.1 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.0 0.6 GO:0006284 base-excision repair(GO:0006284)
0.0 0.7 GO:0046883 regulation of hormone secretion(GO:0046883)
0.0 0.1 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.0 0.1 GO:0003151 outflow tract morphogenesis(GO:0003151)
0.0 0.3 GO:0042744 oxygen transport(GO:0015671) hydrogen peroxide catabolic process(GO:0042744)
0.0 0.7 GO:0006119 oxidative phosphorylation(GO:0006119)
0.0 0.1 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.4 GO:0032482 Rab protein signal transduction(GO:0032482)
0.0 0.2 GO:0034643 establishment of mitochondrion localization, microtubule-mediated(GO:0034643) mitochondrion transport along microtubule(GO:0047497) establishment of mitochondrion localization(GO:0051654)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0034515 proteasome storage granule(GO:0034515)
0.1 0.4 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.4 GO:0043073 germ cell nucleus(GO:0043073)
0.1 1.0 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.1 1.1 GO:0045277 respiratory chain complex IV(GO:0045277)
0.0 0.5 GO:0034451 centriolar satellite(GO:0034451)
0.0 0.6 GO:0030663 COPI-coated vesicle membrane(GO:0030663)
0.0 0.4 GO:0032593 insulin-responsive compartment(GO:0032593)
0.0 0.3 GO:0071818 BAT3 complex(GO:0071818)
0.0 0.3 GO:0031838 haptoglobin-hemoglobin complex(GO:0031838)
0.0 0.3 GO:0005944 phosphatidylinositol 3-kinase complex, class IB(GO:0005944) phosphatidylinositol 3-kinase complex, class I(GO:0097651)
0.0 0.1 GO:0034685 integrin alphav-beta6 complex(GO:0034685)
0.0 0.1 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.2 GO:0032797 SMN complex(GO:0032797)
0.0 0.2 GO:0042627 chylomicron(GO:0042627)
0.0 0.6 GO:0016605 PML body(GO:0016605)
0.0 0.2 GO:0031307 integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.4 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.4 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.2 GO:0000314 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.1 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0033961 cis-stilbene-oxide hydrolase activity(GO:0033961)
0.2 0.6 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.4 GO:0071568 UFM1 transferase activity(GO:0071568)
0.1 0.3 GO:0004377 GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity(GO:0004377)
0.1 0.4 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.1 GO:0036310 annealing helicase activity(GO:0036310)
0.0 0.2 GO:0060228 phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228)
0.0 1.1 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.3 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 0.5 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.6 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.0 0.4 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841)
0.0 0.1 GO:0070891 lipoteichoic acid binding(GO:0070891)
0.0 0.1 GO:0001042 RNA polymerase I core binding(GO:0001042)
0.0 1.4 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.3 GO:0031720 haptoglobin binding(GO:0031720)
0.0 0.3 GO:0008199 ferric iron binding(GO:0008199)
0.0 0.4 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.5 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.2 GO:0052812 phosphatidylinositol-4,5-bisphosphate 3-kinase activity(GO:0046934) phosphatidylinositol-3,4-bisphosphate 5-kinase activity(GO:0052812)
0.0 0.1 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.0 0.1 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.0 0.1 GO:0004705 JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909)
0.0 0.3 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.2 GO:0003917 DNA topoisomerase type I activity(GO:0003917)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID ALK1 PATHWAY ALK1 signaling events
0.0 0.3 PID DNA PK PATHWAY DNA-PK pathway in nonhomologous end joining
0.0 0.5 PID FOXO PATHWAY FoxO family signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 REACTOME INTEGRATION OF PROVIRUS Genes involved in Integration of provirus
0.0 0.4 REACTOME BASE FREE SUGAR PHOSPHATE REMOVAL VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY Genes involved in Base-free sugar-phosphate removal via the single-nucleotide replacement pathway
0.0 0.4 REACTOME SYNTHESIS OF PE Genes involved in Synthesis of PE
0.0 0.2 REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
0.0 0.2 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.4 REACTOME MITOCHONDRIAL TRNA AMINOACYLATION Genes involved in Mitochondrial tRNA aminoacylation
0.0 0.1 REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS Genes involved in Activation of the AP-1 family of transcription factors
0.0 0.3 REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D Genes involved in Metabolism of steroid hormones and vitamins A and D
0.0 0.4 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.0 0.4 REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES Genes involved in Cross-presentation of soluble exogenous antigens (endosomes)
0.0 0.2 REACTOME SYNTHESIS OF PA Genes involved in Synthesis of PA