Project

PRJNA438478: RNAseq of wild type zebrafish germline

Navigation
Downloads

Results for foxn1

Z-value: 0.43

Motif logo

Transcription factors associated with foxn1

Gene Symbol Gene ID Gene Info
ENSDARG00000011879 forkhead box N1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
foxn1dr11_v1_chr15_-_28148314_28148314-0.371.4e-01Click!

Activity profile of foxn1 motif

Sorted Z-values of foxn1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_+_29794058 1.11 ENSDART00000045410
Thy-1 cell surface antigen
chr3_+_7763114 1.11 ENSDART00000057434
hook microtubule-tethering protein 2
chr8_+_16758304 0.96 ENSDART00000133514
ELOVL fatty acid elongase 7a
chr15_-_37104165 0.92 ENSDART00000165867
zmp:0000001114
chr22_-_817479 0.92 ENSDART00000123487
zgc:153675
chr22_-_38459316 0.88 ENSDART00000149683
ENSDART00000098461
protein tyrosine kinase 7a
chr11_-_23687158 0.88 ENSDART00000189599
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
chr14_+_22132896 0.84 ENSDART00000138274
cyclin G1
chr9_+_21793565 0.83 ENSDART00000134915
REV1, polymerase (DNA directed)
chr9_-_41090048 0.77 ENSDART00000131681
ENSDART00000182552
asparagine synthetase domain containing 1
chr17_-_53022822 0.71 ENSDART00000103434
zgc:154061
chr20_-_13625588 0.70 ENSDART00000078893
synaptotagmin-like 3
chr8_-_25846188 0.69 ENSDART00000128829
EF-hand domain family, member D2
chr10_-_15854743 0.68 ENSDART00000092343
tight junction protein 2a (zona occludens 2)
chr3_+_58472305 0.67 ENSDART00000154122
si:ch211-165g14.1
chr5_-_54554583 0.66 ENSDART00000158865
ENSDART00000158069
Sjogren syndrome nuclear autoantigen 1
chr18_-_39787040 0.66 ENSDART00000169916
Dmx-like 2
chr2_-_42492201 0.65 ENSDART00000180762
ENSDART00000009093
extended synaptotagmin-like protein 2a
chr19_+_7173613 0.64 ENSDART00000001331
hydroxysteroid (17-beta) dehydrogenase 8
chr5_-_52216170 0.64 ENSDART00000158542
ENSDART00000192981
leucyl/cystinyl aminopeptidase
chr20_-_6196989 0.63 ENSDART00000013343
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
chr12_-_10674606 0.62 ENSDART00000157919
mediator complex subunit 24
chr13_-_21650404 0.61 ENSDART00000078352
tetraspanin 14
chr21_-_4849029 0.61 ENSDART00000168930
ENSDART00000151019
notch 1a
chr25_+_7532811 0.61 ENSDART00000161593
phosphatidylserine synthase 2
chr23_+_19590006 0.60 ENSDART00000021231
sarcolemma associated protein b
chr21_+_18405585 0.60 ENSDART00000139318
si:dkey-1d7.3
chr14_-_46198373 0.60 ENSDART00000031640
ENSDART00000132966
zgc:113425
chr3_-_18805225 0.59 ENSDART00000133471
ENSDART00000131758
methionine sulfoxide reductase B1a
chr4_+_23117557 0.58 ENSDART00000066909
solute carrier family 35, member E3
chr2_-_2096055 0.58 ENSDART00000126566
solute carrier family 22, member 23
chr23_+_6586467 0.58 ENSDART00000081763
ENSDART00000121480
RNA binding motif protein 38
chr21_-_35325466 0.58 ENSDART00000134780
ENSDART00000145930
ENSDART00000076715
ENSDART00000065341
ENSDART00000162189
ubiquitin-like domain containing CTD phosphatase 1
chr19_-_6193448 0.56 ENSDART00000151405
Ets2 repressor factor
chr15_+_34963316 0.56 ENSDART00000153840
si:ch73-95l15.5
chr2_+_42871831 0.56 ENSDART00000171393
EFR3 homolog A (S. cerevisiae)
chr21_+_21743599 0.56 ENSDART00000101700
polymerase (DNA-directed), delta 3, accessory subunit
chr17_+_24064014 0.55 ENSDART00000182782
ENSDART00000139063
ENSDART00000132755
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b
chr17_-_23895026 0.55 ENSDART00000122108
PDZ domain containing 8
chr16_-_51072406 0.55 ENSDART00000083777
argonaute RISC catalytic component 3a
chr23_-_10786400 0.54 ENSDART00000055038
RING1 and YY1 binding protein a
chr25_-_34845302 0.52 ENSDART00000039485
GABA(A) receptor-associated protein like 2
chr9_+_54984900 0.51 ENSDART00000191622
motile sperm domain containing 2
chr14_+_22132388 0.51 ENSDART00000109065
cyclin G1
chr10_+_29137482 0.49 ENSDART00000178280
phosphatidylinositol binding clathrin assembly protein a
chr20_+_51730658 0.49 ENSDART00000010271
axin interactor, dorsalization associated
chr7_+_22801465 0.49 ENSDART00000052862
ENSDART00000173633
RNA binding motif protein 4.1
chr9_-_41090343 0.49 ENSDART00000187769
ENSDART00000180078
ENSDART00000166785
asparagine synthetase domain containing 1
chr9_-_46415847 0.49 ENSDART00000009790
connexin 43.4
chr16_-_31351419 0.49 ENSDART00000178298
ENSDART00000018091
maestro heat-like repeat family member 1
chr12_-_25150239 0.48 ENSDART00000038415
ENSDART00000135368
ras homolog family member Q
chr7_+_24153070 0.47 ENSDART00000076735
low density lipoprotein receptor-related protein 10
chr6_-_7686594 0.47 ENSDART00000091836
ENSDART00000151697
ubinuclein 2a
chr9_+_54984537 0.47 ENSDART00000029528
motile sperm domain containing 2
chr5_+_23045096 0.46 ENSDART00000171719
alpha thalassemia/mental retardation syndrome X-linked, like
chr19_-_6193067 0.46 ENSDART00000092656
ENSDART00000140347
Ets2 repressor factor
chr7_+_24006875 0.45 ENSDART00000033755
homeobox and leucine zipper encoding b
chr6_+_40992409 0.45 ENSDART00000151419
transforming growth factor, alpha
chr2_+_16696052 0.45 ENSDART00000022356
ENSDART00000164329
protein phosphatase 1, regulatory (inhibitor) subunit 7
chr16_+_23531583 0.44 ENSDART00000146708
adenosine deaminase, RNA-specific
chr7_+_40083601 0.44 ENSDART00000099046
zgc:112356
chr7_-_60351876 0.44 ENSDART00000098563
phospholipase C, beta 3 (phosphatidylinositol-specific)
chr16_+_50741154 0.44 ENSDART00000101627
zgc:110372
chr6_+_59832786 0.43 ENSDART00000154985
ENSDART00000102148
DEAD (Asp-Glu-Ala-Asp) box helicase 3b
chr21_+_21279159 0.43 ENSDART00000148346
inositol-trisphosphate 3-kinase Ca
chr15_-_34878388 0.43 ENSDART00000154094
mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a
chr10_+_3428194 0.43 ENSDART00000081599
protein tyrosine phosphatase, non-receptor type 11, a
chr10_+_36695597 0.42 ENSDART00000169015
ENSDART00000171392
RAB6A, member RAS oncogene family
chr7_-_60351537 0.42 ENSDART00000159875
phospholipase C, beta 3 (phosphatidylinositol-specific)
chr6_+_12504462 0.42 ENSDART00000171460
serine/threonine kinase 24b (STE20 homolog, yeast)
chr5_-_19932621 0.42 ENSDART00000088881
G protein-coupled receptor kinase interacting ArfGAP 2a
chr10_+_375042 0.42 ENSDART00000171854
si:ch1073-303d10.1
chr6_-_42377307 0.41 ENSDART00000129302
ER membrane protein complex subunit 3
chr25_+_7532627 0.41 ENSDART00000187660
phosphatidylserine synthase 2
chr17_-_16324565 0.40 ENSDART00000030835
homeobox containing 1a
chr16_-_2390931 0.40 ENSDART00000149463
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1
chr13_+_32454262 0.39 ENSDART00000057421
retinol dehydrogenase 14a
chr10_+_29138021 0.39 ENSDART00000025227
ENSDART00000123033
ENSDART00000034242
phosphatidylinositol binding clathrin assembly protein a
chr17_+_44030692 0.39 ENSDART00000049503
pellino E3 ubiquitin protein ligase family member 2
chr13_+_2442841 0.38 ENSDART00000114456
ENSDART00000137124
ENSDART00000193737
ENSDART00000189722
ENSDART00000187485
ARFGEF family member 3
chr14_+_22457230 0.38 ENSDART00000019296
growth differentiation factor 9
chr23_+_30898013 0.38 ENSDART00000146859
Cdk5 and Abl enzyme substrate 2a
chr16_-_31505802 0.37 ENSDART00000147616
si:ch211-251p5.5
chr18_+_39106722 0.37 ENSDART00000122377
BCL2 like 10
chr7_+_34236238 0.36 ENSDART00000052474
timeless interacting protein
chr11_+_18183220 0.36 ENSDART00000113468

chr25_-_25142387 0.36 ENSDART00000031814
tumor susceptibility 101a
chr8_+_23639124 0.34 ENSDART00000083108
5'-nucleotidase domain containing 2
chr2_+_38055529 0.34 ENSDART00000145642
si:rp71-1g18.1
chr5_+_63288599 0.34 ENSDART00000140065
si:ch73-37h15.2
chr16_-_27161410 0.34 ENSDART00000177503

chr8_+_36503797 0.34 ENSDART00000184785
solute carrier family 7, member 4
chr17_-_8656155 0.34 ENSDART00000148990
C-terminal binding protein 2a
chr19_+_9232676 0.34 ENSDART00000136957
lysine (K)-specific methyltransferase 2Ba
chr24_-_41267184 0.33 ENSDART00000063504
xylulokinase homolog (H. influenzae)
chr7_+_66884291 0.33 ENSDART00000187499
SET binding factor 2
chr15_+_19335646 0.33 ENSDART00000062569
acyl-CoA dehydrogenase family, member 8
chr4_-_12102025 0.33 ENSDART00000048391
ENSDART00000023894
B-Raf proto-oncogene, serine/threonine kinase
chr6_-_3998199 0.33 ENSDART00000059212
unc-50 homolog (C. elegans)
chr19_-_46088429 0.32 ENSDART00000161385
phosphatidylserine synthase 1b
chr7_+_66884570 0.32 ENSDART00000082664
SET binding factor 2
chr22_-_10156581 0.32 ENSDART00000168304
RanBP-type and C3HC4-type zinc finger containing 1
chr3_-_29891456 0.31 ENSDART00000151677
ENSDART00000014021
solute carrier family 25, member 39
chr18_+_16715864 0.31 ENSDART00000079758
eukaryotic translation initiation factor 4, gamma 2b
chr8_+_36500061 0.31 ENSDART00000185840
solute carrier family 7, member 4
chr24_+_19210001 0.31 ENSDART00000179373
ENSDART00000139299
zgc:162928
chr10_-_76352 0.30 ENSDART00000186560
ENSDART00000144722
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a
chr24_+_35387517 0.30 ENSDART00000058571
snail family zinc finger 2
chr19_-_2861444 0.30 ENSDART00000169053
C-type lectin domain family 3, member Bb
chr21_+_26028947 0.30 ENSDART00000028007
SPT6 homolog, histone chaperone
chr16_-_48430272 0.30 ENSDART00000005927
RAD21 cohesin complex component a
chr10_-_35177257 0.30 ENSDART00000077426
POM121 transmembrane nucleoporin
chr16_+_20871021 0.30 ENSDART00000006429
3-hydroxyisobutyrate dehydrogenase b
chr8_+_1284784 0.29 ENSDART00000061663
F-box and leucine-rich repeat protein 17
chr25_+_3549841 0.29 ENSDART00000164030
coiled-coil domain containing 77
chr13_-_25750910 0.29 ENSDART00000111567
sphingosine-1-phosphate lyase 1
chr5_-_52215926 0.29 ENSDART00000163973
ENSDART00000193602
leucyl/cystinyl aminopeptidase
chr21_+_1119046 0.29 ENSDART00000184678

chr1_+_11107688 0.29 ENSDART00000109858
kinetochore-localized astrin/SPAG5 binding protein
chr16_+_26547152 0.28 ENSDART00000141393
protein tyrosine phosphatase, non-receptor type 3
chr15_-_47458034 0.28 ENSDART00000168527
inositol polyphosphate phosphatase-like 1a
chr5_-_30382925 0.28 ENSDART00000125381
grass carp reovirus (GCRV)-induced gene 2o
chr6_+_34038963 0.28 ENSDART00000057732
ENSDART00000192496
adaptor-related protein complex 1, mu 3 subunit
chr19_-_29303788 0.28 ENSDART00000112167
serum response factor binding protein 1
chr16_+_11242443 0.28 ENSDART00000024935
glycogen synthase kinase 3 alpha b
chr8_-_21071711 0.27 ENSDART00000111600
ENSDART00000135204
ENSDART00000131371
ENSDART00000146532
ENSDART00000137606
zgc:112962
chr8_-_21071476 0.27 ENSDART00000184184
ENSDART00000100288
zgc:112962
chr13_-_4018888 0.27 ENSDART00000058238
tight junction associated protein 1 (peripheral)
chr2_+_35732652 0.27 ENSDART00000052666
RAS protein activator like 2
chr21_-_3700334 0.27 ENSDART00000137844
ATPase phospholipid transporting 8B1
chr9_-_52598343 0.26 ENSDART00000167922
X-ray repair complementing defective repair in Chinese hamster cells 5
chr16_+_48460873 0.26 ENSDART00000159902
exostosin glycosyltransferase 1a
chr20_-_25445237 0.26 ENSDART00000145034
ENSDART00000018049
mitochondrial ribosomal protein L19
chr1_+_44523516 0.26 ENSDART00000147702
zinc finger, DHHC-type containing 5a
chr6_-_45949121 0.26 ENSDART00000058555
TAR DNA binding protein
chr8_+_52530889 0.25 ENSDART00000127729
ENSDART00000170360
ENSDART00000162687
STAM binding protein b
chr7_+_13491452 0.25 ENSDART00000053535
ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like
chr25_+_7346800 0.25 ENSDART00000154404
pseudopodium-enriched atypical kinase 1
chr8_+_18010568 0.25 ENSDART00000121984
single stranded DNA binding protein 3b
chr2_-_6292510 0.25 ENSDART00000092182
protein phosphatase, Mg2+/Mn2+ dependent, 1La
chr8_+_7778770 0.24 ENSDART00000171325
transcription factor binding to IGHM enhancer 3a
chr8_+_22277198 0.24 ENSDART00000005989
DNA fragmentation factor, beta polypeptide (caspase-activated DNase)
chr20_-_50014936 0.24 ENSDART00000148892
exostosin-like glycosyltransferase 3
chr8_+_32722842 0.23 ENSDART00000147594
hemicentin 2
chr16_-_13881139 0.23 ENSDART00000138904
ENSDART00000090221
ENSDART00000135099
CDC42 effector protein (Rho GTPase binding) 5
chr1_-_25144439 0.23 ENSDART00000132355
F-box and WD repeat domain containing 7
chr7_+_69528850 0.23 ENSDART00000109507
Rap1 GTPase-GDP dissociation stimulator 1
chr25_+_2776511 0.23 ENSDART00000115280
neogenin 1b
chr1_+_41690402 0.22 ENSDART00000177298
F-box protein 41
chr3_-_29891218 0.22 ENSDART00000142118
solute carrier family 25, member 39
chr8_-_18010735 0.22 ENSDART00000125014
acyl-CoA thioesterase 11b
chr25_+_3549401 0.22 ENSDART00000166312
coiled-coil domain containing 77
chr1_-_59313465 0.21 ENSDART00000158067
ENSDART00000159419
thioredoxin domain containing 11
chr25_-_16782394 0.21 ENSDART00000019413
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9a
chr8_+_18010978 0.21 ENSDART00000039887
ENSDART00000144532
single stranded DNA binding protein 3b
chr16_-_6205790 0.21 ENSDART00000038495
catenin (cadherin-associated protein), beta 1
chr3_+_15773991 0.20 ENSDART00000089923
zinc finger protein 652
chr19_-_7272921 0.20 ENSDART00000102075
ENSDART00000132887
ENSDART00000130234
ENSDART00000193535
ENSDART00000136528
retinoid x receptor, beta a
chr12_-_4632519 0.20 ENSDART00000110514
proline rich 12a
chr17_-_2584423 0.20 ENSDART00000013506
zona pellucida glycoprotein 3, tandem duplicate 2
chr2_+_37480669 0.19 ENSDART00000029801
signal peptide peptidase-like 2
chr21_+_4256291 0.19 ENSDART00000148138
leucine rich repeat containing 8 VRAC subunit Aa
chr18_-_41160975 0.19 ENSDART00000187517

chr13_-_51247529 0.19 ENSDART00000191774
ENSDART00000083788

chr4_-_4751981 0.19 ENSDART00000147436
ENSDART00000092984
ENSDART00000158466
cAMP responsive element binding protein 3-like 2
chr20_+_54333774 0.19 ENSDART00000144633
CLOCK-interacting pacemaker b
chr9_-_28399071 0.19 ENSDART00000104317
ENSDART00000064343
Kruppel-like factor 7b
chr12_-_13318944 0.18 ENSDART00000152201
ENSDART00000041394
ER membrane protein complex subunit 9
chr8_-_5220125 0.18 ENSDART00000035676
BCL2 interacting protein 3 like a
chr17_+_37301860 0.18 ENSDART00000181531
ENSDART00000075978
ELM2 and Myb/SANT-like domain containing 1b
chr15_+_2559875 0.18 ENSDART00000178505
SH2B adaptor protein 2
chr18_-_16937008 0.18 ENSDART00000100117
ENSDART00000022640
ENSDART00000136541
zinc finger protein 143b
chr13_+_18321140 0.17 ENSDART00000180947
eukaryotic translation initiation factor 4E family member 1c
chr20_-_28884800 0.17 ENSDART00000134564
ENSDART00000132127
ENSDART00000135506
ENSDART00000075515
serine/arginine-rich splicing factor 5b
chr13_-_25284716 0.17 ENSDART00000039828
vinculin a
chr13_+_2448251 0.17 ENSDART00000188361
ARFGEF family member 3
chr10_+_18877362 0.17 ENSDART00000138334
protein phosphatase 2, regulatory subunit B, alpha b
chr12_+_3723650 0.17 ENSDART00000179922
ENSDART00000152482
ENSDART00000108771
PAXIP1 associated glutamate-rich protein 1
chr10_-_1180314 0.17 ENSDART00000114261
bone morphogenetic protein receptor, type IBb
chr3_+_56574623 0.17 ENSDART00000130877
Rac family small GTPase 1b
chr17_-_32370047 0.17 ENSDART00000145487
Kruppel-like factor 11b
chr21_-_42876565 0.17 ENSDART00000126480
zmp:0000001268
chr7_-_19068539 0.16 ENSDART00000108787
NADH dehydrogenase (ubiquinone) Fe-S protein 2
chr5_+_51248784 0.16 ENSDART00000159571
ENSDART00000189513
ENSDART00000092285
mutS homolog 3 (E. coli)
chr2_-_32386791 0.16 ENSDART00000056634
upstream binding transcription factor, like
chr10_-_35108683 0.16 ENSDART00000049633
zgc:110006
chr12_+_19320657 0.16 ENSDART00000100075
ENSDART00000066389
transmembrane protein 184ba
chr10_+_37500234 0.16 ENSDART00000132096
ENSDART00000099473
musashi RNA-binding protein 2a
chr5_-_35200590 0.15 ENSDART00000051271
FCH domain only 2
chr11_+_23933016 0.15 ENSDART00000000486
contactin 2
chr4_-_287425 0.15 ENSDART00000159128
enoyl CoA hydratase domain containing 3
chr5_-_18962794 0.15 ENSDART00000145210
ankyrin repeat and LEM domain containing 2
chr4_-_16883051 0.15 ENSDART00000124627
serine/threonine kinase receptor associated protein
chr13_+_1439152 0.15 ENSDART00000159047
si:ch211-165e15.1
chr5_+_38886499 0.15 ENSDART00000076845
Fraser extracellular matrix complex subunit 1
chr19_-_10295173 0.14 ENSDART00000136697
CCR4-NOT transcription complex, subunit 3b
chr13_-_25284379 0.14 ENSDART00000124167
vinculin a
chr18_+_45645357 0.14 ENSDART00000010256
eukaryotic translation initiation factor 3, subunit M
chr17_+_34186632 0.14 ENSDART00000014306
membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5)
chr18_+_619619 0.14 ENSDART00000159846
protogenin homolog a (Gallus gallus)

Network of associatons between targets according to the STRING database.

First level regulatory network of foxn1

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0006529 asparagine biosynthetic process(GO:0006529)
0.2 0.7 GO:0097401 regulation of cellular pH reduction(GO:0032847) synaptic vesicle lumen acidification(GO:0097401) regulation of synaptic vesicle lumen acidification(GO:1901546)
0.2 0.8 GO:0070987 error-free translesion synthesis(GO:0070987)
0.2 0.6 GO:0021531 spinal cord radial glial cell differentiation(GO:0021531)
0.2 0.6 GO:0070914 UV-damage excision repair(GO:0070914)
0.1 1.3 GO:0006659 phosphatidylserine biosynthetic process(GO:0006659)
0.1 0.4 GO:2000378 negative regulation of reactive oxygen species metabolic process(GO:2000378)
0.1 0.4 GO:0030237 female sex determination(GO:0030237)
0.1 0.3 GO:0005997 xylulose metabolic process(GO:0005997)
0.1 0.9 GO:2000095 cerebrospinal fluid circulation(GO:0090660) regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000095)
0.1 0.5 GO:0051659 maintenance of mitochondrion location(GO:0051659)
0.1 0.5 GO:0043111 replication fork arrest(GO:0043111)
0.1 0.5 GO:0046329 negative regulation of JUN kinase activity(GO:0043508) negative regulation of JNK cascade(GO:0046329)
0.1 0.2 GO:0031642 negative regulation of myelination(GO:0031642) negative regulation of neurological system process(GO:0031645)
0.1 1.2 GO:0090279 regulation of calcium ion import(GO:0090279)
0.1 0.2 GO:1901004 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 0.2 GO:2000055 positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification(GO:2000055)
0.1 0.3 GO:0097039 protein linear polyubiquitination(GO:0097039)
0.1 0.6 GO:0060575 intestinal epithelial cell differentiation(GO:0060575)
0.1 0.2 GO:0070278 extracellular matrix constituent secretion(GO:0070278)
0.1 0.3 GO:0003173 ventriculo bulbo valve development(GO:0003173)
0.1 0.4 GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence(GO:0045050)
0.1 0.3 GO:0051988 regulation of attachment of spindle microtubules to kinetochore(GO:0051988)
0.1 0.5 GO:0072091 regulation of stem cell proliferation(GO:0072091)
0.1 0.3 GO:0010332 response to gamma radiation(GO:0010332) cellular response to gamma radiation(GO:0071480)
0.1 0.3 GO:0086013 membrane repolarization during cardiac muscle cell action potential(GO:0086013)
0.1 0.2 GO:0048677 axon extension involved in regeneration(GO:0048677) sprouting of injured axon(GO:0048682)
0.1 0.3 GO:0070734 histone H3-K27 methylation(GO:0070734)
0.0 0.4 GO:2000273 positive regulation of epidermal growth factor-activated receptor activity(GO:0045741) positive regulation of receptor activity(GO:2000273)
0.0 0.3 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.3 GO:0070073 clustering of voltage-gated calcium channels(GO:0070073)
0.0 0.2 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.0 0.9 GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.0 1.0 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.2 GO:0017145 stem cell division(GO:0017145)
0.0 0.3 GO:0090024 negative regulation of leukocyte chemotaxis(GO:0002689) negative regulation of granulocyte chemotaxis(GO:0071623) negative regulation of neutrophil chemotaxis(GO:0090024) negative regulation of neutrophil migration(GO:1902623)
0.0 0.6 GO:0030311 poly-N-acetyllactosamine metabolic process(GO:0030309) poly-N-acetyllactosamine biosynthetic process(GO:0030311)
0.0 0.2 GO:0031293 membrane protein intracellular domain proteolysis(GO:0031293)
0.0 0.4 GO:0006382 adenosine to inosine editing(GO:0006382)
0.0 0.3 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 0.1 GO:0016332 establishment or maintenance of polarity of embryonic epithelium(GO:0016332)
0.0 0.2 GO:0006921 apoptotic DNA fragmentation(GO:0006309) cellular component disassembly involved in execution phase of apoptosis(GO:0006921) apoptotic nuclear changes(GO:0030262)
0.0 0.2 GO:0090497 mesenchymal cell migration(GO:0090497)
0.0 1.0 GO:0048268 clathrin coat assembly(GO:0048268)
0.0 0.9 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.7 GO:0090557 establishment of endothelial intestinal barrier(GO:0090557)
0.0 0.5 GO:0043562 cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.0 0.2 GO:0021634 optic nerve formation(GO:0021634)
0.0 0.3 GO:0006363 termination of RNA polymerase I transcription(GO:0006363)
0.0 0.6 GO:0006688 glycosphingolipid biosynthetic process(GO:0006688)
0.0 0.2 GO:0031274 pseudopodium organization(GO:0031268) pseudopodium assembly(GO:0031269) regulation of pseudopodium assembly(GO:0031272) positive regulation of pseudopodium assembly(GO:0031274)
0.0 0.5 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 0.1 GO:0035633 maintenance of blood-brain barrier(GO:0035633)
0.0 1.1 GO:1904029 regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029)
0.0 0.2 GO:0097345 mitochondrial outer membrane permeabilization(GO:0097345)
0.0 0.5 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.2 GO:0045670 regulation of osteoclast differentiation(GO:0045670)
0.0 0.1 GO:0023041 neuronal signal transduction(GO:0023041)
0.0 1.1 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.2 GO:0070262 peptidyl-serine dephosphorylation(GO:0070262)
0.0 0.2 GO:0007084 mitotic nuclear envelope reassembly(GO:0007084)
0.0 0.3 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.0 0.1 GO:0060394 negative regulation of pathway-restricted SMAD protein phosphorylation(GO:0060394)
0.0 0.1 GO:0030579 ubiquitin-dependent SMAD protein catabolic process(GO:0030579)
0.0 0.1 GO:0031627 telomeric loop formation(GO:0031627)
0.0 0.1 GO:0034063 stress granule assembly(GO:0034063)
0.0 0.7 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.1 GO:2000036 regulation of stem cell population maintenance(GO:2000036)
0.0 0.0 GO:2000257 complement activation, alternative pathway(GO:0006957) regulation of protein activation cascade(GO:2000257)
0.0 0.1 GO:0019262 N-acetylneuraminate catabolic process(GO:0019262)
0.0 0.5 GO:0015012 heparan sulfate proteoglycan biosynthetic process(GO:0015012)
0.0 0.1 GO:0070934 CRD-mediated mRNA stabilization(GO:0070934)
0.0 0.6 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.3 GO:0097192 signal transduction in absence of ligand(GO:0038034) extrinsic apoptotic signaling pathway in absence of ligand(GO:0097192)
0.0 0.2 GO:0035803 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0 0.0 GO:0007250 activation of NF-kappaB-inducing kinase activity(GO:0007250)
0.0 0.2 GO:0060999 positive regulation of dendritic spine development(GO:0060999)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0043291 RAVE complex(GO:0043291)
0.1 0.5 GO:0044233 ER-mitochondrion membrane contact site(GO:0044233)
0.1 0.6 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.1 0.9 GO:0098888 presynaptic endocytic zone(GO:0098833) presynaptic endocytic zone membrane(GO:0098835) extrinsic component of presynaptic membrane(GO:0098888) extrinsic component of presynaptic endocytic zone(GO:0098894)
0.1 0.3 GO:0035327 transcriptionally active chromatin(GO:0035327)
0.1 0.4 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.5 GO:0016442 RISC complex(GO:0016442) RNAi effector complex(GO:0031332)
0.1 0.6 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.2 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553)
0.0 0.3 GO:0030892 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.0 0.3 GO:0071797 LUBAC complex(GO:0071797)
0.0 0.2 GO:0005913 cell-cell adherens junction(GO:0005913) zonula adherens(GO:0005915)
0.0 1.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.3 GO:0034451 centriolar satellite(GO:0034451)
0.0 0.5 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.2 GO:0030126 COPI vesicle coat(GO:0030126)
0.0 0.1 GO:0031464 inclusion body(GO:0016234) Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 1.0 GO:0032580 Golgi cisterna membrane(GO:0032580)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.9 GO:0005942 phosphatidylinositol 3-kinase complex(GO:0005942)
0.0 0.5 GO:0000421 autophagosome membrane(GO:0000421)
0.0 0.5 GO:0000781 chromosome, telomeric region(GO:0000781)
0.0 1.8 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.0 0.7 GO:0016592 mediator complex(GO:0016592)
0.0 0.1 GO:0030015 CCR4-NOT core complex(GO:0030015)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity(GO:0004066)
0.2 0.6 GO:0008489 UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity(GO:0008489)
0.1 0.6 GO:0033745 L-methionine-(R)-S-oxide reductase activity(GO:0033745)
0.1 1.0 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217)
0.1 0.4 GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity(GO:0003827)
0.1 0.3 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.1 0.3 GO:0008117 sphinganine-1-phosphate aldolase activity(GO:0008117)
0.1 0.9 GO:0005545 1-phosphatidylinositol binding(GO:0005545)
0.1 0.5 GO:0016530 metallochaperone activity(GO:0016530)
0.1 0.3 GO:0050508 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity(GO:0050508)
0.1 1.4 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.1 0.6 GO:0008429 phosphatidylethanolamine binding(GO:0008429)
0.1 0.4 GO:0070698 type I activin receptor binding(GO:0070698)
0.1 0.5 GO:0035198 miRNA binding(GO:0035198)
0.0 0.9 GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005)
0.0 1.0 GO:0009922 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.4 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.2 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.0 0.4 GO:0003726 double-stranded RNA adenosine deaminase activity(GO:0003726)
0.0 0.6 GO:0008532 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532)
0.0 0.8 GO:0048038 quinone binding(GO:0048038)
0.0 0.4 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.0 0.2 GO:0036042 long-chain fatty acyl-CoA binding(GO:0036042)
0.0 0.9 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.0 0.2 GO:0030331 estrogen receptor binding(GO:0030331)
0.0 0.7 GO:0042043 neurexin family protein binding(GO:0042043)
0.0 0.4 GO:0000828 inositol hexakisphosphate kinase activity(GO:0000828)
0.0 1.1 GO:0051959 dynein light intermediate chain binding(GO:0051959)
0.0 0.6 GO:0005338 nucleotide-sugar transmembrane transporter activity(GO:0005338)
0.0 0.6 GO:0005112 Notch binding(GO:0005112)
0.0 0.2 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.9 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629)
0.0 0.2 GO:0044323 retinoic acid-responsive element binding(GO:0044323)
0.0 0.3 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.0 0.2 GO:0005225 volume-sensitive anion channel activity(GO:0005225)
0.0 1.1 GO:0005178 integrin binding(GO:0005178)
0.0 0.4 GO:0005154 epidermal growth factor receptor binding(GO:0005154)
0.0 1.2 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.2 GO:0035804 structural constituent of egg coat(GO:0035804)
0.0 0.4 GO:0031267 small GTPase binding(GO:0031267)
0.0 0.3 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.3 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.0 0.2 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.1 GO:0035173 histone kinase activity(GO:0035173)
0.0 0.3 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.0 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0005025 transforming growth factor beta receptor activity, type I(GO:0005025)
0.0 0.1 GO:0031843 neuropeptide Y receptor binding(GO:0031841) type 2 neuropeptide Y receptor binding(GO:0031843)
0.0 0.3 GO:0050321 tau-protein kinase activity(GO:0050321)
0.0 0.3 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.3 GO:0042162 telomeric DNA binding(GO:0042162)
0.0 0.2 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.2 GO:0035497 cAMP response element binding(GO:0035497)
0.0 0.2 GO:0051721 protein phosphatase 2A binding(GO:0051721)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.1 PID INTEGRIN2 PATHWAY Beta2 integrin cell surface interactions
0.1 1.4 PID INSULIN GLUCOSE PATHWAY Insulin-mediated glucose transport
0.1 0.9 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.0 0.3 PID TCR RAS PATHWAY Ras signaling in the CD4+ TCR pathway
0.0 0.4 PID ERBB NETWORK PATHWAY ErbB receptor signaling network
0.0 1.4 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 1.3 PID P53 REGULATION PATHWAY p53 pathway
0.0 0.2 PID WNT CANONICAL PATHWAY Canonical Wnt signaling pathway
0.0 0.2 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.0 0.3 PID DNA PK PATHWAY DNA-PK pathway in nonhomologous end joining
0.0 0.2 PID MYC PATHWAY C-MYC pathway
0.0 0.4 PID ATR PATHWAY ATR signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.1 0.9 REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.1 0.2 REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0 0.2 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.6 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.3 REACTOME INTEGRATION OF PROVIRUS Genes involved in Integration of provirus
0.0 0.3 REACTOME ARMS MEDIATED ACTIVATION Genes involved in ARMS-mediated activation
0.0 0.9 REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE Genes involved in Synthesis of PIPs at the plasma membrane
0.0 0.4 REACTOME PRE NOTCH PROCESSING IN GOLGI Genes involved in Pre-NOTCH Processing in Golgi
0.0 0.6 REACTOME N GLYCAN ANTENNAE ELONGATION Genes involved in N-Glycan antennae elongation
0.0 0.2 REACTOME TIE2 SIGNALING Genes involved in Tie2 Signaling
0.0 0.1 REACTOME SHC MEDIATED SIGNALLING Genes involved in SHC-mediated signalling
0.0 0.3 REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM Genes involved in Branched-chain amino acid catabolism
0.0 0.2 REACTOME NCAM1 INTERACTIONS Genes involved in NCAM1 interactions
0.0 0.4 REACTOME INTERFERON ALPHA BETA SIGNALING Genes involved in Interferon alpha/beta signaling
0.0 0.7 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.0 0.2 REACTOME TGF BETA RECEPTOR SIGNALING ACTIVATES SMADS Genes involved in TGF-beta receptor signaling activates SMADs
0.0 0.2 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.0 0.9 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis