Project
PRJNA207719: Tissue specific transcriptome profiling
Navigation
Downloads
Results for tfcp2+tfcp2l1+ubp1
Z-value: 1.69
Motif logo
Transcription factors associated with tfcp2+tfcp2l1+ubp1
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| tfcp2l1 | dr11_v1_chr9_+_38292947_38292947 | -0.53 | 3.6e-01 | Click! |
| ubp1 | dr11_v1_chr19_+_42806812_42806814 | -0.17 | 7.9e-01 | Click! |
| tfcp2 | dr11_v1_chr23_-_33679579_33679579 | -0.07 | 9.1e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr16_+_51180938 Show fit | 1.35 |
ENSDART00000169022
|
high mobility group nucleosomal binding domain 2 |
|
| chr10_-_15048781 Show fit | 1.31 |
ENSDART00000038401
ENSDART00000155674 |
si:ch211-95j8.2 |
|
| chr5_+_58665648 Show fit | 1.18 |
ENSDART00000167481
|
zgc:194948 |
|
| chr4_+_76671012 Show fit | 1.15 |
ENSDART00000005585
|
membrane-spanning 4-domains, subfamily A, member 17a.2 |
|
| chr5_+_15203421 Show fit | 1.05 |
ENSDART00000040826
|
T-box 1 |
|
| chr21_+_25688388 Show fit | 1.02 |
ENSDART00000125709
|
bicaudal-D-related protein 2 |
|
| chr25_+_10416583 Show fit | 1.01 |
ENSDART00000073907
|
ets homologous factor |
|
| chr3_-_27647845 Show fit | 0.94 |
ENSDART00000151625
|
si:ch211-157c3.4 |
|
| chr12_-_46145635 Show fit | 0.93 |
ENSDART00000074682
|
zgc:153932 |
|
| chr7_+_73670137 Show fit | 0.86 |
ENSDART00000050357
|
bloodthirsty-related gene family, member 12 |
Network of associatons between targets according to the STRING database.
First level regulatory network of tfcp2+tfcp2l1+ubp1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 3.0 | GO:1990266 | neutrophil migration(GO:1990266) |
| 0.3 | 1.0 | GO:0003156 | regulation of organ formation(GO:0003156) |
| 0.3 | 1.0 | GO:0055107 | Golgi to secretory granule transport(GO:0055107) |
| 0.1 | 0.9 | GO:0006048 | UDP-N-acetylglucosamine biosynthetic process(GO:0006048) |
| 0.0 | 0.8 | GO:0051923 | sulfation(GO:0051923) |
| 0.0 | 0.7 | GO:0046475 | glycerophospholipid catabolic process(GO:0046475) |
| 0.1 | 0.6 | GO:0070285 | pigment cell development(GO:0070285) |
| 0.0 | 0.6 | GO:0032474 | otolith morphogenesis(GO:0032474) |
| 0.0 | 0.6 | GO:0006919 | activation of cysteine-type endopeptidase activity involved in apoptotic process(GO:0006919) |
| 0.2 | 0.5 | GO:0071236 | cellular response to antibiotic(GO:0071236) cellular response to toxic substance(GO:0097237) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 2.1 | GO:0016324 | apical plasma membrane(GO:0016324) |
| 0.1 | 1.1 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
| 0.2 | 0.6 | GO:0061702 | inflammasome complex(GO:0061702) |
| 0.0 | 0.6 | GO:0097038 | perinuclear endoplasmic reticulum(GO:0097038) |
| 0.0 | 0.6 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
| 0.0 | 0.5 | GO:0019773 | proteasome core complex, alpha-subunit complex(GO:0019773) |
| 0.0 | 0.5 | GO:1990246 | uniplex complex(GO:1990246) |
| 0.0 | 0.5 | GO:0031941 | filamentous actin(GO:0031941) |
| 0.0 | 0.4 | GO:0070652 | HAUS complex(GO:0070652) |
| 0.0 | 0.4 | GO:0042555 | MCM complex(GO:0042555) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 3.1 | GO:0031492 | nucleosomal DNA binding(GO:0031492) |
| 0.0 | 2.0 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
| 0.0 | 1.7 | GO:0042803 | protein homodimerization activity(GO:0042803) |
| 0.1 | 1.1 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
| 0.2 | 0.8 | GO:0070548 | L-glutamine aminotransferase activity(GO:0070548) |
| 0.0 | 0.7 | GO:0008028 | monocarboxylic acid transmembrane transporter activity(GO:0008028) |
| 0.0 | 0.6 | GO:0097199 | cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097199) |
| 0.0 | 0.6 | GO:0004708 | MAP kinase kinase activity(GO:0004708) |
| 0.0 | 0.6 | GO:0015248 | sterol transporter activity(GO:0015248) |
| 0.1 | 0.5 | GO:0031826 | type 2A serotonin receptor binding(GO:0031826) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.1 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
| 0.1 | 0.6 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
| 0.0 | 0.6 | PID ATR PATHWAY | ATR signaling pathway |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 1.1 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
| 0.1 | 0.9 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |
| 0.0 | 0.8 | REACTOME ER PHAGOSOME PATHWAY | Genes involved in ER-Phagosome pathway |
| 0.0 | 0.6 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
| 0.0 | 0.5 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |
| 0.0 | 0.4 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
| 0.0 | 0.3 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
| 0.0 | 0.3 | REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the late endosome membrane |
| 0.0 | 0.3 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
| 0.0 | 0.3 | REACTOME ACTIVATION OF NF KAPPAB IN B CELLS | Genes involved in Activation of NF-kappaB in B Cells |