PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
sp1 | dr11_v1_chr11_-_28747_28747 | 0.40 | 5.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_58221163 Show fit | 6.11 |
ENSDART00000157939
|
|
|
chr7_+_568819 Show fit | 4.81 |
ENSDART00000173716
|
neurexin 2b |
|
chr3_-_62380146 Show fit | 4.45 |
ENSDART00000155853
|
G protein-coupled receptor, class C, group 5, member Ba |
|
chr1_+_54677173 Show fit | 4.27 |
ENSDART00000114705
|
G protein-coupled receptor, class C, group 5, member Bb |
|
chr2_+_59015878 Show fit | 3.86 |
ENSDART00000148816
ENSDART00000122795 |
si:ch1073-391i24.1 |
|
chr7_-_6592142 Show fit | 2.67 |
ENSDART00000160137
|
potassium inwardly-rectifying channel, subfamily J, member 10a |
|
chr13_+_1100197 Show fit | 2.65 |
ENSDART00000139560
|
protein phosphatase 3, regulatory subunit B, alpha a |
|
chr11_+_25112269 Show fit | 2.44 |
ENSDART00000147546
|
ndrg family member 3a |
|
chr2_-_22535 Show fit | 2.43 |
ENSDART00000157877
|
|
|
chr19_-_5254699 Show fit | 2.43 |
ENSDART00000081951
|
syntaxin 1B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.9 | GO:0048791 | calcium ion-regulated exocytosis of neurotransmitter(GO:0048791) |
0.1 | 5.6 | GO:1901385 | regulation of voltage-gated calcium channel activity(GO:1901385) |
0.0 | 4.7 | GO:0006470 | protein dephosphorylation(GO:0006470) |
0.0 | 4.5 | GO:0019722 | calcium-mediated signaling(GO:0019722) |
0.6 | 4.2 | GO:0098935 | dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937) anterograde dendritic transport of neurotransmitter receptor complex(GO:0098971) |
0.0 | 4.0 | GO:0006813 | potassium ion transport(GO:0006813) |
0.0 | 4.0 | GO:0007264 | small GTPase mediated signal transduction(GO:0007264) |
0.0 | 3.9 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.2 | 3.8 | GO:0071542 | dopaminergic neuron differentiation(GO:0071542) |
0.1 | 3.8 | GO:0007019 | microtubule depolymerization(GO:0007019) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 18.7 | GO:0043005 | neuron projection(GO:0043005) |
1.5 | 8.7 | GO:0070062 | extracellular exosome(GO:0070062) |
0.1 | 8.0 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.2 | 7.1 | GO:0048788 | cytoskeleton of presynaptic active zone(GO:0048788) |
0.1 | 7.0 | GO:0043025 | neuronal cell body(GO:0043025) |
0.1 | 6.8 | GO:0014069 | postsynaptic density(GO:0014069) |
0.1 | 5.8 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.1 | 5.4 | GO:0005871 | kinesin complex(GO:0005871) |
0.0 | 4.7 | GO:0045202 | synapse(GO:0045202) |
0.4 | 4.1 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) cation-transporting ATPase complex(GO:0090533) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.9 | GO:0030295 | kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295) |
0.0 | 8.0 | GO:0008017 | microtubule binding(GO:0008017) |
0.2 | 7.9 | GO:0044325 | ion channel binding(GO:0044325) |
0.0 | 7.4 | GO:0005085 | guanyl-nucleotide exchange factor activity(GO:0005085) |
0.0 | 7.1 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.1 | 5.3 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.1 | 4.7 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
0.0 | 4.6 | GO:0005516 | calmodulin binding(GO:0005516) |
0.0 | 4.6 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.1 | 4.4 | GO:0008331 | high voltage-gated calcium channel activity(GO:0008331) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.6 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.1 | 3.1 | PID REELIN PATHWAY | Reelin signaling pathway |
0.1 | 3.1 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.1 | 3.1 | PID ERBB2 ERBB3 PATHWAY | ErbB2/ErbB3 signaling events |
0.1 | 2.4 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 2.2 | ST ADRENERGIC | Adrenergic Pathway |
0.2 | 1.9 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 1.9 | PID NOTCH PATHWAY | Notch signaling pathway |
0.1 | 1.8 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.2 | 1.7 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.4 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.2 | 2.8 | REACTOME PLATELET SENSITIZATION BY LDL | Genes involved in Platelet sensitization by LDL |
0.1 | 2.5 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 2.5 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.1 | 2.4 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.0 | 2.2 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 2.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 1.7 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.2 | 1.5 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
0.1 | 1.4 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |