PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
snai3 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000031243	snail family zinc finger 3
snai1b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000046019	snail family zinc finger 1b

Gene	Promoter	Pearson corr. coef.	P-value	Plot
snai1b	dr11_v1_chr23_-_2513300_2513300	0.77	1.3e-01	Click!
snai3	dr11_v1_chr7_+_55112922_55112922	-0.14	8.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr20_-_9436521 Show fit	0.26	ENSDART00000133000	zgc:101840 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:101840
chr6_-_10788065 Show fit	0.26	ENSDART00000190968	wipf1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WAS/WASL interacting protein family, member 1b
chr23_+_32039386 Show fit	0.23	ENSDART00000133801	mylk2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin light chain kinase 2
chr22_+_7439186 Show fit	0.20	ENSDART00000190667	zgc:92041 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:92041
chr13_-_37180815 Show fit	0.18	ENSDART00000139907	si:dkeyp-77c8.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-77c8.1
chr13_+_23157053 Show fit	0.18	ENSDART00000162359	sorbs1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorbin and SH3 domain containing 1
chr5_+_6670945 Show fit	0.18	ENSDART00000185686	pxna Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paxillin a
chr2_+_26237322 Show fit	0.16	ENSDART00000030520	palm1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	paralemmin 1b
chr23_+_34047413 Show fit	0.16	ENSDART00000143933 ENSDART00000123925 ENSDART00000176139	chchd6a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil-helix-coiled-coil-helix domain containing 6a
chr12_+_30586599 Show fit	0.15	ENSDART00000124920 ENSDART00000126984	nrap Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nebulin-related anchoring protein
chr5_-_22052852 Show fit	0.15	ENSDART00000002938	mtmr8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myotubularin related protein 8
chr14_-_38865800 Show fit	0.14	ENSDART00000173047	gsr Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutathione reductase
chr2_-_722156 Show fit	0.14	ENSDART00000045770 ENSDART00000169498	foxq1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	forkhead box Q1a
chr10_-_8358396 Show fit	0.13	ENSDART00000059322	csgalnact1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chondroitin sulfate N-acetylgalactosaminyltransferase 1a
chr24_+_9372292 Show fit	0.13	ENSDART00000082422 ENSDART00000191127 ENSDART00000180510	si:ch211-285f17.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-285f17.1
chr22_-_17677947 Show fit	0.13	ENSDART00000139911	tjp3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tight junction protein 3
chr19_+_40350468 Show fit	0.13	ENSDART00000087444	hepacam2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	HEPACAM family member 2
chr25_+_5012791 Show fit	0.11	ENSDART00000156970	si:ch73-265h17.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-265h17.5
chr20_-_21672970 Show fit	0.11	ENSDART00000133286	si:ch211-207i1.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-207i1.2
chr19_+_142270 Show fit	0.11	ENSDART00000160201	tnfrsf11b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tumor necrosis factor receptor superfamily, member 11b
chr23_-_29824146 Show fit	0.10	ENSDART00000020616	zgc:194189 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:194189
chr10_-_94184 Show fit	0.10	ENSDART00000146125	ttc3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tetratricopeptide repeat domain 3
chr20_-_1314355 Show fit	0.10	ENSDART00000152436	pcmt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein-L-isoaspartate (D-aspartate) O-methyltransferase
chr21_+_19858627 Show fit	0.10	ENSDART00000147010	fybb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FYN binding protein b
chr1_-_44025066 Show fit	0.09	ENSDART00000148932	si:ch73-109d9.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch73-109d9.1
chr21_+_30794351 Show fit	0.09	ENSDART00000139486	zgc:158225 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:158225
chr9_-_28255029 Show fit	0.09	ENSDART00000160387	ccnyl1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin Y-like 1
chr5_-_26181863 Show fit	0.09	ENSDART00000098500	ccdc125 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 125
chr3_+_14641962 Show fit	0.08	ENSDART00000091070	zgc:158403 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:158403
chr2_-_42628028 Show fit	0.08	ENSDART00000179866	myo10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin X
chr25_-_169291 Show fit	0.08	ENSDART00000128344	lipcb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lipase, hepatic b
chr20_+_190028 Show fit	0.08	ENSDART00000189117 ENSDART00000130003	cx28.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 28.8
chr4_-_12790886 Show fit	0.07	ENSDART00000182535 ENSDART00000067131 ENSDART00000186426	irak3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	interleukin-1 receptor-associated kinase 3
chr13_-_36579086 Show fit	0.07	ENSDART00000146671	lgals3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lectin, galactoside binding soluble 3a
chr24_+_36018164 Show fit	0.07	ENSDART00000182815 ENSDART00000126941	gnal2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 2
chr10_-_33588106 Show fit	0.07	ENSDART00000155634	eva1c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eva-1 homolog C (C. elegans)
chr10_+_1052591 Show fit	0.07	ENSDART00000123405	unc5c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	unc-5 netrin receptor C
chr7_+_42328578 Show fit	0.07	ENSDART00000149082	phkb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphorylase kinase, beta
chr1_+_524717 Show fit	0.07	ENSDART00000102421 ENSDART00000184473	mrpl16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial ribosomal protein L16
chr8_+_20140321 Show fit	0.06	ENSDART00000012120	acsbg2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acyl-CoA synthetase bubblegum family member 2
chr12_-_46112892 Show fit	0.06	ENSDART00000187128 ENSDART00000114268	zgc:153932 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153932
chr4_-_78026285 Show fit	0.06	ENSDART00000168273	CCT2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chaperonin containing TCP1 subunit 2
chr15_-_434503 Show fit	0.06	ENSDART00000122286	CABZ01056629.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_-_52902693 Show fit	0.06	ENSDART00000166115 ENSDART00000161050	ctsbb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cathepsin Bb
chr14_+_34514336 Show fit	0.05	ENSDART00000024440	foxi3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	forkhead box I3b
chr17_+_1360192 Show fit	0.05	ENSDART00000184561	siva1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SIVA1, apoptosis-inducing factor
chr25_-_16076257 Show fit	0.05	ENSDART00000140780	ovch2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ovochymase 2
chr25_+_5249513 Show fit	0.05	ENSDART00000126814	CABZ01039863.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr6_+_39905021 Show fit	0.04	ENSDART00000064904	endou Links NCBI UniProt ZFIN ENSEMBL Google Show fit	endonuclease, polyU-specific
chr15_+_1397811 Show fit	0.04	ENSDART00000102125	schip1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	schwannomin interacting protein 1
chr12_-_11294979 Show fit	0.04	ENSDART00000148850	get4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	golgi to ER traffic protein 4 homolog (S. cerevisiae)
chr7_-_45990681 Show fit	0.04	ENSDART00000165441	si:ch211-260e23.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-260e23.7
chr19_-_35439237 Show fit	0.04	ENSDART00000145883	anln Links NCBI UniProt ZFIN ENSEMBL Google Show fit	anillin, actin binding protein
chr7_+_30988570 Show fit	0.04	ENSDART00000180613 ENSDART00000185625	tjp1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tight junction protein 1a
chr18_+_33580391 Show fit	0.04	ENSDART00000189300	si:dkey-47k20.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-47k20.4
chr22_+_20560041 Show fit	0.04	ENSDART00000135490	nfil3-4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	nuclear factor, interleukin 3 regulated, member 4
chr8_-_34762163 Show fit	0.03	ENSDART00000114080	setd1bb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SET domain containing 1B, b
chr22_-_26251563 Show fit	0.03	ENSDART00000060888 ENSDART00000142821	ccdc130 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 130
chr7_-_58867188 Show fit	0.03	ENSDART00000187006	CU681855.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr25_+_27744293 Show fit	0.03	ENSDART00000103519 ENSDART00000149456	wasla Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Wiskott-Aldrich syndrome-like a
chr18_-_17531483 Show fit	0.03	ENSDART00000061000	bbs2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Bardet-Biedl syndrome 2
chr6_-_10728921 Show fit	0.03	ENSDART00000151484	sp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Sp3b transcription factor
chr2_-_49997055 Show fit	0.03	ENSDART00000140294	si:ch211-106n13.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-106n13.3
chr14_-_26482096 Show fit	0.02	ENSDART00000187280	smad5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SMAD family member 5
chr8_+_247163 Show fit	0.02	ENSDART00000122378	cep120 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 120
chr9_+_331425 Show fit	0.02	ENSDART00000170312	actr5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ARP5 actin related protein 5 homolog
chr17_+_50655619 Show fit	0.02	ENSDART00000184917 ENSDART00000167638	ddhd1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DDHD domain containing 1a
chr9_-_11549379 Show fit	0.02	ENSDART00000187074	fev Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FEV (ETS oncogene family)
chr22_-_8910567 Show fit	0.02	ENSDART00000187896 ENSDART00000188511 ENSDART00000175764	FO393424.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr13_-_9119867 Show fit	0.02	ENSDART00000137255	si:dkey-112g5.15 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-112g5.15
chr6_-_130849 Show fit	0.02	ENSDART00000108710	LRRC8E Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:zfos-323e3.4
chr7_-_50367642 Show fit	0.02	ENSDART00000134941	prc1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein regulator of cytokinesis 1b
chr13_+_35955562 Show fit	0.02	ENSDART00000137377	si:ch211-67f13.7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-67f13.7
chr2_-_10896745 Show fit	0.02	ENSDART00000114609	cdcp2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CUB domain containing protein 2
chr23_-_24047054 Show fit	0.01	ENSDART00000184308 ENSDART00000185902	CR925720.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr12_-_2869565 Show fit	0.01	ENSDART00000152772	zdhhc16b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger, DHHC-type containing 16b
chr3_-_34052882 Show fit	0.01	ENSDART00000151463	ighv11-1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	immunoglobulin heavy variable 11-1
chr6_-_10728057 Show fit	0.01	ENSDART00000002247	sp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Sp3b transcription factor
chr14_-_15155384 Show fit	0.01	ENSDART00000172666	uvssa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UV-stimulated scaffold protein A
chr24_-_25184553 Show fit	0.01	ENSDART00000166917	plcxd2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphatidylinositol-specific phospholipase C, X domain containing 2
chr17_-_11151655 Show fit	0.01	ENSDART00000156383	CU179699.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr11_-_8782871 Show fit	0.01	ENSDART00000158546	si:ch211-51h4.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-51h4.2
chr17_+_45639247 Show fit	0.01	ENSDART00000153669	vcpkmt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	valosin containing protein lysine (K) methyltransferase
chr7_-_50367326 Show fit	0.01	ENSDART00000141926	prc1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein regulator of cytokinesis 1b
chr5_+_53482597 Show fit	0.01	ENSDART00000180333	BX323994.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr7_-_30926030 Show fit	0.01	ENSDART00000075421	sord Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorbitol dehydrogenase
chr3_+_24190207 Show fit	0.00	ENSDART00000034762	prr15la Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proline rich 15-like a
chr7_+_20917966 Show fit	0.00	ENSDART00000129161	wrap53 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WD repeat containing, antisense to TP53
chr4_-_36476889 Show fit	0.00	ENSDART00000163956	si:ch211-263l8.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-263l8.1
chr22_+_22438783 Show fit	0.00	ENSDART00000147825	kif14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinesin family member 14
chr22_-_18546649 Show fit	0.00	ENSDART00000171277	cirbpb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cold inducible RNA binding protein b

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0071691	cardiac muscle thin filament assembly(GO:0071691)
0.0	0.1	GO:0032640	tumor necrosis factor production(GO:0032640) tumor necrosis factor superfamily cytokine production(GO:0071706)
0.0	0.1	GO:1904031	positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.0	0.1	GO:0030104	water homeostasis(GO:0030104)
0.0	0.1	GO:0048245	eosinophil chemotaxis(GO:0048245) eosinophil migration(GO:0072677)
0.0	0.1	GO:0007191	adenylate cyclase-activating dopamine receptor signaling pathway(GO:0007191)
0.0	0.1	GO:0009957	epidermal cell fate specification(GO:0009957)
0.0	0.2	GO:0042407	cristae formation(GO:0042407)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0061617	MICOS complex(GO:0061617)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004362	glutathione-disulfide reductase activity(GO:0004362)
0.0	0.1	GO:0034185	apolipoprotein binding(GO:0034185)
0.0	0.2	GO:0004687	myosin light chain kinase activity(GO:0004687)
0.0	0.1	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719)
0.0	0.1	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238)
0.0	0.1	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0	0.1	GO:0019865	IgE binding(GO:0019863) immunoglobulin binding(GO:0019865)