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PRJNA207719: Tissue specific transcriptome profiling

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Results for rcor1+rcor2+rcor3

Z-value: 0.69

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Transcription factors associated with rcor1+rcor2+rcor3

Gene Symbol Gene ID Gene Info
ENSDARG00000004502 REST corepressor 3
ENSDARG00000008278 REST corepressor 2
ENSDARG00000031434 REST corepressor 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rcor2dr11_v1_chr7_-_24994722_249947220.977.7e-03Click!
rcor3dr11_v1_chr22_+_38276024_382760240.961.0e-02Click!
rcor1dr11_v1_chr17_-_29271359_292713590.523.7e-01Click!

Activity profile of rcor1+rcor2+rcor3 motif

Sorted Z-values of rcor1+rcor2+rcor3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr2_-_22535 2.02 ENSDART00000157877

chr11_-_44543082 0.88 ENSDART00000099568
G protein-coupled receptor 137Bb
chr16_-_27640995 0.81 ENSDART00000019658
NAC alpha domain containing
chr16_-_17207754 0.55 ENSDART00000063804
wu:fj39g12
chr4_+_21206283 0.55 ENSDART00000041861
synaptotagmin Ia
chr15_-_12113045 0.53 ENSDART00000159879
Down syndrome cell adhesion molecule like 1
chr17_-_22048233 0.51 ENSDART00000155203
tau tubulin kinase 1b
chr6_+_58543336 0.49 ENSDART00000157018
stathmin-like 3
chr19_-_27966780 0.49 ENSDART00000110016
ubiquitin-conjugating enzyme E2Q family-like 1
chr6_-_58828113 0.49 ENSDART00000180934
kinesin family member 5A, b
chr11_-_44030962 0.48 ENSDART00000171910

chr2_-_44282796 0.47 ENSDART00000163040
ENSDART00000166923
ENSDART00000056372
ENSDART00000109251
ENSDART00000132682
myelin protein zero
chr24_+_32411753 0.46 ENSDART00000058530
neuronal differentiation 6a
chr20_+_66857 0.45 ENSDART00000114999
leucine rich repeat and fibronectin type III domain containing 2b
chr11_+_14676236 0.45 ENSDART00000109308
si:ch73-60h1.1
chr23_+_44732863 0.45 ENSDART00000160044
ENSDART00000172268
ATPase Na+/K+ transporting subunit beta 2a
chr8_+_16004154 0.42 ENSDART00000134787
ENSDART00000172510
ENSDART00000141173
ELAV like neuron-specific RNA binding protein 4
chr7_+_58686860 0.41 ENSDART00000052332
proenkephalin b
chr25_+_21324588 0.40 ENSDART00000151842
leucine rich repeat neuronal 3a
chr19_-_27196090 0.38 ENSDART00000045616
gamma-aminobutyric acid (GABA) B receptor, 1b
chr1_-_39943596 0.38 ENSDART00000149730
storkhead box 2a
chr7_+_528593 0.38 ENSDART00000091955
neurexin 2b
chr6_-_52156427 0.37 ENSDART00000082821
regulating synaptic membrane exocytosis 4
chr21_+_25643880 0.37 ENSDART00000192392
ENSDART00000145091
transmembrane protein 151A
chr14_-_1949277 0.37 ENSDART00000159435
protocadherin 2 gamma 5
chr8_+_24861264 0.37 ENSDART00000099607
solute carrier family 6 (neutral amino acid transporter), member 17
chr8_+_28065803 0.36 ENSDART00000178481
potassium voltage-gated channel, Shal-related subfamily, member 3
chr6_-_58828398 0.35 ENSDART00000090634
kinesin family member 5A, b
chr13_+_1100197 0.35 ENSDART00000139560
protein phosphatase 3, regulatory subunit B, alpha a
chr11_-_25734417 0.35 ENSDART00000103570
bromodomain and PHD finger containing, 3a
chr23_-_14990865 0.34 ENSDART00000147799
ndrg family member 3b
chr16_-_12914288 0.34 ENSDART00000184221
calcium channel, voltage-dependent, gamma subunit 8b
chr25_+_2993855 0.33 ENSDART00000163009
neogenin 1b
chr11_-_32723851 0.33 ENSDART00000155592
protocadherin 17
chr21_-_26918901 0.33 ENSDART00000100685
leucine rich repeat and fibronectin type III domain containing 4a
chr19_+_6938289 0.32 ENSDART00000139122
ENSDART00000178832
flotillin 1b
chr6_-_60031693 0.32 ENSDART00000160275

chr3_-_56933578 0.32 ENSDART00000192185
HID1 domain containing a
chr3_+_22578369 0.32 ENSDART00000187695
ENSDART00000182678
ENSDART00000112270
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2a
chr22_+_110158 0.31 ENSDART00000143698
protein kinase, cAMP-dependent, regulatory, type II, alpha, B
chr22_+_10215558 0.31 ENSDART00000063274
potassium channel tetramerization domain containing 6a
chr16_-_25285469 0.31 ENSDART00000183943
ENSDART00000191103
ENSDART00000154543
PRELI domain containing 3A
chr5_+_22098591 0.30 ENSDART00000143676
zinc finger CCCH-type containing 12B
chr10_-_35542071 0.30 ENSDART00000162139
si:ch211-244c8.4
chr6_+_41255485 0.30 ENSDART00000042683
ENSDART00000186013
Ca2+-dependent activator protein for secretion b
chr16_+_13822137 0.29 ENSDART00000163251
folliculin
chr6_-_13408680 0.29 ENSDART00000151566
formin-like 2b
chr22_-_38508112 0.29 ENSDART00000192004
kinesin light chain 4
chr22_+_12366516 0.28 ENSDART00000157802
R3H domain containing 1
chr19_+_41769135 0.28 ENSDART00000087096
tubulointerstitial nephritis antigen-like 1
chr3_+_33340939 0.28 ENSDART00000128786
peptide YYa
chr5_-_32445835 0.27 ENSDART00000170919
neuronal calcium sensor 1a
chr11_+_11271959 0.27 ENSDART00000190678
protein tyrosine phosphatase type IVA, member 1
chr8_+_29749017 0.27 ENSDART00000185144
mitogen-activated protein kinase 4
chr8_+_21629941 0.27 ENSDART00000140145
adherens junctions associated protein 1
chr10_+_34377697 0.27 ENSDART00000189441
StAR-related lipid transfer (START) domain containing 13a
chr5_+_32009956 0.26 ENSDART00000188482
suppressor of cancer cell invasion
chr12_+_32159272 0.26 ENSDART00000153167
hepatic leukemia factor b
chr9_+_2393764 0.26 ENSDART00000172624
chimerin 1
chr6_+_22597362 0.26 ENSDART00000131242
cytoglobin 2
chr8_+_25267903 0.25 ENSDART00000093090
adenosine monophosphate deaminase 2b
chr24_-_41320037 0.25 ENSDART00000129058
Ras homolog, mTORC1 binding
chr22_-_12160283 0.25 ENSDART00000146785
ENSDART00000128176
transmembrane protein 163b
chr8_+_26868105 0.25 ENSDART00000005337
ribosomal modification protein rimK-like family member A
chr9_-_23824290 0.24 ENSDART00000059209
WD repeat and FYVE domain containing 2
chr24_-_26518972 0.24 ENSDART00000097792
TRAF2 and NCK interacting kinase b
chr9_-_27649406 0.24 ENSDART00000181270
ENSDART00000187112
syntaxin binding protein 5-like
chr19_+_9050852 0.24 ENSDART00000151031
ash1 (absent, small, or homeotic)-like (Drosophila)
chr2_+_50094873 0.23 ENSDART00000132307
zinc finger, CCHC domain containing 2
chr10_-_1718395 0.23 ENSDART00000137620
si:ch73-46j18.5
chr16_-_24518027 0.23 ENSDART00000134120
ENSDART00000143761
cell adhesion molecule 4
chr21_+_43561650 0.23 ENSDART00000085071
G protein-coupled receptor 185 a
chr14_-_1990290 0.22 ENSDART00000183382
protocadherin 2 gamma 5
chr14_-_2369849 0.22 ENSDART00000180422
ENSDART00000189731
ENSDART00000111748
protocadherin b
chr20_+_13969414 0.22 ENSDART00000049864
retinal degeneration 3
chr19_+_14059349 0.22 ENSDART00000166230
trophoblast glycoprotein a
chr12_+_32729470 0.22 ENSDART00000175712
RNA binding fox-1 homolog 3a
chr21_-_14966718 0.21 ENSDART00000151200
matrix metallopeptidase 17a
chr6_-_21873266 0.21 ENSDART00000151658
ENSDART00000151152
ENSDART00000151179
si:dkey-19e4.5
chr9_+_21535885 0.21 ENSDART00000141408
Rho guanine nucleotide exchange factor (GEF) 7a
chr19_+_9533008 0.21 ENSDART00000104607
family with sequence similarity 131, member Ba
chr11_+_36231248 0.21 ENSDART00000131104
si:ch211-213o11.11
chr7_+_21752168 0.21 ENSDART00000173641
lysine (K)-specific demethylase 6B, a
chr7_+_39624728 0.21 ENSDART00000173847
ENSDART00000173845
protein tyrosine phosphatase, non-receptor type 5
chr4_+_9394426 0.21 ENSDART00000092013
transmembrane and tetratricopeptide repeat containing 1
chr20_-_1560724 0.21 ENSDART00000179193
ENSDART00000092508
ENSDART00000133369
protein tyrosine phosphatase, receptor type, K
chr1_-_7894255 0.20 ENSDART00000167126
ENSDART00000145460
Ras association and DIL domains
chr14_-_572742 0.20 ENSDART00000168951
fibroblast growth factor 2
chr17_-_38887424 0.20 ENSDART00000141177
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a
chr7_-_38477235 0.20 ENSDART00000084355
zgc:165481
chr5_-_31772559 0.20 ENSDART00000183879
family with sequence similarity 102, member Ab
chr2_+_45374163 0.20 ENSDART00000193650
calmodulin regulated spectrin-associated protein family, member 2b
chr12_+_35203091 0.20 ENSDART00000153022
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b
chr23_-_6722101 0.20 ENSDART00000157828
bromodomain adjacent to zinc finger domain, 2A
chr6_+_59991076 0.20 ENSDART00000163575

chr2_+_59015878 0.20 ENSDART00000148816
ENSDART00000122795
si:ch1073-391i24.1
chr16_+_17389116 0.19 ENSDART00000103750
ENSDART00000173448
family with sequence similarity 131, member Bb
chr19_-_27776649 0.19 ENSDART00000135348
adenylate cyclase 2b (brain)
chr15_+_47418565 0.19 ENSDART00000155709
ClpB homolog, mitochondrial AAA ATPase chaperonin
chr19_-_2029777 0.19 ENSDART00000128639

chr16_-_28658341 0.19 ENSDART00000148456
ATP-binding cassette, sub-family B (MDR/TAP), member 4
chr20_-_53321499 0.19 ENSDART00000179894
ENSDART00000127427
ENSDART00000084952
WAS protein family, member 1
chr21_+_44581654 0.19 ENSDART00000187201
ENSDART00000180360
ENSDART00000191543
ENSDART00000180039
ENSDART00000186308
transmembrane protein 164
chr16_-_34258931 0.18 ENSDART00000145485
phosphatase and actin regulator 4b
chr12_+_31494830 0.18 ENSDART00000153390
glycerol-3-phosphate acyltransferase, mitochondrial
chr10_+_21722892 0.18 ENSDART00000162855
protocadherin 1 gamma 13
chr7_+_36898622 0.18 ENSDART00000190773
TOX high mobility group box family member 3
chr7_+_56735195 0.18 ENSDART00000082830
KIAA0895 like
chr2_+_24867534 0.18 ENSDART00000158050
RAB3A, member RAS oncogene family, a
chr4_-_2868112 0.18 ENSDART00000133843
phosphodiesterase 3A, cGMP-inhibited
chr11_+_45299447 0.18 ENSDART00000172999
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Gb
chr22_+_24157807 0.18 ENSDART00000159165
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
chr10_-_7347311 0.18 ENSDART00000168885
neuregulin 1
chr23_-_9965148 0.17 ENSDART00000137308
plexin b1a
chr2_-_11258547 0.17 ENSDART00000165803
ENSDART00000193817
solute carrier family 44, member 5a
chr15_-_11956981 0.17 ENSDART00000164163
si:dkey-202l22.3
chr19_+_17400283 0.17 ENSDART00000127353
nuclear receptor subfamily 1, group D, member 2b
chr7_+_31051213 0.17 ENSDART00000148347
tight junction protein 1a
chr23_+_2825940 0.17 ENSDART00000135781
phospholipase C, gamma 1
chr17_+_43629008 0.17 ENSDART00000184185
ENSDART00000181681
zinc finger protein 365
chr6_-_7726849 0.17 ENSDART00000151511
solute carrier family 25, member 38b
chr19_+_30867845 0.17 ENSDART00000047461
major facilitator superfamily domain containing 2ab
chr16_-_19890303 0.17 ENSDART00000147161
ENSDART00000079159
histone deacetylase 9b
chr4_-_9728730 0.16 ENSDART00000150265
microtubule associated monooxygenase, calponin and LIM domain containing 3b
chr3_+_37827373 0.16 ENSDART00000039517
acid-sensing (proton-gated) ion channel 2
chr17_+_41992054 0.16 ENSDART00000182878
ENSDART00000111537
kizuna centrosomal protein
chr12_+_44610912 0.15 ENSDART00000179030
ENSDART00000178008
family with sequence similarity 196 member A
chr1_-_7893808 0.15 ENSDART00000110154
Ras association and DIL domains
chr20_-_2355357 0.15 ENSDART00000085281
si:ch73-18b11.1
chr12_+_18971100 0.15 ENSDART00000164212
l(3)mbt-like 2 (Drosophila)
chr14_+_29550323 0.15 ENSDART00000157943
si:dkey-34l15.2
chr23_-_18017946 0.15 ENSDART00000104592
peptidase M20 domain containing 1, tandem duplicate 2
chr3_+_9379877 0.15 ENSDART00000182080

chr25_-_32449235 0.15 ENSDART00000115343
ATPase phospholipid transporting 8B4
chr14_-_2217285 0.15 ENSDART00000157949
ENSDART00000166150
ENSDART00000054891
ENSDART00000183268
protocadherin 2 alpha b2
protocadherin 2 alpha b2
chr10_-_5847904 0.14 ENSDART00000161096
ankyrin repeat domain 55
chr14_+_34547554 0.14 ENSDART00000074819
gamma-aminobutyric acid (GABA) A receptor, pi
chr12_+_13348918 0.14 ENSDART00000181373
ribonuclease type III, nuclear
chr14_+_24283915 0.14 ENSDART00000172868
kelch-like family member 3
chr2_+_11685742 0.14 ENSDART00000138562
growth regulation by estrogen in breast cancer-like
chr10_-_35236949 0.14 ENSDART00000145804
yippee-like 2a
chr7_-_33829824 0.14 ENSDART00000074729
uveal autoantigen with coiled-coil domains and ankyrin repeats b
chr19_+_7559901 0.14 ENSDART00000141189
pre-B-cell leukemia homeobox interacting protein 1a
chr3_+_60957512 0.14 ENSDART00000044096
helicase with zinc finger
chr6_-_42418225 0.14 ENSDART00000002501
inositol hexakisphosphate kinase 2a
chr1_+_52929185 0.14 ENSDART00000147683
inositol polyphosphate-4-phosphatase type II B
chr14_-_2004291 0.14 ENSDART00000114039
protocadherin 2 gamma 5
chr20_+_54333774 0.14 ENSDART00000144633
CLOCK-interacting pacemaker b
chr17_+_28624321 0.13 ENSDART00000122260
HEAT repeat containing 5a
chr4_-_2014406 0.13 ENSDART00000180463
si:dkey-97m3.1
chr8_-_13177536 0.13 ENSDART00000100992
zgc:194990
chr12_+_14149686 0.13 ENSDART00000123741
kelch repeat and BTB (POZ) domain containing 2
chr13_+_31070181 0.13 ENSDART00000110560
ENSDART00000146088
si:ch211-223a10.1
chr4_+_12612145 0.13 ENSDART00000181201
LIM domain only 3
chr23_+_2760573 0.13 ENSDART00000129719
DNA topoisomerase I
chr19_+_49721 0.13 ENSDART00000160489
collagen, type XIV, alpha 1b
chr6_+_23809163 0.13 ENSDART00000170402
glutamate-ammonia ligase (glutamine synthase) b
chr10_-_641609 0.13 ENSDART00000041236
regulatory factor X, 3 (influences HLA class II expression)
chr22_-_11724563 0.12 ENSDART00000190796
ENSDART00000184744
keratin 222
chr6_-_1820606 0.12 ENSDART00000183228

chr23_-_45504991 0.12 ENSDART00000148761
collagen type XXIV alpha 1
chr17_-_23412705 0.12 ENSDART00000126995
si:ch211-149k12.3
chr3_-_23596532 0.12 ENSDART00000124921
ubiquitin-conjugating enzyme E2Z
chr9_-_10532591 0.12 ENSDART00000175269
thrombospondin, type I, domain containing 7Ba
chr14_-_2196267 0.12 ENSDART00000161674
ENSDART00000125674
protocadherin 2 alpha b 8
protocadherin 2 alpha b 9
chr10_-_26179805 0.12 ENSDART00000174797
tripartite motif containing 3b
chr24_-_5910811 0.12 ENSDART00000163012
procollagen C-endopeptidase enhancer 2b
chr15_-_33640890 0.12 ENSDART00000167705
StAR-related lipid transfer (START) domain containing 13b
chr15_-_33807758 0.12 ENSDART00000158445
PDS5 cohesin associated factor B
chr23_+_22335407 0.12 ENSDART00000147696
RAP1 GTPase activating protein
chr18_-_44611252 0.12 ENSDART00000173095
sprouty-related, EVH1 domain containing 3
chr13_-_18119696 0.12 ENSDART00000148125
WASH complex subunit 2C
chr2_-_39759059 0.12 ENSDART00000007333
solute carrier family 25 (pyrimidine nucleotide carrier ), member 36a
chr11_-_19694334 0.12 ENSDART00000054735
si:dkey-30j16.3
chr5_+_51102010 0.12 ENSDART00000110377
zgc:194398
chr21_-_3201027 0.12 ENSDART00000161256
zinc finger and BTB domain containing 7C
chr6_+_3516695 0.11 ENSDART00000109576
fatty acid amide hydrolase
chr7_+_60111581 0.11 ENSDART00000087093
heat shock protein 12B
chr7_-_35379899 0.11 ENSDART00000183484
solute carrier family 6 (neurotransmitter transporter), member 2
chr2_-_7185460 0.11 ENSDART00000092078
ring finger and CCCH-type domains 1b
chr25_+_20116407 0.11 ENSDART00000183615
ENSDART00000193243
2,3-bisphosphoglycerate mutase
chr20_-_26588736 0.11 ENSDART00000134337
exocyst complex component 2
chr12_-_7806007 0.11 ENSDART00000190359
ankyrin 3b
chr3_-_23596809 0.11 ENSDART00000156897
ubiquitin-conjugating enzyme E2Z
chr24_-_26715174 0.11 ENSDART00000079726
phospholipase D1b
chr10_+_40214877 0.10 ENSDART00000109689
GRAM domain containing 1Ba
chr4_-_23839789 0.10 ENSDART00000143571
USP6 N-terminal like
chr13_-_4367083 0.10 ENSDART00000124716
si:dkeyp-121d4.3
chr18_+_17754510 0.10 ENSDART00000189372
ENSDART00000135236
ENSDART00000137239
si:ch211-216l23.2
chr14_+_52408619 0.10 ENSDART00000163856
nitric oxide associated 1
chr22_-_876506 0.10 ENSDART00000137522
choline/ethanolamine phosphotransferase 1b
chr6_-_13709591 0.10 ENSDART00000151771
chondroitin polymerizing factor b
chr1_+_19535144 0.10 ENSDART00000103089
si:dkey-245p14.4
chr12_+_47907277 0.10 ENSDART00000097714
thymus, brain and testes associated
chr15_+_31806303 0.10 ENSDART00000155902
furry homolog a (Drosophila)
chr15_-_43768776 0.10 ENSDART00000170398
glutamate receptor, metabotropic 5b
chr1_-_45584407 0.10 ENSDART00000149155
activating transcription factor 7 interacting protein
chr23_+_43770149 0.10 ENSDART00000024313
ring finger protein 150b
chr17_-_25630822 0.09 ENSDART00000126201
ENSDART00000105503
ENSDART00000151878
RAB3 GTPase activating protein subunit 2 (non-catalytic)
chr3_+_15776446 0.09 ENSDART00000146651
zinc finger protein 652

Network of associatons between targets according to the STRING database.

First level regulatory network of rcor1+rcor2+rcor3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0045671 negative regulation of osteoclast differentiation(GO:0045671)
0.1 0.4 GO:0015824 proline transport(GO:0015824)
0.1 0.4 GO:0071435 potassium ion export(GO:0071435) potassium ion export across plasma membrane(GO:0097623)
0.1 0.8 GO:0098971 dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937) anterograde dendritic transport of neurotransmitter receptor complex(GO:0098971)
0.1 0.3 GO:1901890 positive regulation of cell junction assembly(GO:1901890)
0.1 0.4 GO:0035095 behavioral response to nicotine(GO:0035095)
0.1 0.2 GO:0035477 regulation of angioblast cell migration involved in selective angioblast sprouting(GO:0035477)
0.1 0.3 GO:0021557 oculomotor nerve development(GO:0021557)
0.1 0.2 GO:0031630 regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031630)
0.1 0.2 GO:0007171 activation of transmembrane receptor protein tyrosine kinase activity(GO:0007171) Schwann cell migration(GO:0036135) cardiac neuron differentiation(GO:0060945) cardiac neuron development(GO:0060959)
0.1 0.2 GO:1904983 transmembrane glycine transport from cytosol to mitochondrion(GO:1904983)
0.0 0.1 GO:0072156 distal tubule morphogenesis(GO:0072156)
0.0 0.1 GO:1901223 negative regulation of NIK/NF-kappaB signaling(GO:1901223)
0.0 0.9 GO:0048791 calcium ion-regulated exocytosis of neurotransmitter(GO:0048791)
0.0 0.3 GO:1903846 positive regulation of transforming growth factor beta receptor signaling pathway(GO:0030511) positive regulation of cellular response to transforming growth factor beta stimulus(GO:1903846)
0.0 0.1 GO:1990519 pyrimidine nucleotide transport(GO:0006864) mitochondrial pyrimidine nucleotide import(GO:1990519)
0.0 0.2 GO:0003232 bulbus arteriosus development(GO:0003232)
0.0 0.1 GO:2000275 regulation of oxidative phosphorylation uncoupler activity(GO:2000275)
0.0 0.1 GO:0015874 norepinephrine transport(GO:0015874)
0.0 0.2 GO:0045056 transcytosis(GO:0045056)
0.0 0.1 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.0 0.1 GO:0099553 trans-synaptic signaling by lipid, modulating synaptic transmission(GO:0099552) trans-synaptic signaling by endocannabinoid, modulating synaptic transmission(GO:0099553)
0.0 0.1 GO:0060829 negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060829)
0.0 0.2 GO:0060282 positive regulation of oocyte development(GO:0060282)
0.0 0.2 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.1 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.0 0.4 GO:0044154 histone H3-K14 acetylation(GO:0044154)
0.0 0.1 GO:0032534 regulation of microvillus organization(GO:0032530) regulation of microvillus assembly(GO:0032534)
0.0 0.2 GO:2001045 negative regulation of integrin-mediated signaling pathway(GO:2001045)
0.0 0.1 GO:2000815 regulation of mRNA stability involved in response to stress(GO:0010610) regulation of mRNA stability involved in response to oxidative stress(GO:2000815)
0.0 0.2 GO:0045604 regulation of epidermal cell differentiation(GO:0045604)
0.0 0.4 GO:0071436 cellular potassium ion homeostasis(GO:0030007) sodium ion export from cell(GO:0036376) sodium ion export(GO:0071436)
0.0 0.3 GO:1990504 dense core granule exocytosis(GO:1990504)
0.0 0.5 GO:0007168 receptor guanylyl cyclase signaling pathway(GO:0007168)
0.0 0.1 GO:1902373 negative regulation of mRNA catabolic process(GO:1902373) regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623)
0.0 0.2 GO:0071557 histone H3-K27 demethylation(GO:0071557)
0.0 0.1 GO:0038065 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) collagen-activated signaling pathway(GO:0038065)
0.0 0.2 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.1 GO:2001106 regulation of guanyl-nucleotide exchange factor activity(GO:1905097) regulation of Rho guanyl-nucleotide exchange factor activity(GO:2001106)
0.0 0.3 GO:0098943 neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943)
0.0 0.1 GO:0010801 regulation of peptidyl-threonine phosphorylation(GO:0010799) negative regulation of peptidyl-threonine phosphorylation(GO:0010801)
0.0 0.3 GO:0010738 regulation of protein kinase A signaling(GO:0010738)
0.0 0.1 GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence(GO:0045050)
0.0 0.1 GO:0038093 Fc receptor signaling pathway(GO:0038093)
0.0 0.5 GO:0070593 dendrite self-avoidance(GO:0070593)
0.0 0.2 GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0015014)
0.0 0.2 GO:0007026 negative regulation of microtubule depolymerization(GO:0007026) negative regulation of microtubule polymerization or depolymerization(GO:0031111)
0.0 0.1 GO:0071387 cellular response to cortisol stimulus(GO:0071387) response to dexamethasone(GO:0071548)
0.0 0.2 GO:0036058 filtration diaphragm assembly(GO:0036058) slit diaphragm assembly(GO:0036060)
0.0 0.2 GO:0051127 positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.5 GO:0007019 microtubule depolymerization(GO:0007019)
0.0 0.1 GO:0055016 hypochord development(GO:0055016)
0.0 0.3 GO:0015671 oxygen transport(GO:0015671)
0.0 0.3 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 0.2 GO:0030324 respiratory tube development(GO:0030323) lung development(GO:0030324)
0.0 0.1 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.2 GO:0030309 poly-N-acetyllactosamine metabolic process(GO:0030309) poly-N-acetyllactosamine biosynthetic process(GO:0030311)
0.0 0.0 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.0 0.4 GO:0050708 regulation of protein secretion(GO:0050708)
0.0 0.1 GO:2000096 positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096)
0.0 0.3 GO:0030513 positive regulation of BMP signaling pathway(GO:0030513)
0.0 0.3 GO:0003323 type B pancreatic cell development(GO:0003323)
0.0 0.0 GO:0046166 methylglyoxal biosynthetic process(GO:0019242) glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.5 GO:0042584 chromaffin granule membrane(GO:0042584)
0.1 0.3 GO:0016600 flotillin complex(GO:0016600)
0.1 0.3 GO:0044214 spanning component of plasma membrane(GO:0044214) spanning component of membrane(GO:0089717)
0.1 0.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.4 GO:0097648 G-protein coupled receptor dimeric complex(GO:0038037) G-protein coupled receptor heterodimeric complex(GO:0038039) G-protein coupled receptor complex(GO:0097648)
0.0 0.4 GO:0090533 sodium:potassium-exchanging ATPase complex(GO:0005890) cation-transporting ATPase complex(GO:0090533)
0.0 0.1 GO:0005592 collagen type XI trimer(GO:0005592)
0.0 0.3 GO:0005952 cAMP-dependent protein kinase complex(GO:0005952)
0.0 0.2 GO:0016586 RSC complex(GO:0016586)
0.0 0.5 GO:0043209 myelin sheath(GO:0043209)
0.0 0.1 GO:0070209 ASTRA complex(GO:0070209)
0.0 0.4 GO:0070776 H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.0 0.2 GO:0036449 microtubule minus-end(GO:0036449)
0.0 0.2 GO:0030285 integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563)
0.0 0.1 GO:0033553 rDNA heterochromatin(GO:0033553)
0.0 0.4 GO:0048788 cytoskeleton of presynaptic active zone(GO:0048788)
0.0 0.1 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.2 GO:0031209 SCAR complex(GO:0031209)
0.0 0.9 GO:0005871 kinesin complex(GO:0005871)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0072591 N-acetyl-L-aspartate-L-glutamate ligase activity(GO:0072590) citrate-L-glutamate ligase activity(GO:0072591)
0.1 0.2 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462) efflux transmembrane transporter activity(GO:0015562)
0.1 0.4 GO:0005250 A-type (transient outward) potassium channel activity(GO:0005250)
0.1 0.2 GO:0030882 lipid antigen binding(GO:0030882)
0.1 0.3 GO:0031843 neuropeptide Y receptor binding(GO:0031841) type 2 neuropeptide Y receptor binding(GO:0031843)
0.0 0.4 GO:0004965 G-protein coupled GABA receptor activity(GO:0004965)
0.0 0.3 GO:0008603 cAMP-dependent protein kinase regulator activity(GO:0008603)
0.0 0.3 GO:1990050 phosphatidic acid transporter activity(GO:1990050)
0.0 0.1 GO:0015218 pyrimidine nucleotide transmembrane transporter activity(GO:0015218)
0.0 0.3 GO:0098809 nitrite reductase activity(GO:0098809)
0.0 0.1 GO:0005333 dopamine transmembrane transporter activity(GO:0005329) dopamine:sodium symporter activity(GO:0005330) norepinephrine transmembrane transporter activity(GO:0005333) norepinephrine:sodium symporter activity(GO:0005334)
0.0 0.4 GO:0031628 opioid receptor binding(GO:0031628)
0.0 0.2 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356) ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.0 0.1 GO:0017064 fatty acid amide hydrolase activity(GO:0017064)
0.0 0.4 GO:0043994 H3 histone acetyltransferase activity(GO:0010484) histone acetyltransferase activity (H3-K23 specific)(GO:0043994)
0.0 0.8 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.2 GO:0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity(GO:0015016)
0.0 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.0 0.2 GO:0008273 calcium, potassium:sodium antiporter activity(GO:0008273)
0.0 0.4 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.1 GO:0000099 sulfur amino acid transmembrane transporter activity(GO:0000099)
0.0 0.1 GO:0004619 bisphosphoglycerate mutase activity(GO:0004082) phosphoglycerate mutase activity(GO:0004619)
0.0 0.2 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829)
0.0 0.2 GO:0071558 histone demethylase activity (H3-K27 specific)(GO:0071558)
0.0 0.1 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142) ethanolaminephosphotransferase activity(GO:0004307)
0.0 0.1 GO:0016316 phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316)
0.0 0.1 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.5 GO:0098632 protein binding involved in cell-cell adhesion(GO:0098632)
0.0 0.8 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 0.1 GO:0035613 RNA stem-loop binding(GO:0035613)
0.0 0.2 GO:0030507 spectrin binding(GO:0030507)
0.0 0.1 GO:0004630 phospholipase D activity(GO:0004630)
0.0 0.1 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.2 GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.0 0.2 GO:0030296 protein tyrosine kinase activator activity(GO:0030296)
0.0 0.2 GO:0045159 myosin II binding(GO:0045159)
0.0 0.1 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.1 GO:0099530 G-protein coupled receptor activity involved in regulation of postsynaptic membrane potential(GO:0099530)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 0.2 GO:0015280 ligand-gated sodium channel activity(GO:0015280)
0.0 0.2 GO:0008532 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532)
0.0 0.5 GO:0009931 calcium-dependent protein serine/threonine kinase activity(GO:0009931)
0.0 0.2 GO:0015187 glycine transmembrane transporter activity(GO:0015187)
0.0 0.2 GO:0031078 histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.0 0.5 GO:0001786 phosphatidylserine binding(GO:0001786)
0.0 0.1 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.1 GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238)
0.0 0.1 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.0 GO:0008929 triose-phosphate isomerase activity(GO:0004807) methylglyoxal synthase activity(GO:0008929)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 0.4 PID GLYPICAN 1PATHWAY Glypican 1 network
0.0 0.3 PID RHOA PATHWAY RhoA signaling pathway
0.0 0.3 PID PRL SIGNALING EVENTS PATHWAY Signaling events mediated by PRL
0.0 0.2 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 REACTOME DSCAM INTERACTIONS Genes involved in DSCAM interactions
0.0 0.2 REACTOME ROLE OF SECOND MESSENGERS IN NETRIN1 SIGNALING Genes involved in Role of second messengers in netrin-1 signaling
0.0 0.3 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.0 0.2 REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1 Genes involved in Signaling by activated point mutants of FGFR1
0.0 0.2 REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING Genes involved in Downregulation of ERBB2:ERBB3 signaling
0.0 0.3 REACTOME KINESINS Genes involved in Kinesins
0.0 0.1 REACTOME RAP1 SIGNALLING Genes involved in Rap1 signalling
0.0 0.2 REACTOME CGMP EFFECTS Genes involved in cGMP effects
0.0 0.4 REACTOME VOLTAGE GATED POTASSIUM CHANNELS Genes involved in Voltage gated Potassium channels