PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
onecut2 | dr11_v1_chr21_-_1742159_1742159 | 0.79 | 1.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_+_3828560 Show fit | 1.96 |
ENSDART00000185273
ENSDART00000179091 |
glutamate decarboxylase 1b |
|
chr1_-_21409877 Show fit | 1.93 |
ENSDART00000102782
|
glutamate receptor, ionotropic, AMPA 2a |
|
chr25_-_9805269 Show fit | 1.48 |
ENSDART00000192048
|
leucine rich repeat containing 4C |
|
chr25_+_7229046 Show fit | 1.38 |
ENSDART00000149965
ENSDART00000041820 |
leucine rich repeat and Ig domain containing 1a |
|
chr5_+_27267186 Show fit | 1.37 |
ENSDART00000182238
ENSDART00000087857 |
unc-5 netrin receptor Db |
|
chr18_+_50276653 Show fit | 1.35 |
ENSDART00000192120
|
si:dkey-105e17.1 |
|
chr4_+_26628822 Show fit | 1.32 |
ENSDART00000191030
ENSDART00000186113 ENSDART00000186764 ENSDART00000165158 |
IQ motif and Sec7 domain 3a |
|
chr4_-_5291256 Show fit | 1.31 |
ENSDART00000150864
|
si:ch211-214j24.9 |
|
chr18_+_50276337 Show fit | 1.23 |
ENSDART00000140352
|
si:dkey-105e17.1 |
|
chr8_-_23081511 Show fit | 1.21 |
ENSDART00000142015
ENSDART00000135764 ENSDART00000147021 |
si:dkey-70p6.1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | GO:0007257 | activation of JUN kinase activity(GO:0007257) positive regulation of JUN kinase activity(GO:0043507) |
0.7 | 2.0 | GO:0009449 | gamma-aminobutyric acid biosynthetic process(GO:0009449) |
0.1 | 1.9 | GO:0048899 | anterior lateral line development(GO:0048899) |
0.1 | 1.8 | GO:0050796 | regulation of insulin secretion(GO:0050796) |
0.0 | 1.8 | GO:0051260 | protein homooligomerization(GO:0051260) |
0.2 | 1.7 | GO:0038007 | netrin-activated signaling pathway(GO:0038007) |
0.0 | 1.4 | GO:0031103 | axon regeneration(GO:0031103) |
0.0 | 1.3 | GO:0032012 | ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012) |
0.0 | 1.2 | GO:0050868 | negative regulation of T cell activation(GO:0050868) negative regulation of leukocyte cell-cell adhesion(GO:1903038) |
0.0 | 1.2 | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
0.0 | 1.2 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 1.2 | GO:0045121 | membrane raft(GO:0045121) membrane microdomain(GO:0098857) |
0.0 | 1.1 | GO:0035869 | ciliary transition zone(GO:0035869) |
0.1 | 0.9 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.0 | 0.9 | GO:0034705 | voltage-gated potassium channel complex(GO:0008076) potassium channel complex(GO:0034705) |
0.0 | 0.7 | GO:0005849 | mRNA cleavage factor complex(GO:0005849) |
0.0 | 0.7 | GO:0001518 | voltage-gated sodium channel complex(GO:0001518) sodium channel complex(GO:0034706) |
0.0 | 0.7 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 0.6 | GO:0044224 | paranode region of axon(GO:0033270) juxtaparanode region of axon(GO:0044224) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.4 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.2 | 2.2 | GO:0004706 | JUN kinase kinase kinase activity(GO:0004706) |
0.7 | 2.0 | GO:0004351 | glutamate decarboxylase activity(GO:0004351) |
0.1 | 1.9 | GO:0004971 | AMPA glutamate receptor activity(GO:0004971) |
0.2 | 1.7 | GO:0005042 | netrin receptor activity(GO:0005042) |
0.1 | 1.4 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.0 | 1.3 | GO:0005251 | delayed rectifier potassium channel activity(GO:0005251) |
0.2 | 1.0 | GO:0010858 | calcium-dependent protein kinase inhibitor activity(GO:0008427) calcium-dependent protein kinase regulator activity(GO:0010858) |
0.0 | 1.0 | GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115) |
0.0 | 1.0 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 1.1 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 0.7 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 0.5 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 0.4 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | REACTOME G ALPHA S SIGNALLING EVENTS | Genes involved in G alpha (s) signalling events |
0.0 | 1.0 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.0 | 0.8 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
0.0 | 0.7 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.0 | 0.7 | REACTOME PROCESSING OF INTRONLESS PRE MRNAS | Genes involved in Processing of Intronless Pre-mRNAs |
0.0 | 0.7 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.0 | 0.5 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 0.5 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.0 | 0.4 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.0 | 0.3 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |