PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
nr1d2a | dr11_v1_chr16_+_50089417_50089417 | 0.71 | 1.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_70155935 Show fit | 2.02 |
ENSDART00000165570
|
regulator of G protein signaling 3a |
|
chr17_-_6738538 Show fit | 1.92 |
ENSDART00000157125
|
visinin-like 1b |
|
chr7_+_40228422 Show fit | 1.53 |
ENSDART00000052222
|
protein tyrosine phosphatase, receptor type, N polypeptide 2 |
|
chr18_-_39473055 Show fit | 1.52 |
ENSDART00000122930
|
secretogranin III |
|
chr6_+_57541776 Show fit | 1.46 |
ENSDART00000157330
|
N-terminal EF-hand calcium binding protein 3 |
|
chr23_+_19564392 Show fit | 1.40 |
ENSDART00000144746
|
ATPase H+ transporting accessory protein 1 like b |
|
chr3_+_35298078 Show fit | 1.37 |
ENSDART00000110126
|
calcium channel, voltage-dependent, gamma subunit 3b |
|
chr17_-_15528597 Show fit | 1.29 |
ENSDART00000150232
|
FYN proto-oncogene, Src family tyrosine kinase a |
|
chr25_+_6306885 Show fit | 1.26 |
ENSDART00000142705
ENSDART00000067510 |
cellular retinoic acid binding protein 1a |
|
chr3_-_2592350 Show fit | 1.24 |
ENSDART00000192325
|
si:dkey-217f16.5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.0 | GO:2000051 | regulation of Wnt signaling pathway, calcium modulating pathway(GO:0008591) negative regulation of non-canonical Wnt signaling pathway(GO:2000051) |
0.2 | 1.5 | GO:0042983 | amyloid precursor protein biosynthetic process(GO:0042983) regulation of amyloid precursor protein biosynthetic process(GO:0042984) |
0.1 | 1.4 | GO:0098943 | neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943) |
0.0 | 1.4 | GO:0030641 | regulation of cellular pH(GO:0030641) |
0.3 | 1.3 | GO:0016103 | diterpenoid catabolic process(GO:0016103) terpenoid catabolic process(GO:0016115) retinoic acid catabolic process(GO:0034653) |
0.2 | 1.3 | GO:0034334 | adherens junction maintenance(GO:0034334) |
0.1 | 1.2 | GO:0021794 | thalamus development(GO:0021794) |
0.1 | 1.1 | GO:0030011 | maintenance of cell polarity(GO:0030011) |
0.0 | 1.1 | GO:0038061 | NIK/NF-kappaB signaling(GO:0038061) |
0.0 | 1.1 | GO:0007249 | I-kappaB kinase/NF-kappaB signaling(GO:0007249) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.5 | GO:0030667 | secretory granule membrane(GO:0030667) |
0.0 | 1.5 | GO:0030141 | secretory granule(GO:0030141) |
0.0 | 1.5 | GO:0031985 | Golgi cisterna(GO:0031985) |
0.2 | 1.4 | GO:0033181 | plasma membrane proton-transporting V-type ATPase complex(GO:0033181) |
0.0 | 1.4 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
0.1 | 1.0 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.0 | 0.9 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 0.8 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.1 | 0.5 | GO:0005790 | smooth endoplasmic reticulum(GO:0005790) |
0.0 | 0.5 | GO:0034751 | aryl hydrocarbon receptor complex(GO:0034751) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
0.2 | 1.3 | GO:0001972 | retinoic acid binding(GO:0001972) |
0.0 | 1.3 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.1 | 0.9 | GO:0050291 | sphingosine N-acyltransferase activity(GO:0050291) |
0.0 | 0.9 | GO:1904315 | neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential(GO:0099529) transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1904315) |
0.1 | 0.8 | GO:0031386 | protein tag(GO:0031386) |
0.0 | 0.8 | GO:0008553 | hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) |
0.0 | 0.8 | GO:0051018 | protein kinase A binding(GO:0051018) |
0.1 | 0.7 | GO:0004743 | pyruvate kinase activity(GO:0004743) |
0.1 | 0.7 | GO:0004865 | protein serine/threonine phosphatase inhibitor activity(GO:0004865) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.9 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.7 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.0 | 0.6 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.6 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 0.5 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.0 | 0.9 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.0 | 0.6 | REACTOME REGULATION OF KIT SIGNALING | Genes involved in Regulation of KIT signaling |
0.0 | 0.5 | REACTOME CIRCADIAN CLOCK | Genes involved in Circadian Clock |
0.0 | 0.4 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |