PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
mta3 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000054903	metastasis associated 1 family, member 3
mta3 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000113436	metastasis associated 1 family, member 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mta3	dr11_v1_chr12_+_25223843_25223873	0.80	1.0e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr21_+_25187210 Show fit	0.50	ENSDART00000101147 ENSDART00000167528	si:dkey-183i3.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-183i3.5
chr1_+_15062 Show fit	0.23	ENSDART00000169005	cep97 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 97
chr5_-_38170996 Show fit	0.18	ENSDART00000145805	si:ch211-284e13.12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-284e13.12
chr7_+_1579510 Show fit	0.16	ENSDART00000190525	supt16h Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SPT16 homolog, facilitates chromatin remodeling subunit
chr7_+_1579236 Show fit	0.14	ENSDART00000172830	supt16h Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SPT16 homolog, facilitates chromatin remodeling subunit
chr8_+_27555314 Show fit	0.14	ENSDART00000135568 ENSDART00000016696	rhocb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ras homolog family member Cb
chr4_+_77971104 Show fit	0.13	ENSDART00000188609	zgc:113921 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113921
chr13_+_23093743 Show fit	0.13	ENSDART00000148034	pik3ap1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphoinositide-3-kinase adaptor protein 1
chr2_-_16359042 Show fit	0.12	ENSDART00000057216	arhgef4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rho guanine nucleotide exchange factor (GEF) 4
chr22_+_26703026 Show fit	0.10	ENSDART00000158756	crebbpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CREB binding protein a
chr16_-_23800484 Show fit	0.09	ENSDART00000139964	rps27.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribosomal protein S27, isoform 2
chr21_+_45712247 Show fit	0.09	ENSDART00000163982	camlg Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium modulating ligand
chr7_+_1467863 Show fit	0.09	ENSDART00000173433	emc4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ER membrane protein complex subunit 4
chr25_-_35106751 Show fit	0.08	ENSDART00000180682 ENSDART00000073457	zgc:194989 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:194989
chr20_-_33675676 Show fit	0.07	ENSDART00000147168	rock2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	rho-associated, coiled-coil containing protein kinase 2b
chr5_+_66433287 Show fit	0.07	ENSDART00000170757	kntc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinetochore associated 1
chr20_+_9474841 Show fit	0.07	ENSDART00000053847	rad51b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAD51 paralog B
chr22_-_367569 Show fit	0.06	ENSDART00000041895	ssu72 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SSU72 homolog, RNA polymerase II CTD phosphatase
chr17_-_25630822 Show fit	0.06	ENSDART00000126201 ENSDART00000105503 ENSDART00000151878	rab3gap2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	RAB3 GTPase activating protein subunit 2 (non-catalytic)
chr13_+_1100197 Show fit	0.06	ENSDART00000139560	ppp3r1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 3, regulatory subunit B, alpha a
chr15_-_25198107 Show fit	0.05	ENSDART00000159793	mnta Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAX network transcriptional repressor a
chr12_+_13348918 Show fit	0.05	ENSDART00000181373	rnasen Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ribonuclease type III, nuclear
chr16_+_11029762 Show fit	0.05	ENSDART00000091183	erfl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Ets2 repressor factor like 3
chr10_-_43928937 Show fit	0.05	ENSDART00000168014 ENSDART00000086220	mctp1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	multiple C2 domains, transmembrane 1b
chr6_+_3334710 Show fit	0.05	ENSDART00000132848	st3gal3a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ST3 beta-galactoside alpha-2,3-sialyltransferase 3a
chr1_+_14454663 Show fit	0.05	ENSDART00000005067	rbpja Links NCBI UniProt ZFIN ENSEMBL Google Show fit	recombination signal binding protein for immunoglobulin kappa J region a
chr20_-_14665002 Show fit	0.05	ENSDART00000152816	scrn2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	secernin 2
chr5_+_20453874 Show fit	0.04	ENSDART00000124545 ENSDART00000008402	sart3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	squamous cell carcinoma antigen recognized by T cells 3
chr4_+_69577362 Show fit	0.04	ENSDART00000160913	znf1030 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zinc finger protein 1030
chr5_+_45139196 Show fit	0.04	ENSDART00000113738	smarca2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr5_+_45138934 Show fit	0.04	ENSDART00000041412 ENSDART00000136002	smarca2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr7_+_1550966 Show fit	0.04	ENSDART00000177863 ENSDART00000126840	supt16h Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SPT16 homolog, facilitates chromatin remodeling subunit
chr16_-_280835 Show fit	0.04	ENSDART00000190541	LO017917.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr22_+_344763 Show fit	0.04	ENSDART00000181934	CU914780.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr20_-_51727860 Show fit	0.04	ENSDART00000147044	brox Links NCBI UniProt ZFIN ENSEMBL Google Show fit	BRO1 domain and CAAX motif containing
chr2_+_13069168 Show fit	0.04	ENSDART00000192832	prkag2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein kinase, AMP-activated, gamma 2 non-catalytic subunit b
chr21_+_44581654 Show fit	0.03	ENSDART00000187201 ENSDART00000180360 ENSDART00000191543 ENSDART00000180039 ENSDART00000186308	TMEM164 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein 164
chr18_-_45736 Show fit	0.03	ENSDART00000148373 ENSDART00000148950	gatm Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycine amidinotransferase (L-arginine:glycine amidinotransferase)
chr20_-_54435287 Show fit	0.03	ENSDART00000148632	yy1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	YY1 transcription factor b
chr3_-_5228137 Show fit	0.03	ENSDART00000137105	myh9b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin, heavy chain 9b, non-muscle
chr2_-_56095275 Show fit	0.03	ENSDART00000154701	si:ch211-178n15.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-178n15.1
chr10_-_9115383 Show fit	0.02	ENSDART00000139324	si:dkeyp-41f9.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-41f9.3
chr22_-_193234 Show fit	0.01	ENSDART00000131067	fbxo42 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	F-box protein 42
chr16_+_13822137 Show fit	0.01	ENSDART00000163251	flcn Links NCBI UniProt ZFIN ENSEMBL Google Show fit	folliculin
chr13_+_31545812 Show fit	0.01	ENSDART00000076527	ppm1aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase, Mg2+/Mn2+ dependent, 1Aa
chr5_-_54712159 Show fit	0.01	ENSDART00000149207	ccnb1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cyclin B1
chr18_-_46010 Show fit	0.01	ENSDART00000052641	gatm Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycine amidinotransferase (L-arginine:glycine amidinotransferase)
chr14_-_237130 Show fit	0.01	ENSDART00000164988	bod1l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	biorientation of chromosomes in cell division 1-like 1
chr13_-_10431476 Show fit	0.01	ENSDART00000133968	camkmt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calmodulin-lysine N-methyltransferase
chr11_-_20956309 Show fit	0.00	ENSDART00000188659	CABZ01008739.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr8_+_43056153 Show fit	0.00	ENSDART00000186377	prnpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	prion protein a
chr23_+_2825940 Show fit	0.00	ENSDART00000135781	plcg1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phospholipase C, gamma 1
chr12_-_290413 Show fit	0.00	ENSDART00000152496	adprm Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0034724	DNA replication-independent nucleosome organization(GO:0034724)
0.0	0.1	GO:0070940	dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0	0.1	GO:1902766	skeletal muscle satellite cell migration(GO:1902766)
0.0	0.2	GO:1900407	regulation of cellular response to oxidative stress(GO:1900407)
0.0	0.0	GO:0006601	creatine metabolic process(GO:0006600) creatine biosynthetic process(GO:0006601)
0.0	0.0	GO:1903003	positive regulation of protein deubiquitination(GO:1903003)
0.0	0.1	GO:0031507	heterochromatin assembly(GO:0031507)
0.0	0.0	GO:0072314	glomerular visceral epithelial cell fate commitment(GO:0072149) glomerular epithelial cell fate commitment(GO:0072314)
0.0	0.1	GO:0045050	protein insertion into ER membrane by stop-transfer membrane-anchor sequence(GO:0045050)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0035101	FACT complex(GO:0035101)
0.0	0.1	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	REACTOME ELONGATION ARREST AND RECOVERY	Genes involved in Elongation arrest and recovery