PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hoxd11a | dr11_v1_chr9_-_1978090_1978090 | -0.50 | 3.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_44805028 Show fit | 0.78 |
ENSDART00000141198
|
cathepsin La |
|
chr5_+_44805269 Show fit | 0.69 |
ENSDART00000136965
|
cathepsin La |
|
chr12_-_20373058 Show fit | 0.66 |
ENSDART00000066382
|
aquaporin 8a, tandem duplicate 1 |
|
chr15_+_20403903 Show fit | 0.56 |
ENSDART00000134182
|
cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) |
|
chr8_-_2616326 Show fit | 0.52 |
ENSDART00000027214
|
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a |
|
chr13_-_36034582 Show fit | 0.50 |
ENSDART00000133565
|
si:dkey-157l19.2 |
|
chr7_-_16562200 Show fit | 0.48 |
ENSDART00000169093
ENSDART00000173491 |
cysteine and glycine-rich protein 3 (cardiac LIM protein) |
|
chr4_+_7391110 Show fit | 0.47 |
ENSDART00000160708
ENSDART00000187823 |
troponin I4a |
|
chr23_+_7379728 Show fit | 0.42 |
ENSDART00000012194
|
GATA binding protein 5 |
|
chr3_+_19299309 Show fit | 0.42 |
ENSDART00000046297
ENSDART00000146955 |
low density lipoprotein receptor a |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.6 | GO:0097250 | mitochondrial respiratory chain supercomplex assembly(GO:0097250) |
0.0 | 0.6 | GO:0030968 | endoplasmic reticulum unfolded protein response(GO:0030968) |
0.1 | 0.5 | GO:0035994 | response to muscle stretch(GO:0035994) |
0.1 | 0.4 | GO:0048618 | post-embryonic foregut morphogenesis(GO:0048618) |
0.1 | 0.4 | GO:0032367 | intracellular cholesterol transport(GO:0032367) |
0.0 | 0.4 | GO:0014823 | response to activity(GO:0014823) |
0.0 | 0.4 | GO:0060030 | dorsal convergence(GO:0060030) |
0.1 | 0.3 | GO:0010430 | fatty acid omega-oxidation(GO:0010430) |
0.1 | 0.3 | GO:1901841 | regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842) |
0.1 | 0.3 | GO:0035988 | chondrocyte proliferation(GO:0035988) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 0.3 | GO:0031430 | M band(GO:0031430) |
0.0 | 0.3 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.1 | 0.2 | GO:1990909 | Wnt signalosome(GO:1990909) |
0.0 | 0.2 | GO:0005964 | phosphorylase kinase complex(GO:0005964) |
0.0 | 0.2 | GO:0031209 | SCAR complex(GO:0031209) |
0.0 | 0.2 | GO:1990907 | beta-catenin-TCF complex(GO:1990907) |
0.0 | 0.2 | GO:0034992 | microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993) |
0.0 | 0.2 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.0 | 0.1 | GO:1990131 | EGO complex(GO:0034448) Gtr1-Gtr2 GTPase complex(GO:1990131) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.8 | GO:0015250 | water channel activity(GO:0015250) |
0.0 | 0.6 | GO:0015002 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
0.0 | 0.5 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.1 | 0.4 | GO:0030228 | lipoprotein particle receptor activity(GO:0030228) |
0.1 | 0.3 | GO:0004161 | dimethylallyltranstransferase activity(GO:0004161) geranyltranstransferase activity(GO:0004337) |
0.1 | 0.3 | GO:0015562 | protein-transmembrane transporting ATPase activity(GO:0015462) efflux transmembrane transporter activity(GO:0015562) |
0.1 | 0.3 | GO:0004743 | pyruvate kinase activity(GO:0004743) |
0.0 | 0.3 | GO:0032217 | riboflavin transporter activity(GO:0032217) |
0.0 | 0.3 | GO:0035497 | cAMP response element binding(GO:0035497) |
0.0 | 0.3 | GO:0005246 | calcium channel regulator activity(GO:0005246) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.0 | 0.2 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 0.1 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |