PRJNA207719: Tissue specific transcriptome profiling
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hoxb10a | dr11_v1_chr3_+_23669267_23669267 | -0.50 | 3.9e-01 | Click! |
hoxc10a | dr11_v1_chr23_+_36083529_36083617 | 0.11 | 8.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr23_+_17417539 Show fit | 0.92 |
ENSDART00000182605
|
|
|
chr1_-_38195012 Show fit | 0.85 |
ENSDART00000020409
|
heart and neural crest derivatives expressed 2 |
|
chr4_+_7391110 Show fit | 0.84 |
ENSDART00000160708
ENSDART00000187823 |
troponin I4a |
|
chr4_+_7391400 Show fit | 0.72 |
ENSDART00000169111
ENSDART00000186395 |
troponin I4a |
|
chr23_+_7379728 Show fit | 0.70 |
ENSDART00000012194
|
GATA binding protein 5 |
|
chr11_-_18253111 Show fit | 0.48 |
ENSDART00000125984
|
musculoskeletal, embryonic nuclear protein 1b |
|
chr7_-_16562200 Show fit | 0.46 |
ENSDART00000169093
ENSDART00000173491 |
cysteine and glycine-rich protein 3 (cardiac LIM protein) |
|
chr24_+_1042594 Show fit | 0.44 |
ENSDART00000109117
|
si:dkey-192l18.9 |
|
chr13_-_12660318 Show fit | 0.42 |
ENSDART00000008498
|
alcohol dehydrogenase 8a |
|
chr5_+_15202495 Show fit | 0.42 |
ENSDART00000144915
|
T-box 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.1 | 0.8 | GO:0071908 | determination of intestine left/right asymmetry(GO:0071908) |
0.0 | 0.8 | GO:0048247 | lymphocyte chemotaxis(GO:0048247) |
0.2 | 0.7 | GO:0048618 | post-embryonic foregut morphogenesis(GO:0048618) |
0.1 | 0.7 | GO:0009263 | deoxyribonucleotide biosynthetic process(GO:0009263) |
0.1 | 0.5 | GO:0035994 | response to muscle stretch(GO:0035994) |
0.1 | 0.5 | GO:0035988 | chondrocyte proliferation(GO:0035988) |
0.0 | 0.5 | GO:0016925 | protein sumoylation(GO:0016925) |
0.1 | 0.4 | GO:0003156 | regulation of organ formation(GO:0003156) |
0.1 | 0.4 | GO:2000580 | positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | GO:0005861 | troponin complex(GO:0005861) |
0.1 | 0.5 | GO:0030915 | Smc5-Smc6 complex(GO:0030915) |
0.0 | 0.4 | GO:0005868 | cytoplasmic dynein complex(GO:0005868) |
0.0 | 0.4 | GO:0048787 | presynaptic active zone membrane(GO:0048787) |
0.1 | 0.3 | GO:0005797 | Golgi medial cisterna(GO:0005797) |
0.0 | 0.3 | GO:0005853 | eukaryotic translation elongation factor 1 complex(GO:0005853) |
0.0 | 0.2 | GO:0030891 | VCB complex(GO:0030891) |
0.0 | 0.1 | GO:0097125 | cyclin B1-CDK1 complex(GO:0097125) |
0.0 | 0.1 | GO:0030689 | Noc complex(GO:0030689) |
0.0 | 0.1 | GO:0017177 | glucosidase II complex(GO:0017177) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.8 | GO:0031726 | CCR1 chemokine receptor binding(GO:0031726) CCR4 chemokine receptor binding(GO:0031729) |
0.1 | 0.7 | GO:0016728 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731) |
0.1 | 0.6 | GO:0015250 | water channel activity(GO:0015250) |
0.0 | 0.6 | GO:0008009 | chemokine activity(GO:0008009) |
0.0 | 0.5 | GO:0061665 | SUMO ligase activity(GO:0061665) |
0.0 | 0.5 | GO:0042805 | actinin binding(GO:0042805) |
0.1 | 0.4 | GO:0051903 | alcohol dehydrogenase activity, zinc-dependent(GO:0004024) S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903) |
0.0 | 0.4 | GO:0045505 | dynein intermediate chain binding(GO:0045505) |
0.0 | 0.3 | GO:0070530 | K63-linked polyubiquitin binding(GO:0070530) |
0.0 | 0.3 | GO:0035497 | cAMP response element binding(GO:0035497) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.0 | 0.4 | REACTOME ACTIVATION OF BH3 ONLY PROTEINS | Genes involved in Activation of BH3-only proteins |
0.0 | 0.3 | REACTOME PHOSPHORYLATION OF THE APC C | Genes involved in Phosphorylation of the APC/C |
0.0 | 0.2 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.0 | 0.1 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
0.0 | 0.1 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |