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PRJNA207719: Tissue specific transcriptome profiling

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Results for grhl1

Z-value: 4.15

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Transcription factors associated with grhl1

Gene Symbol Gene ID Gene Info
grhl1
ENSDARG00000061391 grainyhead-like transcription factor 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
grhl1dr11_v1_chr17_-_32426392_324264130.819.5e-02Click!

Activity profile of grhl1 motif

Sorted Z-values of grhl1 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr5_+_58665648 6.40 ENSDART00000167481
zgc:194948
zgc:194948
chr15_+_42560354 5.37 ENSDART00000059484
CLDN8 (1 of many)
zgc:110333
chr9_-_30264415 4.50 ENSDART00000060150
mid1ip1a
MID1 interacting protein 1a
chr24_+_38671054 4.50 ENSDART00000154214
si:ch73-70c5.1
si:ch73-70c5.1
chr4_+_76722754 4.39 ENSDART00000153867
ms4a17a.3
membrane-spanning 4-domains, subfamily A, member 17A.3
chr15_-_12360409 4.30 ENSDART00000164596
tmprss13a
transmembrane protease, serine 13a
chr1_-_48933 4.17 ENSDART00000171162
ildr1a
immunoglobulin-like domain containing receptor 1a
chr10_-_22127942 4.03 ENSDART00000133374
ponzr2
plac8 onzin related protein 2
chr16_+_35905031 3.97 ENSDART00000162411
sh3d21
SH3 domain containing 21
chr17_+_28102487 3.87 ENSDART00000131638
ENSDART00000076265
zgc:91908
zgc:91908
chr16_+_23431189 3.83 ENSDART00000004679
icn
ictacalcin
chr5_-_6567464 3.81 ENSDART00000184985
tnks1bp1
tankyrase 1 binding protein 1
chr21_+_11244068 3.71 ENSDART00000163432
arid6
AT-rich interaction domain 6
chr14_-_763744 3.53 ENSDART00000165856
trim35-27
tripartite motif containing 35-27
chr22_+_19552987 3.51 ENSDART00000105315
hsd11b1la
hydroxysteroid (11-beta) dehydrogenase 1-like a
chr12_-_28794957 3.48 ENSDART00000020667
osbpl7
oxysterol binding protein-like 7
chr4_-_9780931 3.44 ENSDART00000134280
ENSDART00000150664
ENSDART00000150304
ENSDART00000080744
svopl
SVOP-like
chr7_+_19835569 3.39 ENSDART00000149812
ovol1a
ovo-like zinc finger 1a
chr21_+_25625026 3.34 ENSDART00000134678
ovol1b
ovo-like zinc finger 1b
chr13_+_18533005 3.32 ENSDART00000136024
ftr14l
finTRIM family, member 14-like
chr1_-_52498146 3.16 ENSDART00000122217
acy3.2
aspartoacylase (aminocyclase) 3, tandem duplicate 2
chr16_+_17715243 3.04 ENSDART00000149437
ENSDART00000149596
si:dkey-87o1.2
si:dkey-87o1.2
chr8_-_24252933 2.92 ENSDART00000057624
zgc:110353
zgc:110353
chr14_+_146857 2.84 ENSDART00000122521
CABZ01088229.1

chr7_-_24193051 2.76 ENSDART00000169737
ENSDART00000171085
si:ch211-216p19.6
si:ch211-216p19.6
chr17_+_22102791 2.74 ENSDART00000047772
mal
mal, T cell differentiation protein
chr15_+_22014029 2.73 ENSDART00000079504
ankk1
ankyrin repeat and kinase domain containing 1
chr16_-_31976269 2.73 ENSDART00000139664
styk1
serine/threonine/tyrosine kinase 1
chr15_+_41919484 2.59 ENSDART00000099821
ENSDART00000146246
nlrp16
NACHT, LRR and PYD domains-containing protein 16
chr21_-_3700334 2.59 ENSDART00000137844
atp8b1
ATPase phospholipid transporting 8B1
chr1_-_52497834 2.51 ENSDART00000136469
ENSDART00000004233
acy3.2
aspartoacylase (aminocyclase) 3, tandem duplicate 2
chr6_+_23057311 2.50 ENSDART00000026448
evpla
envoplakin a
chr3_-_29977495 2.45 ENSDART00000077111
hsd17b14
hydroxysteroid (17-beta) dehydrogenase 14
chr22_+_25672155 2.40 ENSDART00000087769
si:ch211-250e5.2
si:ch211-250e5.2
chr2_-_47620806 2.38 ENSDART00000038228
ap1s3b
adaptor-related protein complex 1, sigma 3 subunit, b
chr9_-_40014339 2.38 ENSDART00000166918
IKZF2
si:zfos-1425h8.1
chr7_-_56606752 2.36 ENSDART00000138714
sult5a1
sulfotransferase family 5A, member 1
chr22_+_22021936 2.27 ENSDART00000149586
gna15.1
guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1
chr19_-_32500373 2.27 ENSDART00000052104
fuca1.1
alpha-L-fucosidase 1, tandem duplicate 1
chr3_-_16537441 2.26 ENSDART00000080749
ENSDART00000133824
eps8l1
eps8-like1
chr22_-_14361022 2.23 ENSDART00000140224
si:dkeyp-122a9.2
si:dkeyp-122a9.2
chr2_+_5521671 2.14 ENSDART00000099647
ENSDART00000138443
crfb16
cytokine receptor family member B16
chr5_-_37900350 2.14 ENSDART00000084839
ENSDART00000084841
ENSDART00000133437
tmprss13b
transmembrane protease, serine 13b
chr3_-_18756076 2.08 ENSDART00000055766
zgc:113333
zgc:113333
chr8_+_3405612 2.04 ENSDART00000163437
zgc:112433
zgc:112433
chr23_-_22650668 2.03 ENSDART00000132733
ca6
carbonic anhydrase VI
chr4_-_12725513 1.95 ENSDART00000132286
mgst1.2
microsomal glutathione S-transferase 1.2
chr7_+_54259657 1.91 ENSDART00000170174
pacsin3
protein kinase C and casein kinase substrate in neurons 3
chr10_-_36793412 1.90 ENSDART00000185966
dhrs13a.2
dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2
chr14_+_45702521 1.74 ENSDART00000112470
ccdc88b
coiled-coil domain containing 88B
chr23_-_22650992 1.74 ENSDART00000079007
ca6
carbonic anhydrase VI
chr1_-_47161996 1.68 ENSDART00000053153
mhc1zba
major histocompatibility complex class I ZBA
chr2_-_58075414 1.63 ENSDART00000161920
nectin4
nectin cell adhesion molecule 4
chr13_+_42544009 1.60 ENSDART00000145409
si:dkey-221j11.3
si:dkey-221j11.3
chr6_+_30668098 1.59 ENSDART00000112294
ttc22
tetratricopeptide repeat domain 22
chr15_+_509126 1.56 ENSDART00000102274
ftr86
finTRIM family, member 86
chr3_-_18755651 1.55 ENSDART00000145277
zgc:113333
zgc:113333
chr22_-_22337382 1.55 ENSDART00000144684
si:ch211-129c21.1
si:ch211-129c21.1
chr12_+_4036409 1.44 ENSDART00000106650
zgc:123217
zgc:123217
chr5_-_57686487 1.43 ENSDART00000074264
crfb12
cytokine receptor family member B12
chr10_+_4924388 1.38 ENSDART00000108595
slc46a2
solute carrier family 46 member 2
chr5_-_29570141 1.36 ENSDART00000043259
entpd2a.2
ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2
chr12_+_30360579 1.34 ENSDART00000152900
si:ch211-225b10.3
si:ch211-225b10.3
chr8_-_36399884 1.29 ENSDART00000108538
si:zfos-2070c2.3
si:zfos-2070c2.3
chr3_+_37196258 1.24 ENSDART00000187944
ENSDART00000185896
fmnl1a
formin-like 1a
chr25_-_24202576 1.23 ENSDART00000048507
uevld
UEV and lactate/malate dehyrogenase domains
chr15_-_5901514 1.21 ENSDART00000155252
si:ch73-281n10.2
si:ch73-281n10.2
chr14_-_45702721 1.20 ENSDART00000165727
si:dkey-226n24.1
si:dkey-226n24.1
chr3_+_34140507 1.18 ENSDART00000131802
si:dkey-204f11.64
si:dkey-204f11.64
chr1_+_49352900 1.08 ENSDART00000008468
msx1b
muscle segment homeobox 1b
chr15_+_41901970 1.06 ENSDART00000152724
si:ch211-191a16.5
si:ch211-191a16.5
chr3_-_32831429 1.03 ENSDART00000184932
zgc:153733
zgc:153733
chr25_+_7435291 0.89 ENSDART00000172567
ENSDART00000163017
prc1a
protein regulator of cytokinesis 1a
chr3_-_32831971 0.88 ENSDART00000075270
zgc:153733
zgc:153733
chr22_-_13649588 0.81 ENSDART00000131877
si:ch211-279g13.1
si:ch211-279g13.1
chr11_-_45140227 0.73 ENSDART00000184062
cant1b
calcium activated nucleotidase 1b
chr24_+_42074143 0.71 ENSDART00000170514
top1mt
DNA topoisomerase I mitochondrial
chr8_-_13029297 0.65 ENSDART00000144305
dennd2da
DENN/MADD domain containing 2Da
chr4_-_26413391 0.64 ENSDART00000145955
b4galnt3a
beta-1,4-N-acetyl-galactosaminyl transferase 3a
chr12_+_31673588 0.64 ENSDART00000152971
dnmbp
dynamin binding protein
chr1_-_9858508 0.63 ENSDART00000147904
mad1l1
mitotic arrest deficient 1 like 1
chr1_-_31105376 0.59 ENSDART00000132466
ppp1r9alb
protein phosphatase 1 regulatory subunit 9A-like B
chr19_-_10432134 0.57 ENSDART00000081440
il11b
interleukin 11b
chr19_-_41472228 0.57 ENSDART00000113388
dlx5a
distal-less homeobox 5a
chr15_+_41901710 0.54 ENSDART00000159874
si:ch211-191a16.5
si:ch211-191a16.5
chr16_+_53526135 0.52 ENSDART00000083558
smpd5
sphingomyelin phosphodiesterase 5
chr4_+_4232562 0.48 ENSDART00000177529
smkr1
small lysine rich protein 1
chr21_-_13668358 0.45 ENSDART00000180323
pnpla7a
patatin-like phospholipase domain containing 7a
chr23_-_19225709 0.43 ENSDART00000080099
oard1
O-acyl-ADP-ribose deacylase 1
chr7_+_22657566 0.35 ENSDART00000141048
ponzr5
plac8 onzin related protein 5
chr14_+_46216703 0.19 ENSDART00000136045
ENSDART00000142317
mgst2
microsomal glutathione S-transferase 2
chr9_-_14108896 0.18 ENSDART00000135209
prkag3b
protein kinase, AMP-activated, gamma 3b non-catalytic subunit
chr24_-_8412526 0.18 ENSDART00000150055
slc35b3
solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
chr21_+_5801105 0.16 ENSDART00000151225
ENSDART00000184487
ccng2
cyclin G2
chr20_-_42378865 0.16 ENSDART00000139912
ENSDART00000015801
dcbld1
discoidin, CUB and LCCL domain containing 1
chr11_+_8152872 0.12 ENSDART00000091638
ENSDART00000138057
ENSDART00000166379
samd13
sterile alpha motif domain containing 13
chr10_+_19525839 0.10 ENSDART00000162912
ENSDART00000158512
vsig8a
V-set and immunoglobulin domain containing 8a
chr13_-_30161684 0.09 ENSDART00000040409
ppa1b
pyrophosphatase (inorganic) 1b
chr14_+_4276394 0.02 ENSDART00000038301
gnpda2
glucosamine-6-phosphate deaminase 2
chr8_-_13541514 0.02 ENSDART00000063834
zgc:86586
zgc:86586

Network of associatons between targets according to the STRING database.

First level regulatory network of grhl1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.4 GO:0070285 pigment cell development(GO:0070285)
0.4 2.3 GO:0006004 fucose metabolic process(GO:0006004)
0.3 1.5 GO:0010693 regulation of alkaline phosphatase activity(GO:0010692) negative regulation of alkaline phosphatase activity(GO:0010693)
0.2 1.4 GO:0071405 response to methanol(GO:0033986) cellular response to methanol(GO:0071405)
0.2 1.9 GO:0014028 notochord formation(GO:0014028)
0.1 1.9 GO:0001881 receptor recycling(GO:0001881)
0.1 2.3 GO:0060158 phospholipase C-activating dopamine receptor signaling pathway(GO:0060158)
0.1 1.9 GO:0042574 retinal metabolic process(GO:0042574)
0.1 2.4 GO:0051923 sulfation(GO:0051923)
0.1 0.9 GO:0051256 mitotic spindle elongation(GO:0000022) spindle elongation(GO:0051231) mitotic spindle midzone assembly(GO:0051256)
0.1 4.5 GO:0046890 regulation of lipid biosynthetic process(GO:0046890)
0.1 2.6 GO:0045332 phospholipid translocation(GO:0045332)
0.1 3.8 GO:0036269 swimming behavior(GO:0036269)
0.1 0.6 GO:0021553 olfactory nerve development(GO:0021553) olfactory nerve morphogenesis(GO:0021627) olfactory nerve formation(GO:0021628)
0.1 0.6 GO:0051315 attachment of mitotic spindle microtubules to kinetochore(GO:0051315)
0.1 2.5 GO:0045103 intermediate filament-based process(GO:0045103) intermediate filament cytoskeleton organization(GO:0045104)
0.1 0.5 GO:0006685 sphingomyelin catabolic process(GO:0006685)
0.0 0.7 GO:0006265 DNA topological change(GO:0006265)
0.0 0.2 GO:0019370 leukotriene metabolic process(GO:0006691) leukotriene biosynthetic process(GO:0019370)
0.0 0.9 GO:0043049 otic placode formation(GO:0043049)
0.0 1.3 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 3.3 GO:0009913 epidermal cell differentiation(GO:0009913)
0.0 1.7 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 1.2 GO:0030866 cortical actin cytoskeleton organization(GO:0030866)
0.0 1.4 GO:0007596 blood coagulation(GO:0007596)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.5 GO:0097038 perinuclear endoplasmic reticulum(GO:0097038)
0.1 1.2 GO:0031680 G-protein beta/gamma-subunit complex(GO:0031680)
0.1 0.9 GO:1990023 mitotic spindle midzone(GO:1990023)
0.1 1.3 GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116)
0.0 2.3 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 5.7 GO:0016324 apical plasma membrane(GO:0016324)
0.0 4.5 GO:0005802 trans-Golgi network(GO:0005802)
0.0 2.4 GO:0030117 membrane coat(GO:0030117) coated membrane(GO:0048475)
0.0 2.5 GO:0005882 intermediate filament(GO:0005882)
0.0 0.2 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 1.3 GO:0005795 Golgi stack(GO:0005795)
0.0 0.5 GO:0031970 mitochondrial intermembrane space(GO:0005758) organelle envelope lumen(GO:0031970)
0.0 5.4 GO:0009986 cell surface(GO:0009986)
0.0 0.6 GO:0072686 mitotic spindle(GO:0072686)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 2.3 GO:0004560 alpha-L-fucosidase activity(GO:0004560) fucosidase activity(GO:0015928)
0.5 5.7 GO:0004046 aminoacylase activity(GO:0004046)
0.4 2.5 GO:0019215 intermediate filament binding(GO:0019215)
0.4 3.6 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.3 2.3 GO:0031826 type 2A serotonin receptor binding(GO:0031826)
0.2 1.9 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.2 0.7 GO:0033149 FFAT motif binding(GO:0033149)
0.1 3.8 GO:0048306 calcium-dependent protein binding(GO:0048306)
0.1 3.5 GO:0016229 steroid dehydrogenase activity(GO:0016229)
0.1 3.8 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.1 3.5 GO:0015248 sterol transporter activity(GO:0015248)
0.1 0.6 GO:0033842 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity(GO:0033842)
0.1 2.1 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 2.1 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 1.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.2 GO:0046964 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity(GO:0046964)
0.1 1.2 GO:0031681 G-protein beta-subunit binding(GO:0031681)
0.0 1.7 GO:0051959 dynein light intermediate chain binding(GO:0051959)
0.0 0.5 GO:0004767 sphingomyelin phosphodiesterase activity(GO:0004767)
0.0 7.9 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 3.6 GO:0004896 cytokine receptor activity(GO:0004896)
0.0 2.4 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 1.5 GO:0030215 semaphorin receptor binding(GO:0030215)
0.0 0.1 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 2.1 GO:0000287 magnesium ion binding(GO:0000287)
0.0 1.2 GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0016616)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 PID CDC42 REG PATHWAY Regulation of CDC42 activity

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.8 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.2 3.8 REACTOME DEADENYLATION OF MRNA Genes involved in Deadenylation of mRNA
0.0 2.6 REACTOME ION TRANSPORT BY P TYPE ATPASES Genes involved in Ion transport by P-type ATPases
0.0 0.2 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation