ISMARA results: gmeb1

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PRJNA207719: Tissue specific transcriptome profiling

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Results for gmeb1

Z-value: 0.44

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Transcription factors associated with gmeb1

Gene Symbol	Gene ID	Gene Info
gmeb1 NCBI UniProt	ENSDARG00000062060	glucocorticoid modulatory element binding protein 1

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
gmeb1	dr11_v1_chr19_+_16064439_16064439	-0.16	8.0e-01	Click!

Activity profile of gmeb1 motif

Sorted Z-values of gmeb1 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_17676745 Show fit	0.54	ENSDART00000030665	slc25a4 NCBI UniProt Show fit	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4
chr4_-_25485404 Show fit	0.28	ENSDART00000041402	pfkfb3 NCBI UniProt Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr4_-_25485214 Show fit	0.27	ENSDART00000159941	pfkfb3 NCBI UniProt Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr16_+_23397785 Show fit	0.20	ENSDART00000148961	s100a10b NCBI UniProt Show fit	S100 calcium binding protein A10b
chr20_+_22666548 Show fit	0.20	ENSDART00000147520	lnx1 NCBI UniProt Show fit	ligand of numb-protein X 1
chr25_-_34845302 Show fit	0.14	ENSDART00000039485	gabarapl2 NCBI UniProt Show fit	GABA(A) receptor-associated protein like 2
chr16_-_24815091 Show fit	0.11	ENSDART00000154269 ENSDART00000131025	kcnn4 NCBI UniProt Show fit	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
chr21_-_8153165 Show fit	0.11	ENSDART00000182580	CABZ01074363.1 NCBI UniProt Show fit
chr14_-_8795081 Show fit	0.07	ENSDART00000106671	tgfb2l NCBI UniProt Show fit	transforming growth factor, beta 2, like
chr20_+_31287356 Show fit	0.07	ENSDART00000007688	slc22a16 NCBI UniProt Show fit	solute carrier family 22 (organic cation/carnitine transporter), member 16

Showing 1 to 10 of 32 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of gmeb1

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.5	GO:0015868	intracellular nucleoside transport(GO:0015859) purine nucleoside transmembrane transport(GO:0015860) purine nucleotide transport(GO:0015865) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) adenine nucleotide transport(GO:0051503) mitochondrial ATP transmembrane transport(GO:1990544)
0.0	0.5	GO:0006003	fructose 2,6-bisphosphate metabolic process(GO:0006003)
0.0	0.1	GO:0015695	organic cation transport(GO:0015695)
0.0	0.0	GO:0070131	regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)

Showing 1 to 4 of 4 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.5	GO:0005471	ATP:ADP antiporter activity(GO:0005471)
0.0	0.5	GO:0003873	6-phosphofructo-2-kinase activity(GO:0003873)
0.0	0.1	GO:0016286	small conductance calcium-activated potassium channel activity(GO:0016286)
0.0	0.1	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)

Showing 1 to 4 of 4 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	PID HIF1 TFPATHWAY	HIF-1-alpha transcription factor network

Showing 1 to 1 of 1 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	REACTOME GLYCOLYSIS	Genes involved in Glycolysis
0.0	0.5	REACTOME INTERACTIONS OF VPR WITH HOST CELLULAR PROTEINS	Genes involved in Interactions of Vpr with host cellular proteins

Showing 1 to 2 of 2 entries

Results for gmeb1

Z-value: 0.44

Motif logo

Transcription factors associated with gmeb1

Activity-expression correlation:

Activity profile of gmeb1 motif

Sorted Z-values of gmeb1 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of gmeb1

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: