PRJNA207719: Tissue specific transcriptome profiling

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
dlx5a Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000042296	distal-less homeobox 5a

Gene	Promoter	Pearson corr. coef.	P-value	Plot
dlx5a	dr11_v1_chr19_-_41472228_41472228	0.28	6.4e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr21_+_6751405 Show fit	0.71	ENSDART00000037265 ENSDART00000146371	olfm1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	olfactomedin 1b
chr23_+_40460333 Show fit	0.61	ENSDART00000184658	soga3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SOGA family member 3b
chr2_+_6253246 Show fit	0.54	ENSDART00000058256 ENSDART00000076700	zp3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 3b
chr21_+_6751760 Show fit	0.53	ENSDART00000135914	olfm1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	olfactomedin 1b
chr7_+_69019851 Show fit	0.51	ENSDART00000162891	CABZ01057488.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr2_-_33645411 Show fit	0.40	ENSDART00000114663	b4galt2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr7_+_29955368 Show fit	0.40	ENSDART00000173686	tpma Links NCBI UniProt ZFIN ENSEMBL Google Show fit	alpha-tropomyosin
chr17_+_43867889 Show fit	0.39	ENSDART00000132673 ENSDART00000167214	zgc:66313 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:66313
chr6_-_6487876 Show fit	0.38	ENSDART00000137642	cep170ab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	centrosomal protein 170Ab
chr17_+_43863708 Show fit	0.36	ENSDART00000133874 ENSDART00000140316 ENSDART00000142929 ENSDART00000148090	zgc:66313 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:66313
chr10_+_19596214 Show fit	0.34	ENSDART00000183110	CABZ01059626.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr15_-_44512461 Show fit	0.31	ENSDART00000155456	gria4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glutamate receptor, ionotropic, AMPA 4a
chr3_-_46817499 Show fit	0.30	ENSDART00000013717	elavl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ELAV like neuron-specific RNA binding protein 3
chr3_+_26019426 Show fit	0.28	ENSDART00000135389 ENSDART00000182411	foxred2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FAD-dependent oxidoreductase domain containing 2
chr11_+_23760470 Show fit	0.28	ENSDART00000175688 ENSDART00000121874 ENSDART00000086720	nfasca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neurofascin homolog (chicken) a
chr2_-_17694504 Show fit	0.27	ENSDART00000133709	ptprfb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein tyrosine phosphatase, receptor type, f, b
chr6_+_3680651 Show fit	0.26	ENSDART00000013588	klhl41b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kelch-like family member 41b
chr11_+_30057762 Show fit	0.26	ENSDART00000164139	nhsb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Nance-Horan syndrome b (congenital cataracts and dental anomalies)
chr11_-_44801968 Show fit	0.24	ENSDART00000161846	map1lc3c Links NCBI UniProt ZFIN ENSEMBL Google Show fit	microtubule-associated protein 1 light chain 3 gamma
chr20_-_47188966 Show fit	0.24	ENSDART00000152965	si:dkeyp-104f11.9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-104f11.9
chr15_+_15856178 Show fit	0.23	ENSDART00000080338	dusp14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dual specificity phosphatase 14
chr2_+_11205795 Show fit	0.22	ENSDART00000019078	lhx8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LIM homeobox 8a
chr19_+_5480327 Show fit	0.22	ENSDART00000148794	jupb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	junction plakoglobin b
chr3_+_17537352 Show fit	0.20	ENSDART00000104549	hcrt Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hypocretin (orexin) neuropeptide precursor
chr10_-_35149513 Show fit	0.19	ENSDART00000063434 ENSDART00000131291	ripk4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	receptor-interacting serine-threonine kinase 4
chr16_+_45425181 Show fit	0.18	ENSDART00000168591	phf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PHD finger protein 1
chr8_-_50888806 Show fit	0.17	ENSDART00000053750	acsl2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	acyl-CoA synthetase long chain family member 2
chr11_-_6188413 Show fit	0.16	ENSDART00000109972	ccl44 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chemokine (C-C motif) ligand 44
chr12_+_1469090 Show fit	0.15	ENSDART00000183637	usp22 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ubiquitin specific peptidase 22
chr2_-_2451181 Show fit	0.15	ENSDART00000101033	pth1ra Links NCBI UniProt ZFIN ENSEMBL Google Show fit	parathyroid hormone 1 receptor a
chr17_+_49500820 Show fit	0.14	ENSDART00000170306	AREL1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apoptosis resistant E3 ubiquitin protein ligase 1
chr16_+_45424907 Show fit	0.14	ENSDART00000134471	phf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PHD finger protein 1
chr2_-_21819421 Show fit	0.13	ENSDART00000121586	chd7 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chromodomain helicase DNA binding protein 7
chr24_-_31843173 Show fit	0.12	ENSDART00000185782	steap2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	STEAP family member 2, metalloreductase
chr16_+_35661331 Show fit	0.12	ENSDART00000161725	map7d1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAP7 domain containing 1a
chr16_-_35329803 Show fit	0.12	ENSDART00000161729 ENSDART00000157700 ENSDART00000184584 ENSDART00000174713 ENSDART00000162518	ptprub Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein tyrosine phosphatase, receptor type, U, b
chr16_+_54263921 Show fit	0.12	ENSDART00000002856	drd2l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	dopamine receptor D2 like
chr11_+_31864921 Show fit	0.11	ENSDART00000180252	diaph3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	diaphanous-related formin 3
chr5_+_66433287 Show fit	0.10	ENSDART00000170757	kntc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	kinetochore associated 1
chr23_+_31912882 Show fit	0.10	ENSDART00000140505	armc1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	armadillo repeat containing 1, like
chr7_-_69647988 Show fit	0.10	ENSDART00000169943	LO018231.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr16_-_42056137 Show fit	0.10	ENSDART00000102798	zp3d.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zona pellucida glycoprotein 3d tandem duplicate 2
chr24_+_7336411 Show fit	0.10	ENSDART00000191170	kmt2ca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	lysine (K)-specific methyltransferase 2Ca
chr23_+_33963619 Show fit	0.09	ENSDART00000140666 ENSDART00000084792	plpbp Links NCBI UniProt ZFIN ENSEMBL Google Show fit	pyridoxal phosphate binding protein
chr15_+_29140126 Show fit	0.09	ENSDART00000060034	zgc:113149 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:113149
chr10_+_2529037 Show fit	0.08	ENSDART00000123467	zmp:0000001301 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zmp:0000001301
chr23_+_31913292 Show fit	0.08	ENSDART00000136910	armc1l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	armadillo repeat containing 1, like
chr20_+_39457598 Show fit	0.08	ENSDART00000140931 ENSDART00000156176	pimr128 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 128
chr10_-_40968095 Show fit	0.08	ENSDART00000184104	npffr1l1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuropeptide FF receptor 1 like 1
chr23_-_31913231 Show fit	0.08	ENSDART00000146852 ENSDART00000085054	mtfr2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	mitochondrial fission regulator 2
chr5_-_27867657 Show fit	0.08	ENSDART00000112495	tcima Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transcriptional and immune response regulator a
chr25_-_34632050 Show fit	0.08	ENSDART00000170671	megf8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	multiple EGF-like-domains 8
chr7_-_12464412 Show fit	0.08	ENSDART00000178723	adamtsl3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ADAMTS-like 3
chr4_-_71153608 Show fit	0.08	ENSDART00000190144 ENSDART00000158406	si:dkey-193i10.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-193i10.4
chr15_+_1796313 Show fit	0.08	ENSDART00000126253	fam124b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 124B
chr13_-_31435137 Show fit	0.07	ENSDART00000057441	rtn1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	reticulon 1a
chr5_-_30620625 Show fit	0.07	ENSDART00000098273	tcnl Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transcobalamin like
chr4_-_5795309 Show fit	0.07	ENSDART00000039987	pgm3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phosphoglucomutase 3
chr16_+_35661771 Show fit	0.07	ENSDART00000161393	map7d1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	MAP7 domain containing 1a
chr6_-_40922971 Show fit	0.06	ENSDART00000155363	sfi1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SFI1 centrin binding protein
chr13_+_24829996 Show fit	0.06	ENSDART00000147194	si:ch211-223p8.8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-223p8.8
chr4_-_32466676 Show fit	0.06	ENSDART00000193347 ENSDART00000169396 ENSDART00000145784	si:dkey-16p6.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-16p6.1
chr13_-_33227411 Show fit	0.05	ENSDART00000057386	golga5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	golgin A5
chr14_-_14705750 Show fit	0.05	ENSDART00000168092	ogt.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1
chr14_+_11290828 Show fit	0.05	ENSDART00000184078	rlim Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein, LIM domain interacting
chr4_-_63848305 Show fit	0.05	ENSDART00000097308	BX901974.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr9_-_49964810 Show fit	0.04	ENSDART00000167098	scn1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sodium channel, voltage-gated, type I, alpha
chr17_-_43863700 Show fit	0.04	ENSDART00000157530	ahsa1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	AHA1, activator of heat shock protein ATPase homolog 1b
chr3_-_23512285 Show fit	0.04	ENSDART00000159151	BX682558.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr9_+_13229585 Show fit	0.03	ENSDART00000154879 ENSDART00000141705	carf Links NCBI UniProt ZFIN ENSEMBL Google Show fit	calcium responsive transcription factor
chr16_+_31804590 Show fit	0.03	ENSDART00000167321	wnt4b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	wingless-type MMTV integration site family, member 4b
chr18_+_28106139 Show fit	0.03	ENSDART00000089615	kiaa1549lb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	KIAA1549-like b
chr1_+_40199074 Show fit	0.03	ENSDART00000179679 ENSDART00000136849	si:ch211-113e8.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-113e8.5
chr8_-_537716 Show fit	0.03	ENSDART00000051777	zgc:101664 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:101664
chr12_-_14211293 Show fit	0.03	ENSDART00000158399	avl9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	AVL9 homolog (S. cerevisiase)
chr20_-_14114078 Show fit	0.03	ENSDART00000168434 ENSDART00000104032	si:ch211-223m11.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-223m11.2
chr23_+_2906031 Show fit	0.03	ENSDART00000109304	c23h20orf24 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	c23h20orf24 homolog (H. sapiens)
chr8_-_39822917 Show fit	0.03	ENSDART00000067843	zgc:162025 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:162025
chr17_+_41343167 Show fit	0.02	ENSDART00000156405	mocs1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	molybdenum cofactor synthesis 1
chr19_+_15521997 Show fit	0.02	ENSDART00000003164	ppp1r8a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein phosphatase 1, regulatory subunit 8a
chr4_-_68868700 Show fit	0.02	ENSDART00000187985	si:dkey-264f17.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-264f17.5
chr19_+_19512515 Show fit	0.02	ENSDART00000180065	jazf1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	JAZF zinc finger 1a
chr25_-_7705487 Show fit	0.02	ENSDART00000128099	prdm11 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	PR domain containing 11
chr19_+_20793237 Show fit	0.02	ENSDART00000014774	txnl4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thioredoxin-like 4A
chr18_+_11970987 Show fit	0.02	ENSDART00000144111	si:dkeyp-2c8.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-2c8.3
chr10_-_26512742 Show fit	0.01	ENSDART00000135951	si:dkey-5g14.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-5g14.1
chr8_-_52413032 Show fit	0.00	ENSDART00000183039	CABZ01070469.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr4_+_9400012 Show fit	0.00	ENSDART00000191960	tmtc1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane and tetratricopeptide repeat containing 1
chr17_+_25187226 Show fit	0.00	ENSDART00000148431	cln8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	CLN8, transmembrane ER and ERGIC protein
chr21_+_39948300 Show fit	0.00	ENSDART00000137740	slc47a1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 47 (multidrug and toxin extrusion), member 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0042755	eating behavior(GO:0042755)
0.0	0.2	GO:0002159	desmosome assembly(GO:0002159)
0.0	0.6	GO:0060046	binding of sperm to zona pellucida(GO:0007339) sperm-egg recognition(GO:0035036) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0	0.1	GO:0015677	copper ion import(GO:0015677)
0.0	0.3	GO:0097374	sensory neuron axon guidance(GO:0097374)
0.0	0.3	GO:0031060	regulation of histone methylation(GO:0031060)
0.0	0.3	GO:0035914	skeletal muscle cell differentiation(GO:0035914)
0.0	0.2	GO:0006995	cellular response to nitrogen starvation(GO:0006995) cellular response to nitrogen levels(GO:0043562)
0.0	0.0	GO:0061400	positive regulation of transcription from RNA polymerase II promoter in response to calcium ion(GO:0061400)
0.0	0.1	GO:0048796	rRNA transcription(GO:0009303) swim bladder maturation(GO:0048796) swim bladder inflation(GO:0048798)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0030057	desmosome(GO:0030057)
0.0	0.3	GO:0033017	sarcoplasmic reticulum membrane(GO:0033017)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	GO:0035804	structural constituent of egg coat(GO:0035804)
0.0	0.1	GO:0052851	cupric reductase activity(GO:0008823) ferric-chelate reductase (NADPH) activity(GO:0052851)
0.0	0.2	GO:0045294	alpha-catenin binding(GO:0045294)
0.0	0.3	GO:0004971	AMPA glutamate receptor activity(GO:0004971)
0.0	0.1	GO:0032190	acrosin binding(GO:0032190)
0.0	0.2	GO:0047676	arachidonate-CoA ligase activity(GO:0047676)
0.0	0.4	GO:0008378	galactosyltransferase activity(GO:0008378)
0.0	0.2	GO:0017017	MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) MAP kinase phosphatase activity(GO:0033549)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	REACTOME KERATAN SULFATE BIOSYNTHESIS	Genes involved in Keratan sulfate biosynthesis