ISMARA results: cxxc1a+cxxc1b+mbd1a

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PRJNA207719: Tissue specific transcriptome profiling

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Results for cxxc1a+cxxc1b+mbd1a

Z-value: 0.14

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Transcription factors associated with cxxc1a+cxxc1b+mbd1a

Gene Symbol	Gene ID	Gene Info
cxxc1b NCBI UniProt	ENSDARG00000025718	CXXC finger protein 1b
mbd1a NCBI UniProt	ENSDARG00000101205	methyl-CpG binding domain protein 1a
cxxc1a NCBI UniProt	ENSDARG00000101996	CXXC finger protein 1a
cxxc1b NCBI UniProt	ENSDARG00000111907	CXXC finger protein 1b

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
mbd1a	dr11_v1_chr8_+_7875110_7875142	0.72	1.7e-01	Click!
cxxc1a	dr11_v1_chr8_+_7854130_7854130	0.48	4.1e-01	Click!
cxxc1b	dr11_v1_chr11_+_25539698_25539698	0.31	6.1e-01	Click!

Activity profile of cxxc1a+cxxc1b+mbd1a motif

Sorted Z-values of cxxc1a+cxxc1b+mbd1a motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr21_-_23746916 Show fit	0.08	ENSDART00000017229	ncam1a NCBI UniProt Show fit	neural cell adhesion molecule 1a
chr17_+_3390772 Show fit	0.05	ENSDART00000160073	sntg2 NCBI UniProt Show fit	syntrophin, gamma 2
chr1_+_41690402 Show fit	0.05	ENSDART00000177298	fbxo41 NCBI UniProt Show fit	F-box protein 41
chr24_+_35183595 Show fit	0.05	ENSDART00000075142	pcmtd1 NCBI UniProt Show fit	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr21_+_2721752 Show fit	0.04	ENSDART00000174953	CABZ01073424.1 NCBI UniProt Show fit
chr3_-_19200571 Show fit	0.04	ENSDART00000131503 ENSDART00000012335	rfx1a NCBI UniProt Show fit	regulatory factor X, 1a (influences HLA class II expression)
chr21_-_28901095 Show fit	0.03	ENSDART00000180820	cxxc5a NCBI UniProt Show fit	CXXC finger protein 5a
chr15_-_3940671 Show fit	0.00	ENSDART00000189741	mindy4b NCBI UniProt Show fit	MINDY family member 4B
chr21_-_7781555 Show fit	0.00	ENSDART00000084380 ENSDART00000189131	aggf1 NCBI UniProt Show fit	angiogenic factor with G patch and FHA domains 1
chr14_-_48786708 Show fit	0.00	ENSDART00000169730	si:ch211-199b20.3 NCBI UniProt Show fit	si:ch211-199b20.3

Showing 1 to 10 of 13 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of cxxc1a+cxxc1b+mbd1a

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0021961	posterior commissure morphogenesis(GO:0021961)

Showing 1 to 1 of 1 entries