ISMARA results: cux1a

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PRJNA207719: Tissue specific transcriptome profiling

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Results for cux1a

Z-value: 0.21

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Transcription factors associated with cux1a

Gene Symbol	Gene ID	Gene Info
cux1a NCBI UniProt	ENSDARG00000078459	cut-like homeobox 1a

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
cux1a	dr11_v1_chr10_-_33156789_33156789	0.88	4.9e-02	Click!

Activity profile of cux1a motif

Sorted Z-values of cux1a motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr9_-_35334642 Show fit	0.18	ENSDART00000157195	ncam2 NCBI UniProt Show fit	neural cell adhesion molecule 2
chr25_+_21324588 Show fit	0.17	ENSDART00000151842	lrrn3a NCBI UniProt Show fit	leucine rich repeat neuronal 3a
chr23_-_33986762 Show fit	0.14	ENSDART00000144609	tmed4 NCBI UniProt Show fit	transmembrane p24 trafficking protein 4
chr4_-_25485404 Show fit	0.13	ENSDART00000041402	pfkfb3 NCBI UniProt Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr18_-_40481028 Show fit	0.13	ENSDART00000134177	zgc:101040 NCBI UniProt Show fit	zgc:101040
chr6_-_29105727 Show fit	0.13	ENSDART00000184355	fam69ab NCBI UniProt Show fit	family with sequence similarity 69, member Ab
chr17_+_45454943 Show fit	0.12	ENSDART00000074838	kcnk3b NCBI UniProt Show fit	potassium channel, subfamily K, member 3b
chr18_+_45571378 Show fit	0.11	ENSDART00000077251	kifc3 NCBI UniProt Show fit	kinesin family member C3
chr20_-_18736281 Show fit	0.11	ENSDART00000142837	enpp5 NCBI UniProt Show fit	ectonucleotide pyrophosphatase/phosphodiesterase 5
chr12_-_7607114 Show fit	0.11	ENSDART00000158095	slc16a9b NCBI UniProt Show fit	solute carrier family 16, member 9b

Showing 1 to 10 of 69 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of cux1a

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0060829	negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060829)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0005252	open rectifier potassium channel activity(GO:0005252)
0.0	0.1	GO:0004060	arylamine N-acetyltransferase activity(GO:0004060)
0.0	0.1	GO:0016531	copper chaperone activity(GO:0016531)

Showing 1 to 3 of 3 entries