ISMARA results: creb3l1

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PRJNA207719: Tissue specific transcriptome profiling

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Results for creb3l1

Z-value: 0.44

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Transcription factors associated with creb3l1

Gene Symbol	Gene ID	Gene Info
creb3l1 NCBI UniProt	ENSDARG00000015793	cAMP responsive element binding protein 3-like 1

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
creb3l1	dr11_v1_chr7_+_38897836_38897836	-0.81	9.6e-02	Click!

Activity profile of creb3l1 motif

Sorted Z-values of creb3l1 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_68562464 Show fit	0.43	ENSDART00000192954	BX548011.4 NCBI UniProt Show fit
chr22_-_2886937 Show fit	0.38	ENSDART00000063533	aqp12 NCBI UniProt Show fit	aquaporin 12
chr21_-_43636595 Show fit	0.25	ENSDART00000151115 ENSDART00000151486 ENSDART00000151778	si:ch1073-263o8.2 NCBI UniProt Show fit	si:ch1073-263o8.2
chr1_-_7930679 Show fit	0.24	ENSDART00000146090	si:dkey-79f11.10 NCBI UniProt Show fit	si:dkey-79f11.10
chr15_-_41245962 Show fit	0.22	ENSDART00000155359	smco4 NCBI UniProt Show fit	single-pass membrane protein with coiled-coil domains 4
chr4_-_26095755 Show fit	0.19	ENSDART00000100611 ENSDART00000191266	si:ch211-244b2.3 NCBI UniProt Show fit	si:ch211-244b2.3
chr18_-_34549721 Show fit	0.19	ENSDART00000137101 ENSDART00000021880	ssr3 NCBI UniProt Show fit	signal sequence receptor, gamma
chr18_-_7481036 Show fit	0.18	ENSDART00000101292	si:dkey-238c7.16 NCBI UniProt Show fit	si:dkey-238c7.16
chr5_+_32924669 Show fit	0.17	ENSDART00000085219	lmo4a NCBI UniProt Show fit	LIM domain only 4a
chr4_-_17812131 Show fit	0.16	ENSDART00000025731	spic NCBI UniProt Show fit	Spi-C transcription factor (Spi-1/PU.1 related)

Showing 1 to 10 of 82 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of creb3l1

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.7	GO:0071391	cellular response to estrogen stimulus(GO:0071391)
0.1	0.2	GO:0006589	octopamine biosynthetic process(GO:0006589) dopamine catabolic process(GO:0042420) norepinephrine biosynthetic process(GO:0042421) octopamine metabolic process(GO:0046333)
0.1	0.2	GO:0010265	SCF complex assembly(GO:0010265)
0.0	0.2	GO:0006614	SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0	0.1	GO:0070278	extracellular matrix constituent secretion(GO:0070278)
0.0	0.1	GO:0071260	cellular response to mechanical stimulus(GO:0071260)
0.0	0.1	GO:0006621	protein retention in ER lumen(GO:0006621)
0.0	0.1	GO:0009298	GDP-mannose biosynthetic process(GO:0009298)
0.0	0.1	GO:1905066	regulation of canonical Wnt signaling pathway involved in heart development(GO:1905066)

Showing 1 to 9 of 9 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0033018	sarcoplasmic reticulum lumen(GO:0033018)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0005537	mannose binding(GO:0005537)
0.1	0.2	GO:0004500	dopamine beta-monooxygenase activity(GO:0004500)
0.0	0.1	GO:0005093	Rab GDP-dissociation inhibitor activity(GO:0005093)
0.0	0.1	GO:0046923	ER retention sequence binding(GO:0046923)
0.0	0.1	GO:0004475	mannose-1-phosphate guanylyltransferase activity(GO:0004475) mannose-phosphate guanylyltransferase activity(GO:0008905)
0.0	0.1	GO:0016774	phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0	0.1	GO:0017150	tRNA dihydrouridine synthase activity(GO:0017150)
0.0	0.1	GO:0008508	bile acid:sodium symporter activity(GO:0008508)
0.0	0.1	GO:0030620	U2 snRNA binding(GO:0030620)

Showing 1 to 9 of 9 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS	Genes involved in Facilitative Na+-independent glucose transporters

Showing 1 to 1 of 1 entries

Results for creb3l1

Z-value: 0.44

Motif logo

Transcription factors associated with creb3l1

Activity-expression correlation:

Activity profile of creb3l1 motif

Sorted Z-values of creb3l1 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of creb3l1

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: