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PRJNA207719: Tissue specific transcriptome profiling
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Results for cebpd
Z-value: 1.27
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Transcription factors associated with cebpd
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| cebpd | dr11_v1_chr24_+_35564668_35564668 | 0.03 | 9.7e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr5_-_63509581 Show fit | 1.05 |
ENSDART00000097325
|
complement component 5 |
|
| chr6_-_11780070 Show fit | 0.92 |
ENSDART00000151195
|
membrane-associated ring finger (C3HC4) 7 |
|
| chr20_+_23440632 Show fit | 0.92 |
ENSDART00000180685
ENSDART00000042820 |
si:dkey-90m5.4 |
|
| chr14_+_16345003 Show fit | 0.90 |
ENSDART00000003040
ENSDART00000165193 |
intelectin 3 |
|
| chr12_+_46960579 Show fit | 0.89 |
ENSDART00000149032
|
ornithine aminotransferase |
|
| chr2_-_30460293 Show fit | 0.86 |
ENSDART00000113193
|
cerebellin 2a precursor |
|
| chr21_+_17051478 Show fit | 0.85 |
ENSDART00000047201
ENSDART00000161650 ENSDART00000167298 |
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a |
|
| chr1_-_10071422 Show fit | 0.84 |
ENSDART00000135522
ENSDART00000033118 |
fibrinogen alpha chain |
|
| chr5_-_43935119 Show fit | 0.80 |
ENSDART00000142271
|
si:ch211-204c21.1 |
|
| chr2_-_54387550 Show fit | 0.79 |
ENSDART00000097388
|
N-ethylmaleimide-sensitive factor attachment protein, gamma b |
Network of associatons between targets according to the STRING database.
First level regulatory network of cebpd
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.5 | GO:0008343 | adult feeding behavior(GO:0008343) |
| 0.1 | 1.5 | GO:0045807 | positive regulation of endocytosis(GO:0045807) |
| 0.0 | 1.0 | GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157) |
| 0.1 | 0.9 | GO:0055129 | proline biosynthetic process(GO:0006561) L-proline biosynthetic process(GO:0055129) |
| 0.0 | 0.9 | GO:0008016 | regulation of heart contraction(GO:0008016) |
| 0.1 | 0.8 | GO:0072378 | blood coagulation, fibrin clot formation(GO:0072378) |
| 0.0 | 0.8 | GO:0031638 | zymogen activation(GO:0031638) |
| 0.0 | 0.7 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
| 0.0 | 0.7 | GO:0019432 | triglyceride biosynthetic process(GO:0019432) |
| 0.2 | 0.6 | GO:0015670 | carbon dioxide transport(GO:0015670) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.0 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
| 0.0 | 0.9 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
| 0.3 | 0.8 | GO:0005577 | fibrinogen complex(GO:0005577) |
| 0.0 | 0.6 | GO:0045180 | basal cortex(GO:0045180) |
| 0.0 | 0.6 | GO:0044853 | caveola(GO:0005901) plasma membrane raft(GO:0044853) |
| 0.1 | 0.5 | GO:0070044 | synaptobrevin 2-SNAP-25-syntaxin-1a complex(GO:0070044) |
| 0.1 | 0.5 | GO:0005826 | actomyosin contractile ring(GO:0005826) |
| 0.1 | 0.5 | GO:0033010 | paranodal junction(GO:0033010) |
| 0.0 | 0.4 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
| 0.1 | 0.3 | GO:0035339 | SPOTS complex(GO:0035339) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.7 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
| 0.2 | 1.3 | GO:0005483 | soluble NSF attachment protein activity(GO:0005483) |
| 0.0 | 1.2 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
| 0.0 | 1.0 | GO:0004089 | carbonate dehydratase activity(GO:0004089) |
| 0.1 | 0.9 | GO:0008553 | hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) |
| 0.0 | 0.9 | GO:0070492 | oligosaccharide binding(GO:0070492) |
| 0.0 | 0.9 | GO:0008483 | transaminase activity(GO:0008483) |
| 0.0 | 0.8 | GO:0005044 | scavenger receptor activity(GO:0005044) |
| 0.1 | 0.7 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
| 0.1 | 0.7 | GO:0004144 | diacylglycerol O-acyltransferase activity(GO:0004144) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.8 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
| 0.0 | 0.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
| 0.0 | 0.6 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
| 0.0 | 0.4 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
| 0.0 | 0.3 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
| 0.0 | 0.2 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.3 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
| 0.1 | 1.1 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
| 0.1 | 1.0 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
| 0.1 | 0.8 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
| 0.0 | 0.7 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
| 0.2 | 0.6 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII | Genes involved in CREB phosphorylation through the activation of CaMKII |
| 0.0 | 0.2 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
| 0.0 | 0.1 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |
| 0.0 | 0.1 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |