ISMARA results: znf410

Project

PRJNA195909:zebrafish embryo and larva development

Navigation

Downloads

Results for znf410

Z-value: 0.57

Motif logo

Transcription factors associated with znf410

Gene Symbol	Gene ID	Gene Info
znf410 NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000008218	zinc finger protein 410

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
znf410	dr11_v1_chr20_+_54349333_54349461	-0.74	2.4e-02	Click!

Activity profile of znf410 motif

Sorted Z-values of znf410 motif

Top targets:

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_-_5058908 Show fit	1.61	ENSDART00000130062	chd4a NCBI UniProt ZFIN ENSEMBL Google Show fit	chromodomain helicase DNA binding protein 4a
chr19_-_5058515 Show fit	1.40	ENSDART00000150980	chd4a NCBI UniProt ZFIN ENSEMBL Google Show fit	chromodomain helicase DNA binding protein 4a
chr16_-_31791165 Show fit	1.29	ENSDART00000148389	chd4b NCBI UniProt ZFIN ENSEMBL Google Show fit	chromodomain helicase DNA binding protein 4b
chr6_+_18359306 Show fit	1.11	ENSDART00000157796	cbx8b NCBI UniProt ZFIN ENSEMBL Google Show fit	chromobox homolog 8b
chr13_-_11800281 Show fit	0.65	ENSDART00000079392	zmp:0000000662 NCBI UniProt ZFIN ENSEMBL Google Show fit	zmp:0000000662
chr10_-_35186310 Show fit	0.57	ENSDART00000127805	pom121 NCBI UniProt ZFIN ENSEMBL Google Show fit	POM121 transmembrane nucleoporin
chr4_-_70849761 Show fit	0.40	ENSDART00000168745	im:7141269 NCBI UniProt ZFIN ENSEMBL Google Show fit	im:7141269
chr19_-_977849 Show fit	0.36	ENSDART00000172303	CABZ01088282.1 NCBI UniProt ZFIN ENSEMBL Google Show fit
chr4_-_70849325 Show fit	0.35	ENSDART00000160032 ENSDART00000165872	im:7141269 NCBI UniProt ZFIN ENSEMBL Google Show fit	im:7141269
chr3_+_18567560 Show fit	0.32	ENSDART00000124329	cbx8a NCBI UniProt ZFIN ENSEMBL Google Show fit	chromobox homolog 8a (Pc class homolog, Drosophila)
chr4_+_76336370 Show fit	0.28	ENSDART00000170520	zgc:171673 NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:171673
chr10_-_94184 Show fit	0.14	ENSDART00000146125	ttc3 NCBI UniProt ZFIN ENSEMBL Google Show fit	tetratricopeptide repeat domain 3
chr5_+_59534286 Show fit	0.13	ENSDART00000189341	gtf2ird1 NCBI UniProt ZFIN ENSEMBL Google Show fit	GTF2I repeat domain containing 1

Network of associatons between targets according to the STRING database.

First level regulatory network of znf410

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	3.0	GO:0031101	fin regeneration(GO:0031101)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	3.0	GO:0090545	NuRD complex(GO:0016581) CHD-type complex(GO:0090545)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	3.0	GO:0001103	RNA polymerase II repressing transcription factor binding(GO:0001103)
0.0	0.6	GO:0008139	nuclear localization sequence binding(GO:0008139)
0.0	1.3	GO:0003678	DNA helicase activity(GO:0003678)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS	Genes involved in Transport of Ribonucleoproteins into the Host Nucleus