ISMARA results: znf384l

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PRJNA195909:zebrafish embryo and larva development

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Results for znf384l

Z-value: 1.35

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Transcription factors associated with znf384l

Gene Symbol	Gene ID	Gene Info
znf384l NCBI UniProt	ENSDARG00000001015	zinc finger protein 384 like

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
znf384l	dr11_v1_chr19_-_6983002_6983002	-0.24	5.4e-01	Click!

Activity profile of znf384l motif

Sorted Z-values of znf384l motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_-_38287987 Show fit	1.94	ENSDART00000185329 ENSDART00000061677	si:ch211-14a17.6 NCBI UniProt Show fit	si:ch211-14a17.6
chr6_-_40446536 Show fit	1.43	ENSDART00000153466	tatdn2 NCBI UniProt Show fit	TatD DNase domain containing 2
chr12_-_14143344 Show fit	1.35	ENSDART00000152742	buc2l NCBI UniProt Show fit	bucky ball 2-like
chr8_+_41048501 Show fit	1.27	ENSDART00000123288	gpat2 NCBI UniProt Show fit	glycerol-3-phosphate acyltransferase 2, mitochondrial
chr5_-_24245218 Show fit	1.13	ENSDART00000042481	phf23a NCBI UniProt Show fit	PHD finger protein 23a
chr22_+_25236888 Show fit	1.11	ENSDART00000037286	zgc:172218 NCBI UniProt Show fit	zgc:172218
chr22_+_25249193 Show fit	1.07	ENSDART00000171851	si:ch211-226h8.11 NCBI UniProt Show fit	si:ch211-226h8.11
chr20_+_35445462 Show fit	0.99	ENSDART00000124497	tdrd6 NCBI UniProt Show fit	tudor domain containing 6
chr8_-_25771474 Show fit	0.96	ENSDART00000193883	suv39h1b NCBI UniProt Show fit	suppressor of variegation 3-9 homolog 1b
chr23_+_38251864 Show fit	0.92	ENSDART00000183498 ENSDART00000129593	znf217 NCBI UniProt Show fit	zinc finger protein 217

Showing 1 to 10 of 200 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of znf384l

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	3.9	GO:0008380	RNA splicing(GO:0008380)
0.1	1.9	GO:2000344	binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0	1.5	GO:0051091	positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.3	1.3	GO:0000741	karyogamy(GO:0000741) pronuclear fusion(GO:0007344)
0.2	1.3	GO:1990511	piRNA biosynthetic process(GO:1990511)
0.0	1.3	GO:0016575	histone deacetylation(GO:0016575)
0.1	1.2	GO:0001682	tRNA 5'-leader removal(GO:0001682)
0.1	1.2	GO:0060217	hemangioblast cell differentiation(GO:0060217)
0.2	1.1	GO:1901097	negative regulation of autophagosome maturation(GO:1901097)
0.2	1.0	GO:1904667	negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)

Showing 1 to 10 of 192 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.7	GO:0005814	centriole(GO:0005814)
0.0	1.6	GO:0031227	intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.0	1.4	GO:0000775	chromosome, centromeric region(GO:0000775)
0.2	1.3	GO:0001650	fibrillar center(GO:0001650)
0.0	1.2	GO:0005643	nuclear pore(GO:0005643)
0.3	1.0	GO:0033391	chromatoid body(GO:0033391)
0.0	1.0	GO:0016592	mediator complex(GO:0016592)
0.2	0.9	GO:0043073	germ cell nucleus(GO:0043073)
0.0	0.9	GO:0005876	spindle microtubule(GO:0005876)
0.1	0.8	GO:0000127	transcription factor TFIIIC complex(GO:0000127)

Showing 1 to 10 of 96 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	2.7	GO:0003724	RNA helicase activity(GO:0003724)
0.2	1.9	GO:0046974	histone methyltransferase activity (H3-K9 specific)(GO:0046974)
0.1	1.9	GO:0032190	acrosin binding(GO:0032190)
0.1	1.6	GO:0016888	endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.2	1.3	GO:0004366	glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.3	1.2	GO:0033204	ribonuclease P RNA binding(GO:0033204)
0.1	1.0	GO:0016426	tRNA (adenine) methyltransferase activity(GO:0016426)
0.1	1.0	GO:0046975	histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.2	0.9	GO:0043139	5'-3' DNA helicase activity(GO:0043139)
0.1	0.9	GO:0043027	cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) cysteine-type endopeptidase regulator activity involved in apoptotic process(GO:0043028)

Showing 1 to 10 of 118 entries

Gene overrepresentation in curated gene sets: canonical pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	2.4	PID PLK1 PATHWAY	PLK1 signaling events
0.0	1.2	PID EPO PATHWAY	EPO signaling pathway
0.0	1.2	PID TELOMERASE PATHWAY	Regulation of Telomerase
0.0	0.9	PID SMAD2 3NUCLEAR PATHWAY	Regulation of nuclear SMAD2/3 signaling
0.0	0.9	PID HDAC CLASSI PATHWAY	Signaling events mediated by HDAC Class I
0.0	0.7	PID RHOA PATHWAY	RhoA signaling pathway
0.0	0.6	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.0	0.6	PID DNA PK PATHWAY	DNA-PK pathway in nonhomologous end joining
0.0	0.6	PID AR TF PATHWAY	Regulation of Androgen receptor activity
0.0	0.5	PID P38 ALPHA BETA PATHWAY	Regulation of p38-alpha and p38-beta

Showing 1 to 10 of 25 entries

Gene overrepresentation in curated gene sets: REACTOME pathways category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.8	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0	1.7	REACTOME TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM	Genes involved in Transport of Mature Transcript to Cytoplasm
0.1	1.6	REACTOME MEIOTIC RECOMBINATION	Genes involved in Meiotic Recombination
0.0	1.6	REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S	Genes involved in Activation of Chaperone Genes by XBP1(S)
0.1	1.3	REACTOME SYNTHESIS OF PA	Genes involved in Synthesis of PA
0.1	1.2	REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS	Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0	1.1	REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 2 PROMOTER	Genes involved in RNA Polymerase III Transcription Initiation From Type 2 Promoter
0.0	1.1	REACTOME MEIOTIC SYNAPSIS	Genes involved in Meiotic Synapsis
0.0	1.0	REACTOME G1 S SPECIFIC TRANSCRIPTION	Genes involved in G1/S-Specific Transcription
0.0	1.0	REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION	Genes involved in Transcriptional Regulation of White Adipocyte Differentiation

Showing 1 to 10 of 51 entries

Results for znf384l

Z-value: 1.35

Motif logo

Transcription factors associated with znf384l

Activity-expression correlation:

Activity profile of znf384l motif

Sorted Z-values of znf384l motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of znf384l

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: