PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
tp53 | dr11_v1_chr5_+_24089334_24089334 | 0.46 | 2.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_+_35043007 Show fit | 1.67 |
ENSDART00000086954
|
sestrin 3 |
|
chr24_+_22485710 Show fit | 1.28 |
ENSDART00000146058
|
si:dkey-40h20.1 |
|
chr21_+_25688388 Show fit | 1.17 |
ENSDART00000125709
|
bicaudal-D-related protein 2 |
|
chr20_-_27225876 Show fit | 1.16 |
ENSDART00000149204
ENSDART00000149732 |
si:dkey-85n7.7 |
|
chr25_-_7520937 Show fit | 1.15 |
ENSDART00000170050
|
cyclin-dependent kinase inhibitor 1Cb |
|
chr10_-_4980150 Show fit | 1.11 |
ENSDART00000093228
|
methionine adenosyltransferase II, alpha-like |
|
chr15_-_29387446 Show fit | 1.08 |
ENSDART00000145976
ENSDART00000035096 |
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b |
|
chr23_-_5759242 Show fit | 0.99 |
ENSDART00000055087
|
pleckstrin homology-like domain, family A, member 3 |
|
chr19_-_27462720 Show fit | 0.99 |
ENSDART00000135901
|
si:ch73-25f10.6 |
|
chr22_+_37888249 Show fit | 0.91 |
ENSDART00000076082
|
fetuin B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0030199 | collagen fibril organization(GO:0030199) |
0.2 | 1.7 | GO:0043201 | response to leucine(GO:0043201) cellular response to leucine(GO:0071233) regulation of response to reactive oxygen species(GO:1901031) |
0.3 | 1.2 | GO:0055107 | Golgi to secretory granule transport(GO:0055107) |
0.2 | 1.2 | GO:0045736 | negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030) |
0.2 | 1.1 | GO:0006556 | S-adenosylmethionine biosynthetic process(GO:0006556) |
0.1 | 1.0 | GO:0051898 | negative regulation of protein kinase B signaling(GO:0051898) |
0.0 | 1.0 | GO:0035383 | acyl-CoA metabolic process(GO:0006637) thioester metabolic process(GO:0035383) |
0.2 | 0.9 | GO:1904036 | negative regulation of epithelial cell apoptotic process(GO:1904036) |
0.0 | 0.9 | GO:0010951 | negative regulation of endopeptidase activity(GO:0010951) |
0.2 | 0.8 | GO:1903589 | regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis(GO:1903587) positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis(GO:1903589) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.7 | GO:0061700 | GATOR2 complex(GO:0061700) |
0.1 | 0.8 | GO:0005750 | mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275) |
0.0 | 0.8 | GO:0016342 | catenin complex(GO:0016342) |
0.0 | 0.7 | GO:0045180 | basal cortex(GO:0045180) |
0.0 | 0.6 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 0.3 | GO:0005853 | eukaryotic translation elongation factor 1 complex(GO:0005853) |
0.0 | 0.3 | GO:0030891 | VCB complex(GO:0030891) |
0.0 | 0.3 | GO:0042788 | polysomal ribosome(GO:0042788) |
0.1 | 0.2 | GO:0032299 | ribonuclease H2 complex(GO:0032299) |
0.0 | 0.2 | GO:0045009 | melanosome membrane(GO:0033162) chitosome(GO:0045009) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.7 | GO:0070728 | leucine binding(GO:0070728) |
0.0 | 1.6 | GO:0005518 | collagen binding(GO:0005518) |
0.1 | 1.2 | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) |
0.3 | 1.1 | GO:0004478 | methionine adenosyltransferase activity(GO:0004478) |
0.3 | 1.0 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
0.1 | 1.0 | GO:0001102 | RNA polymerase II activating transcription factor binding(GO:0001102) |
0.0 | 1.0 | GO:0016790 | thiolester hydrolase activity(GO:0016790) |
0.0 | 0.9 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.3 | 0.8 | GO:1901612 | cardiolipin binding(GO:1901612) |
0.2 | 0.8 | GO:0060182 | apelin receptor activity(GO:0060182) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
0.1 | 0.5 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 0.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.0 | 0.5 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 0.5 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 0.5 | PID P53 REGULATION PATHWAY | p53 pathway |
0.0 | 0.2 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.1 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.9 | REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL | Genes involved in AKT phosphorylates targets in the cytosol |
0.0 | 0.8 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 0.7 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.1 | 0.6 | REACTOME ACTIVATION OF BH3 ONLY PROTEINS | Genes involved in Activation of BH3-only proteins |
0.0 | 0.5 | REACTOME G2 M DNA DAMAGE CHECKPOINT | Genes involved in G2/M DNA damage checkpoint |
0.0 | 0.5 | REACTOME G0 AND EARLY G1 | Genes involved in G0 and Early G1 |
0.0 | 0.2 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |