PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
spi1a | dr11_v1_chr25_+_35553542_35553542 | -0.70 | 3.5e-02 | Click! |
spi1b | dr11_v1_chr7_-_32659345_32659353 | 0.70 | 3.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_24832038 Show fit | 1.86 |
ENSDART00000153731
|
si:dkey-79d12.5 |
|
chr4_-_17257435 Show fit | 1.64 |
ENSDART00000131973
|
lymphoid-restricted membrane protein |
|
chr15_+_12436220 Show fit | 1.50 |
ENSDART00000169894
|
transmembrane protease, serine 4a |
|
chr8_+_52442622 Show fit | 1.39 |
ENSDART00000012758
|
zgc:77112 |
|
chr1_+_27977297 Show fit | 1.30 |
ENSDART00000180692
ENSDART00000166819 |
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone |
|
chr15_+_12435975 Show fit | 1.27 |
ENSDART00000168011
|
transmembrane protease, serine 4a |
|
chr1_-_49521407 Show fit | 1.25 |
ENSDART00000189845
ENSDART00000143474 |
zona pellucida glycoprotein 3c |
|
chr20_+_54024559 Show fit | 1.21 |
ENSDART00000130767
|
si:dkey-241l7.4 |
|
chr22_+_26600834 Show fit | 1.16 |
ENSDART00000157411
|
adenylate cyclase 9 |
|
chr18_+_15937610 Show fit | 1.15 |
ENSDART00000061134
ENSDART00000154505 |
inositol 1,4,5-trisphosphate receptor, type 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.6 | GO:0018105 | peptidyl-serine phosphorylation(GO:0018105) |
0.1 | 3.1 | GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205) |
0.1 | 3.0 | GO:0010962 | regulation of glycogen biosynthetic process(GO:0005979) regulation of glucan biosynthetic process(GO:0010962) |
0.2 | 2.7 | GO:2000344 | binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344) |
0.0 | 2.3 | GO:0016579 | protein deubiquitination(GO:0016579) |
0.0 | 2.1 | GO:0030048 | actin filament-based movement(GO:0030048) |
0.0 | 2.0 | GO:0000209 | protein polyubiquitination(GO:0000209) |
0.0 | 1.8 | GO:0007528 | neuromuscular junction development(GO:0007528) |
0.0 | 1.8 | GO:0035383 | acyl-CoA metabolic process(GO:0006637) thioester metabolic process(GO:0035383) |
0.1 | 1.7 | GO:0036353 | histone H2A-K119 monoubiquitination(GO:0036353) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.8 | GO:0005769 | early endosome(GO:0005769) |
0.0 | 3.3 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.2 | 2.7 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.0 | 2.5 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.1 | 1.9 | GO:0035102 | PRC1 complex(GO:0035102) |
0.0 | 1.7 | GO:0030027 | lamellipodium(GO:0030027) |
0.1 | 1.6 | GO:0097431 | mitotic spindle pole(GO:0097431) |
0.1 | 1.6 | GO:0044453 | integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229) nuclear membrane part(GO:0044453) |
0.0 | 1.6 | GO:0031461 | cullin-RING ubiquitin ligase complex(GO:0031461) |
0.2 | 1.5 | GO:0032045 | guanyl-nucleotide exchange factor complex(GO:0032045) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.2 | GO:0030695 | GTPase regulator activity(GO:0030695) |
0.1 | 3.4 | GO:0005044 | scavenger receptor activity(GO:0005044) |
0.0 | 3.3 | GO:0004843 | thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005) |
0.1 | 3.2 | GO:0004629 | phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629) |
0.1 | 3.1 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.2 | 2.7 | GO:2001069 | glycogen binding(GO:2001069) |
0.2 | 2.7 | GO:0032190 | acrosin binding(GO:0032190) |
0.1 | 2.4 | GO:0031267 | small GTPase binding(GO:0031267) |
0.0 | 2.4 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.1 | 2.3 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.8 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 2.3 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 2.2 | PID AURORA B PATHWAY | Aurora B signaling |
0.2 | 2.1 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.1 | 2.1 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.1 | 1.8 | ST G ALPHA I PATHWAY | G alpha i Pathway |
0.0 | 1.7 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.2 | 1.6 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.1 | 1.4 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.1 | 1.4 | ST B CELL ANTIGEN RECEPTOR | B Cell Antigen Receptor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 2.3 | REACTOME POST NMDA RECEPTOR ACTIVATION EVENTS | Genes involved in Post NMDA receptor activation events |
0.1 | 2.2 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.1 | 1.9 | REACTOME N GLYCAN TRIMMING IN THE ER AND CALNEXIN CALRETICULIN CYCLE | Genes involved in N-glycan trimming in the ER and Calnexin/Calreticulin cycle |
0.0 | 1.8 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |
0.1 | 1.7 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |
0.0 | 1.7 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.1 | 1.4 | REACTOME TRAFFICKING OF AMPA RECEPTORS | Genes involved in Trafficking of AMPA receptors |
0.1 | 1.4 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.1 | 1.4 | REACTOME TRAF6 MEDIATED NFKB ACTIVATION | Genes involved in TRAF6 mediated NF-kB activation |