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PRJNA195909:zebrafish embryo and larva development

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Results for sox9a+sox9b

Z-value: 0.41

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Transcription factors associated with sox9a+sox9b

Gene Symbol Gene ID Gene Info
ENSDARG00000003293 SRY-box transcription factor 9a
ENSDARG00000043923 SRY-box transcription factor 9b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
sox9bdr11_v1_chr3_-_62527675_625276960.098.1e-01Click!
sox9adr11_v1_chr12_-_1951233_1951284-0.078.5e-01Click!

Activity profile of sox9a+sox9b motif

Sorted Z-values of sox9a+sox9b motif

Promoter Log-likelihood Transcript Gene Gene Info
chr9_-_22339582 0.47 ENSDART00000134805
crystallin, gamma M2d1
chr9_-_22318511 0.27 ENSDART00000129295
crystallin, gamma M2d2
chr25_+_31277415 0.26 ENSDART00000036275
troponin I type 2a (skeletal, fast), tandem duplicate 4
chr10_+_44042033 0.26 ENSDART00000190006
ENSDART00000046172
crystallin, beta A4
chr9_-_22240052 0.23 ENSDART00000111109
crystallin, gamma M2d9
chr15_+_19652807 0.22 ENSDART00000134321
ENSDART00000054426
lens intrinsic membrane protein 2.3
chr1_-_44434707 0.21 ENSDART00000110148
crystallin, beta A1, like 2
chr25_+_31276842 0.21 ENSDART00000187238
troponin I type 2a (skeletal, fast), tandem duplicate 4
chr9_-_22232902 0.21 ENSDART00000101845
crystallin, gamma M2d5
chr9_-_22245572 0.20 ENSDART00000114943
crystallin, gamma M2d4
chr5_-_30615901 0.20 ENSDART00000147769
si:ch211-117m20.5
chr9_-_22188117 0.19 ENSDART00000132890
crystallin, gamma M2d17
chr9_-_22023061 0.18 ENSDART00000101952
crystallin, gamma M2c
chr23_+_27068225 0.18 ENSDART00000054238
major intrinsic protein of lens fiber a
chr9_-_22069364 0.17 ENSDART00000101938
crystallin, gamma M2b
chr14_+_46313396 0.17 ENSDART00000047525
crystallin, beta A1, like 1
chr1_+_44442140 0.16 ENSDART00000190592
crystallin, beta B1, like 2
chr12_+_45677293 0.16 ENSDART00000152850
ENSDART00000153047
si:ch73-111m19.2
chr21_-_41870029 0.16 ENSDART00000182035
endonuclease, polyU-specific 2
chr3_+_32526263 0.16 ENSDART00000150897
si:ch73-367p23.2
chr25_+_20089986 0.15 ENSDART00000143441
ENSDART00000184073
troponin I4b, tandem duplicate 2
chr14_+_46313135 0.15 ENSDART00000172902
crystallin, beta A1, like 1
chr7_-_38658411 0.13 ENSDART00000109463
ENSDART00000017155
nephrosin
chr10_-_31782616 0.13 ENSDART00000128839
fasciculation and elongation protein zeta 1 (zygin I)
chr8_-_46897734 0.12 ENSDART00000138125
hes family bHLH transcription factor 2, tandem duplicate 2
chr8_+_15254564 0.12 ENSDART00000024433
solute carrier family 5 (sodium/sugar cotransporter), member 9
chr1_-_26026956 0.12 ENSDART00000102346
si:ch211-145b13.6
chr6_-_39764995 0.11 ENSDART00000085277
phosphofructokinase, muscle b
chr9_+_2002701 0.11 ENSDART00000082329
even-skipped homeobox 2
chr9_+_34641237 0.11 ENSDART00000133996
short stature homeobox
chr7_+_34227075 0.11 ENSDART00000052477
ENSDART00000173732
lactase-like a
chr21_-_35853245 0.10 ENSDART00000172245
sarcoglycan, delta (dystrophin-associated glycoprotein)
chr1_-_26027327 0.10 ENSDART00000171292
ENSDART00000170878
si:ch211-145b13.6
chr17_-_46457622 0.10 ENSDART00000130215
transmembrane protein 179
chr22_+_15507218 0.10 ENSDART00000125450
glypican 1a
chr24_-_21674950 0.09 ENSDART00000123216
ENSDART00000046211
ligand of numb-protein X 2a
chr6_+_12853655 0.08 ENSDART00000156341
family with sequence similarity 117, member Ba
chr3_+_18097700 0.08 ENSDART00000021634
info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a
chr2_+_56463167 0.08 ENSDART00000123392
RAB11B, member RAS oncogene family, b
chr24_-_2947393 0.08 ENSDART00000166661
ENSDART00000147110
tubulin, beta 6 class V
chr9_+_32978302 0.08 ENSDART00000007630
nescient helix loop helix 2
chr12_+_30788912 0.08 ENSDART00000160422
aldehyde dehydrogenase 18 family, member A1
chr15_+_45643787 0.08 ENSDART00000055995
ENSDART00000157750
S-antigen; retina and pineal gland (arrestin) b
chr6_+_29791164 0.08 ENSDART00000017424
prothymosin, alpha a
chr23_-_21463788 0.07 ENSDART00000079265
hairy-related 4, tandem duplicate 4
chr11_-_6048490 0.07 ENSDART00000066164
plasmalemma vesicle associated protein b
chr21_+_26390549 0.07 ENSDART00000185643
thymosin, beta
chr9_-_22057658 0.07 ENSDART00000101944
crystallin, gamma MX, like 1
chr1_-_35695614 0.07 ENSDART00000133813
ENSDART00000145291
ENSDART00000176451
si:dkey-27h10.2
chr1_+_37391716 0.07 ENSDART00000191986
SPARC-like 1
chr10_+_20113830 0.07 ENSDART00000139722
dematin actin binding protein
chr23_+_3587230 0.07 ENSDART00000055103
si:dkey-9l20.3
chr6_-_39765546 0.07 ENSDART00000185767
phosphofructokinase, muscle b
chr16_+_23398369 0.07 ENSDART00000037694
S100 calcium binding protein A10b
chr7_+_20467549 0.07 ENSDART00000173724
si:dkey-33c9.8
chr21_-_26089964 0.07 ENSDART00000027848
TLC domain containing 1
chr8_-_23081511 0.07 ENSDART00000142015
ENSDART00000135764
ENSDART00000147021
si:dkey-70p6.1
chr4_-_16334362 0.07 ENSDART00000101461
epiphycan
chr23_+_24789205 0.07 ENSDART00000088697
olfactomedin-like 3a
chr15_+_19797918 0.06 ENSDART00000113314
si:ch211-229d2.5
chr22_+_5106751 0.06 ENSDART00000138967
ataxia, cerebellar, Cayman type a
chr16_+_34523515 0.06 ENSDART00000041007
stathmin 1b
chr25_+_13406069 0.06 ENSDART00000010495
zinc and ring finger 1
chr5_+_38673168 0.06 ENSDART00000135267
si:dkey-58f10.12
chr8_+_25351863 0.06 ENSDART00000034092
deoxyribonuclease I-like 1-like
chr1_-_22691182 0.06 ENSDART00000076766
fibroblast growth factor binding protein 2b
chr4_+_16323970 0.06 ENSDART00000190651

chr16_-_48673938 0.06 ENSDART00000156969
notch homolog, like
chr19_+_47311869 0.06 ENSDART00000136647
exostoses (multiple) 1c
chr23_+_21459263 0.06 ENSDART00000104209
hairy-related 4, tandem duplicate 3
chr10_+_15255198 0.06 ENSDART00000139047
ENSDART00000172107
ENSDART00000183413
ENSDART00000185314
very low density lipoprotein receptor
chr3_+_24134418 0.06 ENSDART00000156204
si:ch211-246i5.5
chr23_+_3602779 0.06 ENSDART00000013629
si:dkey-9l20.3
chr10_+_36650222 0.06 ENSDART00000126963
uncoupling protein 3
chr12_+_33151246 0.06 ENSDART00000162681
RNA binding fox-1 homolog 3a
chr23_+_28648864 0.06 ENSDART00000189096
L1 cell adhesion molecule, paralog a
chr19_-_103289 0.06 ENSDART00000143118
adhesion G protein-coupled receptor B1b
chr23_-_17470146 0.06 ENSDART00000002398
tripartite motif containing 101
chr23_-_3681026 0.06 ENSDART00000192128
ENSDART00000040086
protein kinase C and casein kinase substrate in neurons 1a
chr8_-_18010735 0.05 ENSDART00000125014
acyl-CoA thioesterase 11b
chr19_+_41169996 0.05 ENSDART00000048438
ankyrin repeat and SOCS box containing 4
chr7_-_65236649 0.05 ENSDART00000185070
polycystic kidney disease 1 like 2a
chr22_-_10121880 0.05 ENSDART00000002348
retinol dehydrogenase 5 (11-cis/9-cis)
chr20_-_40451115 0.05 ENSDART00000075092
protein kinase (cAMP-dependent, catalytic) inhibitor beta
chr15_-_29586747 0.05 ENSDART00000076749
SAM domain, SH3 domain and nuclear localisation signals 1a
chr12_-_37449396 0.05 ENSDART00000152951
CDC42 effector protein (Rho GTPase binding) 4b
chr23_-_21453614 0.05 ENSDART00000079274
hairy-related 4, tandem duplicate 1
chr2_+_21634128 0.05 ENSDART00000089822
F-box and leucine-rich repeat protein 7
chr23_+_3598320 0.05 ENSDART00000189608
si:dkey-9l20.3
chr10_+_15255012 0.05 ENSDART00000023766
very low density lipoprotein receptor
chr4_+_76764315 0.05 ENSDART00000075598
membrane-spanning 4-domains, subfamily A, member 17A.12
chr5_-_22082918 0.05 ENSDART00000020908
zinc finger, C4H2 domain containing
chr13_-_35907768 0.05 ENSDART00000147522
MYCL proto-oncogene, bHLH transcription factor a
chr20_+_26880668 0.05 ENSDART00000077769
serpin peptidase inhibitor, clade B (ovalbumin), member 1
chr3_-_45778123 0.05 ENSDART00000146211
H3 histone, family 3B.1
chr6_-_43092175 0.05 ENSDART00000084389
leucine rich repeat neuronal 1
chr8_+_23093155 0.05 ENSDART00000063075
zgc:100920
chr14_+_38786298 0.05 ENSDART00000164440
si:ch211-195b11.3
chr4_-_4834617 0.05 ENSDART00000141539
cytochrome c oxidase assembly factor 6
chr25_-_13553055 0.05 ENSDART00000103831
ENSDART00000139290
anoctamin 10b
chr23_+_3594171 0.05 ENSDART00000159609
si:dkey-9l20.3
chr13_+_12739283 0.05 ENSDART00000102279
leucine rich repeat and Ig domain containing 2b
chr19_+_47311020 0.04 ENSDART00000138295
exostoses (multiple) 1c
chr23_-_31506854 0.04 ENSDART00000131352
ENSDART00000138625
ENSDART00000133002
EYA transcriptional coactivator and phosphatase 4
chr2_-_22286828 0.04 ENSDART00000168653
family with sequence similarity 110, member B
chr14_-_25949951 0.04 ENSDART00000141304
secreted protein, acidic, cysteine-rich (osteonectin)
chr8_+_44613135 0.04 ENSDART00000063392
LSM1, U6 small nuclear RNA associated
chr2_-_22230326 0.04 ENSDART00000127810
family with sequence similarity 110, member B
chr19_+_37620342 0.04 ENSDART00000158960
thrombospondin, type I, domain containing 7Aa
chr1_-_53988017 0.04 ENSDART00000003097
si:ch211-133l11.10
chr9_-_18742704 0.04 ENSDART00000145401
TSC22 domain family, member 1
chr5_-_41124241 0.04 ENSDART00000083561
myotubularin related protein 12
chr7_-_6468611 0.04 ENSDART00000147978
histone cluster 1 H2A family member 11
chr23_+_36130883 0.04 ENSDART00000103132
homeobox C4a
chr24_+_25069609 0.04 ENSDART00000115165
APC membrane recruitment protein 2
chr11_-_29657947 0.04 ENSDART00000125753
ribosomal protein L22
chr23_-_7799184 0.04 ENSDART00000190946
ENSDART00000165427
myelin transcription factor 1b
chr9_+_21148318 0.04 ENSDART00000035428
hydroxyacid oxidase 2 (long chain)
chr24_+_26932472 0.04 ENSDART00000192288
ENSDART00000079848
TNF superfamily member 10
chr16_-_16590780 0.04 ENSDART00000059841
si:ch211-257p13.3
chr7_+_25036188 0.04 ENSDART00000163957
ENSDART00000169749
sb:cb1058
chr5_-_23999777 0.04 ENSDART00000085969
MAP7 domain containing 2a
chr11_+_14286160 0.04 ENSDART00000166236
si:ch211-262i1.3
chr10_+_35439952 0.04 ENSDART00000006284
HERV-H LTR-associating 2a, tandem duplicate 2
chr14_-_44841335 0.04 ENSDART00000173011
si:dkey-109l4.6
chr16_+_37582872 0.04 ENSDART00000169331
adhesion G protein-coupled receptor B1a
chr23_+_2669 0.04 ENSDART00000011146
twist3
chr7_-_58098814 0.04 ENSDART00000147287
ENSDART00000043984
ankyrin 2b, neuronal
chr17_+_18117029 0.04 ENSDART00000154646
ENSDART00000179739
B cell CLL/lymphoma 11Ba
chr6_+_54358529 0.04 ENSDART00000153704
ankyrin repeat and sterile alpha motif domain containing 1Ab
chr6_-_50204262 0.04 ENSDART00000163648
RALY heterogeneous nuclear ribonucleoprotein
chr8_+_28695914 0.04 ENSDART00000033386
osteoclast stimulatory transmembrane protein
chr5_-_17601759 0.04 ENSDART00000138387
si:ch211-130h14.6
chr23_+_35708730 0.04 ENSDART00000009277
tubulin, alpha 1a
chr24_-_7699356 0.04 ENSDART00000013117
synaptotagmin Vb
chr2_-_51634431 0.04 ENSDART00000165568
polymeric immunoglobulin receptor
chr11_-_27057572 0.04 ENSDART00000043091
IQ motif and Sec7 domain 1b
chr4_+_14660769 0.04 ENSDART00000168152
ENSDART00000013990
ENSDART00000079987
ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr19_-_41472228 0.04 ENSDART00000113388
distal-less homeobox 5a
chr25_+_35502552 0.04 ENSDART00000189612
ENSDART00000058443
fin bud initiation factor a
chr12_+_16281312 0.04 ENSDART00000152500
protein phosphatase 1, regulatory subunit 3Cb
chr4_+_28418829 0.04 ENSDART00000111603
zinc finger protein 1041
chr10_-_342564 0.04 ENSDART00000157633
vasodilator stimulated phosphoprotein a
chr7_-_68373495 0.04 ENSDART00000167440
zinc finger homeobox 3
chr21_-_39327223 0.04 ENSDART00000115097
apoptosis-inducing factor, mitochondrion-associated, 5
chr7_-_69636502 0.04 ENSDART00000126739
tetraspanin 5a
chr23_+_28077953 0.04 ENSDART00000186122
ENSDART00000111570
solute carrier family 26, member 10
chr18_+_31280984 0.04 ENSDART00000170285
ENSDART00000150608
ENSDART00000159720
differentially expressed in FDCP 8 homolog (mouse)
chr10_+_38000061 0.03 ENSDART00000141731
WSC domain containing 1b
chr2_-_5942115 0.03 ENSDART00000154489
transmembrane protein 125b
chr14_-_31893996 0.03 ENSDART00000173222
G protein-coupled receptor 101
chr22_+_661711 0.03 ENSDART00000113795
E74-like factor 3 (ets domain transcription factor, epithelial-specific )
chr15_+_25439106 0.03 ENSDART00000156252
apoptosis-inducing factor, mitochondrion-associated, 4
chr17_+_44780166 0.03 ENSDART00000156260
transmembrane protein 63C
chr11_+_24957858 0.03 ENSDART00000145647
sulfatase 2a
chr4_+_25704579 0.03 ENSDART00000066945
laminin, beta 1b
chr23_+_3585251 0.03 ENSDART00000187356
si:dkey-9l20.3
chr18_+_12655766 0.03 ENSDART00000144246
thromboxane A synthase 1 (platelet)
chr25_+_22683640 0.03 ENSDART00000131993
Usher syndrome 1C
chr8_-_410199 0.03 ENSDART00000091177
ENSDART00000122979
ENSDART00000151331
ENSDART00000151155
tripartite motif containing 36
chr9_+_17348745 0.03 ENSDART00000147488
SLAIN motif family, member 1a
chr13_+_22480857 0.03 ENSDART00000078721
ENSDART00000044719
ENSDART00000130957
ENSDART00000078757
ENSDART00000130424
ENSDART00000078747
LIM domain binding 3a
chr13_+_281214 0.03 ENSDART00000137572
mitochondrial pyruvate carrier 1
chr15_-_28094256 0.03 ENSDART00000142041
ENSDART00000132153
ENSDART00000146657
ENSDART00000048720
crystallin, beta A1a
chr10_+_36026576 0.03 ENSDART00000193786
high mobility group box 1a
chr25_-_20258508 0.03 ENSDART00000133860
ENSDART00000006840
ENSDART00000173434
dynamin 1-like
chr14_-_3180841 0.03 ENSDART00000184370
ENSDART00000183810
colony stimulating factor 1 receptor, a
chr23_-_17429775 0.03 ENSDART00000043076
pancreatic progenitor cell differentiation and proliferation factor b
chr5_+_20103085 0.03 ENSDART00000079424
si:rp71-1c23.3
chr15_-_31419805 0.03 ENSDART00000060111
odorant receptor, family D, subfamily 111, member 11
chr6_-_48082525 0.03 ENSDART00000192049
solute carrier family 2 (facilitated glucose transporter), member 1b
chr19_-_34011340 0.03 ENSDART00000172618
engulfment and cell motility 1 (ced-12 homolog, C. elegans)
chr13_+_24750078 0.03 ENSDART00000021053
collagen, type XVII, alpha 1b
chr17_+_18117358 0.03 ENSDART00000144894
B cell CLL/lymphoma 11Ba
chr20_+_54383838 0.03 ENSDART00000157737
leucine rich repeat and fibronectin type III domain containing 5b
chr11_-_13618412 0.03 ENSDART00000137289
secreted immunoglobulin domain 1
chr20_-_13722514 0.03 ENSDART00000152458
si:ch211-122h15.4
chr2_+_20539402 0.03 ENSDART00000129585
si:ch73-14h1.2
chr7_-_17779644 0.03 ENSDART00000128504
si:dkey-106g10.7
chr2_-_33645411 0.03 ENSDART00000114663
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
chr6_-_54826061 0.03 ENSDART00000149982
troponin I type 1b (skeletal, slow)
chr16_-_9694822 0.03 ENSDART00000168748
si:ch211-93i7.4
chr19_+_342094 0.03 ENSDART00000151013
ENSDART00000187622
endosulfine alpha a
chr4_-_44872722 0.03 ENSDART00000150621

chr9_+_35876927 0.03 ENSDART00000138834
mab-21-like 3
chr1_+_38776294 0.03 ENSDART00000170546
WD repeat domain 17
chr25_+_35064642 0.03 ENSDART00000186079
histone cluster 1 H2A family member 2
chr24_-_36727922 0.03 ENSDART00000135142
si:ch73-334d15.1
chr13_+_22480496 0.03 ENSDART00000136863
ENSDART00000131870
ENSDART00000078720
ENSDART00000078740
ENSDART00000139218
LIM domain binding 3a
chr1_-_46981134 0.03 ENSDART00000130607
pbx/knotted 1 homeobox 1.2
chr1_+_46493944 0.03 ENSDART00000114083
mcf.2 cell line derived transforming sequence-like a
chr17_+_41343167 0.03 ENSDART00000156405
molybdenum cofactor synthesis 1
chr25_-_8916913 0.03 ENSDART00000104629
ENSDART00000131748
furin (paired basic amino acid cleaving enzyme) b
chr1_-_462165 0.03 ENSDART00000152799
si:ch73-244f7.3
chr1_-_40994259 0.03 ENSDART00000101562
adrenoceptor alpha 2C
chr7_-_17028015 0.03 ENSDART00000022441
developing brain homeobox 1a
chr9_-_41784799 0.03 ENSDART00000144573
ENSDART00000112542
ENSDART00000190486
obscurin-like 1b
chr23_+_37482727 0.03 ENSDART00000162737
agmatine ureohydrolase (agmatinase)
chr8_-_21103522 0.03 ENSDART00000100283
aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1
chr4_-_56898328 0.03 ENSDART00000169189
si:dkey-269o24.6

Network of associatons between targets according to the STRING database.

First level regulatory network of sox9a+sox9b

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 3.0 GO:0002088 lens development in camera-type eye(GO:0002088)
0.0 0.2 GO:0018120 peptidyl-arginine ADP-ribosylation(GO:0018120)
0.0 0.1 GO:0043152 induction of bacterial agglutination(GO:0043152)
0.0 0.1 GO:0055091 phospholipid homeostasis(GO:0055091)
0.0 0.2 GO:0006007 glucose catabolic process(GO:0006007) NADH regeneration(GO:0006735) glycolytic process through fructose-6-phosphate(GO:0061615) glycolytic process through glucose-6-phosphate(GO:0061620) canonical glycolysis(GO:0061621) glucose catabolic process to pyruvate(GO:0061718)
0.0 0.1 GO:0090386 phagosome maturation involved in apoptotic cell clearance(GO:0090386) phagolysosome assembly involved in apoptotic cell clearance(GO:0090387)
0.0 0.6 GO:0003009 skeletal muscle contraction(GO:0003009)
0.0 0.1 GO:0021521 ventral spinal cord interneuron specification(GO:0021521) cell fate specification involved in pattern specification(GO:0060573)
0.0 0.0 GO:1904251 regulation of bile acid biosynthetic process(GO:0070857) regulation of bile acid metabolic process(GO:1904251)
0.0 0.1 GO:0021627 olfactory nerve development(GO:0021553) olfactory nerve morphogenesis(GO:0021627) olfactory nerve formation(GO:0021628)
0.0 0.0 GO:0003322 pancreatic A cell development(GO:0003322)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0005945 6-phosphofructokinase complex(GO:0005945)
0.0 0.6 GO:0005861 troponin complex(GO:0005861)
0.0 0.1 GO:0016012 sarcoglycan complex(GO:0016012)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 3.0 GO:0005212 structural constituent of eye lens(GO:0005212)
0.0 0.1 GO:0030228 lipoprotein particle receptor activity(GO:0030228)
0.0 0.1 GO:0050508 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity(GO:0050508)
0.0 0.2 GO:0003956 NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956)
0.0 0.1 GO:0005412 glucose:sodium symporter activity(GO:0005412)
0.0 0.2 GO:0015250 water channel activity(GO:0015250)
0.0 0.2 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.1 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0 0.1 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.1 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.1 GO:0016316 phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316)