PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
six4b | dr11_v1_chr20_+_20484827_20484827 | -0.91 | 5.8e-04 | Click! |
six4a | dr11_v1_chr13_-_31647323_31647323 | -0.86 | 2.8e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_13472234 Show fit | 1.74 |
ENSDART00000114069
ENSDART00000132406 |
cyclin and CBS domain divalent metal cation transport mediator 4b |
|
chr22_+_25242322 Show fit | 1.52 |
ENSDART00000134628
|
si:ch211-226h8.8 |
|
chr22_+_25236888 Show fit | 1.47 |
ENSDART00000037286
|
zgc:172218 |
|
chr15_-_35126332 Show fit | 1.45 |
ENSDART00000007636
|
zgc:55413 |
|
chr9_+_8396755 Show fit | 1.31 |
ENSDART00000043067
|
zgc:171776 |
|
chr22_+_25236657 Show fit | 1.28 |
ENSDART00000138012
|
zgc:172218 |
|
chr1_-_6085750 Show fit | 1.18 |
ENSDART00000138891
|
si:ch1073-345a8.1 |
|
chr7_-_54217547 Show fit | 1.15 |
ENSDART00000162777
ENSDART00000188268 ENSDART00000165875 |
casein kinase 1, gamma 1 |
|
chr18_+_27511976 Show fit | 1.12 |
ENSDART00000132017
ENSDART00000140781 |
tumor protein p53 inducible protein 11b |
|
chr25_+_5604512 Show fit | 1.09 |
ENSDART00000042781
|
plexin b2b |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.7 | GO:0010960 | magnesium ion homeostasis(GO:0010960) |
0.0 | 1.2 | GO:0090263 | positive regulation of canonical Wnt signaling pathway(GO:0090263) |
0.2 | 1.1 | GO:0032776 | DNA methylation on cytosine(GO:0032776) |
0.1 | 1.1 | GO:1902285 | semaphorin-plexin signaling pathway involved in neuron projection guidance(GO:1902285) semaphorin-plexin signaling pathway involved in axon guidance(GO:1902287) |
0.0 | 1.0 | GO:0032007 | insulin receptor signaling pathway(GO:0008286) negative regulation of TOR signaling(GO:0032007) |
0.0 | 0.9 | GO:0009648 | photoperiodism(GO:0009648) |
0.3 | 0.8 | GO:1903373 | regulation of endoplasmic reticulum tubular network organization(GO:1903371) positive regulation of endoplasmic reticulum tubular network organization(GO:1903373) |
0.0 | 0.8 | GO:0090279 | regulation of calcium ion import(GO:0090279) |
0.0 | 0.8 | GO:0006828 | manganese ion transport(GO:0006828) |
0.0 | 0.7 | GO:0043252 | sodium-independent organic anion transport(GO:0043252) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | GO:0002116 | semaphorin receptor complex(GO:0002116) |
0.3 | 0.8 | GO:0098826 | endoplasmic reticulum tubular network membrane(GO:0098826) |
0.0 | 0.7 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.0 | 0.6 | GO:0070971 | endoplasmic reticulum exit site(GO:0070971) |
0.1 | 0.5 | GO:0005968 | Rab-protein geranylgeranyltransferase complex(GO:0005968) |
0.1 | 0.5 | GO:1990513 | CLOCK-BMAL transcription complex(GO:1990513) |
0.1 | 0.4 | GO:0000941 | condensed nuclear chromosome inner kinetochore(GO:0000941) |
0.1 | 0.4 | GO:1990111 | spermatoproteasome complex(GO:1990111) |
0.0 | 0.4 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.0 | 0.4 | GO:0044224 | juxtaparanode region of axon(GO:0044224) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.0 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.1 | 1.1 | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity(GO:0003886) |
0.0 | 1.0 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.0 | 0.9 | GO:0015095 | magnesium ion transmembrane transporter activity(GO:0015095) |
0.0 | 0.9 | GO:0005347 | ATP transmembrane transporter activity(GO:0005347) |
0.0 | 0.8 | GO:0015279 | store-operated calcium channel activity(GO:0015279) |
0.0 | 0.8 | GO:0004629 | phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629) |
0.0 | 0.8 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.0 | 0.7 | GO:0015347 | sodium-independent organic anion transmembrane transporter activity(GO:0015347) |
0.1 | 0.6 | GO:0015183 | L-aspartate transmembrane transporter activity(GO:0015183) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 1.1 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 1.0 | ST G ALPHA I PATHWAY | G alpha i Pathway |
0.0 | 0.8 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.0 | 0.7 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 0.3 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.1 | 0.8 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.1 | 0.6 | REACTOME TRANSPORT OF ORGANIC ANIONS | Genes involved in Transport of organic anions |
0.0 | 0.6 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.0 | 0.5 | REACTOME N GLYCAN ANTENNAE ELONGATION | Genes involved in N-Glycan antennae elongation |
0.0 | 0.4 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.0 | 0.3 | REACTOME RNA POL I TRANSCRIPTION TERMINATION | Genes involved in RNA Polymerase I Transcription Termination |
0.0 | 0.2 | REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE | Genes involved in mRNA Decay by 3' to 5' Exoribonuclease |