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PRJNA195909:zebrafish embryo and larva development

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Results for rorc

Z-value: 0.54

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Transcription factors associated with rorc

Gene Symbol Gene ID Gene Info
ENSDARG00000087195 RAR-related orphan receptor C

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rorcdr11_v1_chr16_+_17913936_179139450.088.4e-01Click!

Activity profile of rorc motif

Sorted Z-values of rorc motif

Promoter Log-likelihood Transcript Gene Gene Info
chr19_+_43314700 0.44 ENSDART00000049045
ENSDART00000133158
matrilin 1
chr5_+_70155935 0.23 ENSDART00000165570
regulator of G protein signaling 3a
chr8_+_30452945 0.23 ENSDART00000062303
forkhead box D5
chr16_+_26738404 0.22 ENSDART00000163110
fibrinogen silencer binding protein
chr15_+_19682013 0.22 ENSDART00000127368
si:dkey-4p15.5
chr18_+_7594012 0.19 ENSDART00000062150
zgc:77752
chr15_+_19681718 0.18 ENSDART00000164803
si:dkey-4p15.5
chr7_+_48675347 0.17 ENSDART00000157917
ENSDART00000185580
transient receptor potential cation channel, subfamily M, member 5
chr19_+_42336523 0.13 ENSDART00000151304
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr15_-_43625549 0.13 ENSDART00000168589
cathepsin C
chr15_+_42599501 0.13 ENSDART00000177646
glutamate receptor, ionotropic, kainate 1b
chr11_-_1948784 0.13 ENSDART00000082475
nuclear receptor subfamily 1, group D, member 4b
chr10_+_2232023 0.12 ENSDART00000097695
contactin associated protein like 3
chr15_-_37829160 0.12 ENSDART00000099425
chymotrypsin-like
chr10_+_26935155 0.12 ENSDART00000129993

chr17_-_13072334 0.11 ENSDART00000159598

chr1_+_19433004 0.11 ENSDART00000133959
clock circadian regulator b
chr7_-_22632518 0.11 ENSDART00000161046
si:dkey-112a7.4
chr19_+_30990815 0.10 ENSDART00000134645
syncoilin, intermediate filament protein
chr2_+_27867830 0.10 ENSDART00000128193
ring finger protein 152
chr22_-_13544244 0.10 ENSDART00000110136
contactin associated protein-like 5b
chr3_-_26191960 0.10 ENSDART00000113843
yippee-like 3
chr13_+_29470442 0.09 ENSDART00000028417
leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
chr19_+_24896409 0.09 ENSDART00000049840
EYA transcriptional coactivator and phosphatase 3
chr7_-_22632938 0.09 ENSDART00000159867
ENSDART00000165706
si:dkey-112a7.4
chr21_+_27189490 0.09 ENSDART00000125349
BCL2 associated agonist of cell death a
chr5_+_2815021 0.09 ENSDART00000020472
4-hydroxyphenylpyruvate dioxygenase a
chr17_+_2214283 0.09 ENSDART00000189187
p21 protein (Cdc42/Rac)-activated kinase 6a
chr2_+_28889936 0.09 ENSDART00000078232
cadherin 10, type 2a (T2-cadherin)
chr12_-_7234915 0.09 ENSDART00000048866
inositol polyphosphate multikinase b
chr12_+_31616412 0.08 ENSDART00000124439
carboxypeptidase N, polypeptide 1
chr4_+_17280868 0.08 ENSDART00000145349
branched chain amino-acid transaminase 1, cytosolic
chr18_-_42313798 0.08 ENSDART00000098639
contactin 5
chr11_-_24458786 0.08 ENSDART00000089713
matrix-remodelling associated 8a
chr11_-_42396302 0.08 ENSDART00000165624
sarcolemma associated protein a
chr8_+_42917515 0.08 ENSDART00000021715
solute carrier family 23 (ascorbic acid transporter), member 2
chr23_+_44741500 0.08 ENSDART00000166421
ATPase Na+/K+ transporting subunit beta 2a
chr7_+_24573721 0.08 ENSDART00000173938
ENSDART00000173681
si:dkeyp-75h12.7
chr5_+_19413838 0.07 ENSDART00000089014
ENSDART00000146215
myosin IHa
chr14_+_17376940 0.07 ENSDART00000054590
ENSDART00000010148
spondin 2b, extracellular matrix protein
chr3_+_60761811 0.07 ENSDART00000053482
TSEN54 tRNA splicing endonuclease subunit
chr5_-_16983336 0.07 ENSDART00000038740
polypeptide N-acetylgalactosaminyltransferase 9
chr22_-_18546241 0.07 ENSDART00000105404
ENSDART00000105405
cold inducible RNA binding protein b
chr9_+_13682133 0.07 ENSDART00000175639
membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4)
chr19_+_30990129 0.07 ENSDART00000052169
ENSDART00000193376
syncoilin, intermediate filament protein
chr16_+_16266428 0.07 ENSDART00000188433
SET domain containing 2
chr14_-_42997145 0.07 ENSDART00000172801
protocadherin 10b
chr19_-_8604429 0.06 ENSDART00000151165
tripartite motif containing 46b
chr17_-_37312922 0.06 ENSDART00000153555
si:ch211-180n24.3
chr5_-_11573490 0.06 ENSDART00000109577

chr8_+_25351863 0.06 ENSDART00000034092
deoxyribonuclease I-like 1-like
chr10_+_575929 0.06 ENSDART00000129856
SMAD family member 4a
chr15_-_31419805 0.06 ENSDART00000060111
odorant receptor, family D, subfamily 111, member 11
chr10_+_15454745 0.05 ENSDART00000129441
ENSDART00000123935
ENSDART00000163446
ENSDART00000087680
ENSDART00000193752
erbb2 interacting protein
chr3_-_5555500 0.05 ENSDART00000176133
ENSDART00000057464
tripartite motif containing 35-31
chr7_+_65240227 0.05 ENSDART00000168287
beta-carotene oxygenase 1, like
chr2_+_32743807 0.05 ENSDART00000022909
kelch-like family member 18
chr6_+_13742899 0.05 ENSDART00000104722
cyclin-dependent kinase 5, regulatory subunit 2a (p39)
chr23_+_19564392 0.05 ENSDART00000144746
ATPase H+ transporting accessory protein 1 like b
chr7_+_19835569 0.05 ENSDART00000149812
ovo-like zinc finger 1a
chr2_+_49417900 0.05 ENSDART00000122742
ENSDART00000160783
RAR-related orphan receptor C b
chr2_-_38337122 0.05 ENSDART00000076523
ENSDART00000187473
solute carrier family 7 (amino acid transporter light chain, L system), member 8b
chr8_+_25352268 0.05 ENSDART00000187829
deoxyribonuclease I-like 1-like
chr25_-_19219807 0.05 ENSDART00000183577
aggrecan b
chr2_-_56649883 0.05 ENSDART00000191786
glutathione peroxidase 4b
chr23_-_36724575 0.05 ENSDART00000159560
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr7_+_22313533 0.05 ENSDART00000123457
si:dkey-11f12.2
chr16_+_12632428 0.05 ENSDART00000184600
ENSDART00000180537
N-acetyltransferase 14 (GCN5-related, putative)
chr7_-_28058442 0.05 ENSDART00000173842
si:ch211-235p24.2
chr19_-_8096984 0.05 ENSDART00000146987
si:dkey-266f7.9
chr8_+_15277874 0.05 ENSDART00000146965
deoxynucleotidyltransferase, terminal, interacting protein 2
chr10_+_44692272 0.05 ENSDART00000157458
ubiquitin C
chr15_-_34322915 0.05 ENSDART00000190543
ENSDART00000019651
ENSDART00000193601
diacylglycerol kinase, beta
chr8_+_3649036 0.05 ENSDART00000033152
RAB35, member RAS oncogene family b
chr12_-_32013125 0.05 ENSDART00000153355
glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb
chr11_+_30672282 0.04 ENSDART00000023981
ENSDART00000188846
tau tubulin kinase 1a
chr8_-_51349429 0.04 ENSDART00000134043
ENSDART00000098282
si:ch211-198o12.4
chr9_-_43207768 0.04 ENSDART00000192523
SEC14 and spectrin domains 1
chr11_+_26363435 0.04 ENSDART00000088800
phosphopantothenoylcysteine synthetase
chr14_-_25111496 0.04 ENSDART00000158108
si:rp71-1d10.8
chr25_+_3035384 0.04 ENSDART00000184219
ENSDART00000149360
mannose phosphate isomerase
chr1_+_9708801 0.04 ENSDART00000189621
extracellular leucine-rich repeat and fibronectin type III domain containing 1b
chr15_+_1766734 0.04 ENSDART00000168250
cullin 3b
chr8_+_18463797 0.04 ENSDART00000148958
ALK and LTK ligand 1
chr8_+_14890821 0.03 ENSDART00000190966
sterol O-acyltransferase 1
chr25_-_37227491 0.03 ENSDART00000156647
golgi glycoprotein 1a
chr3_+_13637383 0.03 ENSDART00000166000
si:ch211-194b1.1
chr8_+_26034623 0.03 ENSDART00000004521
ENSDART00000142555
ariadne homolog 2 (Drosophila)
chr22_-_621609 0.03 ENSDART00000137264
ENSDART00000106636
serine/arginine-rich splicing factor 3b
chr8_-_29706882 0.03 ENSDART00000045909
perforin 1.5
chr16_+_11242443 0.03 ENSDART00000024935
glycogen synthase kinase 3 alpha b
chr24_+_24809877 0.03 ENSDART00000185117
DnaJ (Hsp40) homolog, subfamily C, member 5 beta
chr15_-_25304710 0.03 ENSDART00000190690
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a
chr3_-_31226841 0.03 ENSDART00000085903
synaptotagmin XVII
chr15_-_34878388 0.02 ENSDART00000154094
mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a
chr22_-_38480186 0.02 ENSDART00000171704
heme-binding protein soul4
chr17_-_6738538 0.02 ENSDART00000157125
visinin-like 1b
chr4_+_38103421 0.02 ENSDART00000164164
zinc finger protein 1016
chr16_+_16265850 0.02 ENSDART00000181265
SET domain containing 2
chr9_+_21993092 0.02 ENSDART00000059693
crystallin, gamma M7
chr15_+_17100697 0.02 ENSDART00000183565
ENSDART00000123197
v-rel avian reticuloendotheliosis viral oncogene homolog B
chr20_-_14680897 0.02 ENSDART00000063857
ENSDART00000161314
secernin 2
chr22_-_6420239 0.02 ENSDART00000148385
zgc:171699
chr2_+_49864219 0.02 ENSDART00000187744
ribosomal protein L37
chr5_-_69523816 0.02 ENSDART00000112692
si:ch211-157p22.10
chr5_-_30079434 0.02 ENSDART00000133981
beta-carotene oxygenase 2a
chr8_-_25771474 0.02 ENSDART00000193883
suppressor of variegation 3-9 homolog 1b
chr9_+_35876927 0.02 ENSDART00000138834
mab-21-like 3
chr1_+_17527931 0.02 ENSDART00000131927
caspase 3, apoptosis-related cysteine peptidase a
chr10_+_40548616 0.02 ENSDART00000147894
si:ch211-238p8.10
chr1_-_21714025 0.02 ENSDART00000129066
zinc finger, CCHC domain containing 7
chr1_-_33353778 0.02 ENSDART00000041191
glycogenin 2
chr11_+_19159083 0.02 ENSDART00000138964
ADAM metallopeptidase with thrombospondin type 1 motif, 9
chr11_-_39118882 0.02 ENSDART00000113185
ENSDART00000156526
adaptor-related protein complex 5, beta 1 subunit
chr22_+_26263290 0.02 ENSDART00000184840

chr15_-_2841677 0.02 ENSDART00000026145
ENSDART00000180290
angiomotin like 1
chr14_-_22390821 0.02 ENSDART00000054396
F-box and leucine-rich repeat protein 3, like
chr17_-_2126517 0.02 ENSDART00000013093
zinc finger, FYVE domain containing 19
chr25_+_11389220 0.01 ENSDART00000187787
si:ch73-141f14.1
chr24_-_35707552 0.01 ENSDART00000165199
microtubule-associated protein, RP/EB family, member 2
chr12_+_30789611 0.01 ENSDART00000181501
aldehyde dehydrogenase 18 family, member A1
chr13_-_1130096 0.01 ENSDART00000010261
partner of NOB1 homolog
chr22_+_8612462 0.01 ENSDART00000114586

chr6_-_8244474 0.01 ENSDART00000151358
ral guanine nucleotide dissociation stimulator-like 3a
chr1_+_15204633 0.01 ENSDART00000188410
intelectin 1
chr22_-_834106 0.01 ENSDART00000105873
cryptochrome circadian clock 4
chr8_+_43340995 0.01 ENSDART00000038566
refilin A
chr17_-_31044803 0.01 ENSDART00000185941
ENSDART00000152016
echinoderm microtubule associated protein like 1
chr16_+_30438041 0.01 ENSDART00000137977
platelet endothelial aggregation receptor 1
chr16_-_30564319 0.01 ENSDART00000145087
lamin A
chr21_+_41649336 0.01 ENSDART00000164694
ENSDART00000181539
protein phosphatase 2, regulatory subunit B, beta b
chr2_-_56655769 0.01 ENSDART00000113589
glutathione peroxidase 4b
chr3_+_32698424 0.01 ENSDART00000055340
FUS RNA binding protein
chr6_-_43005901 0.01 ENSDART00000161071
si:ch73-361p23.3
chr9_+_29548195 0.01 ENSDART00000176057
ring finger protein 17
chr25_-_19374710 0.01 ENSDART00000184483
ENSDART00000188706
microtubule-associated protein 1Ab
chr11_-_3574311 0.01 ENSDART00000167064
si:dkey-33m11.7
chr1_+_56447107 0.01 ENSDART00000091924

chr8_-_2602572 0.01 ENSDART00000110482
zinc finger, DHHC-type containing 12a
chr11_+_28476298 0.01 ENSDART00000122319
leucine rich repeat containing 38b
chr12_+_16106459 0.01 ENSDART00000114174
mucin 13b, cell surface associated
chr16_-_47426482 0.01 ENSDART00000148631
ENSDART00000149723
septin 7b
chr21_-_40557281 0.01 ENSDART00000172327
TAO kinase 1b
chr10_-_39321367 0.00 ENSDART00000129647
somatolactin beta
chr16_-_24561354 0.00 ENSDART00000193278
ENSDART00000126274
si:ch211-79k12.2
chr1_+_8521323 0.00 ENSDART00000121439
ENSDART00000103626
ENSDART00000141283
mitochondrial elongation factor 2
chr25_-_32888115 0.00 ENSDART00000087586
C2 calcium dependent domain containing 4A
chr9_-_48937089 0.00 ENSDART00000193442
ceramide synthase 6
chr1_-_12393060 0.00 ENSDART00000079782
sodium channel and clathrin linker 1
chr1_-_21287724 0.00 ENSDART00000193900
neuropeptide Y receptor Y1
chr2_-_8648440 0.00 ENSDART00000135743
si:ch211-71m22.3
chr25_-_17918536 0.00 ENSDART00000148660
aryl hydrocarbon receptor nuclear translocator-like 1a

Network of associatons between targets according to the STRING database.

First level regulatory network of rorc

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0008591 regulation of Wnt signaling pathway, calcium modulating pathway(GO:0008591) negative regulation of non-canonical Wnt signaling pathway(GO:2000051)
0.0 0.1 GO:0015882 L-ascorbic acid transport(GO:0015882) L-ascorbic acid metabolic process(GO:0019852)
0.0 0.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.0 0.1 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.2 GO:0050909 sensory perception of taste(GO:0050909)
0.0 0.1 GO:0006572 tyrosine catabolic process(GO:0006572)
0.0 0.1 GO:0097198 histone H3-K36 trimethylation(GO:0097198)
0.0 0.2 GO:0032525 somite rostral/caudal axis specification(GO:0032525)
0.0 0.0 GO:0042546 cell wall biogenesis(GO:0042546) cell wall macromolecule biosynthetic process(GO:0044038) cellular component macromolecule biosynthetic process(GO:0070589)
0.0 0.1 GO:2001240 histone dephosphorylation(GO:0016576) negative regulation of signal transduction in absence of ligand(GO:1901099) regulation of extrinsic apoptotic signaling pathway in absence of ligand(GO:2001239) negative regulation of extrinsic apoptotic signaling pathway in absence of ligand(GO:2001240)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990513 CLOCK-BMAL transcription complex(GO:1990513)
0.0 0.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.0 0.1 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.1 GO:0016533 cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0008427 calcium-dependent protein kinase inhibitor activity(GO:0008427) calcium-dependent protein kinase regulator activity(GO:0010858)
0.0 0.1 GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity(GO:0003868)
0.0 0.1 GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440)
0.0 0.1 GO:0052655 branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 0.1 GO:0005176 ErbB-2 class receptor binding(GO:0005176)
0.0 0.1 GO:0070888 E-box binding(GO:0070888)
0.0 0.0 GO:0033130 acetylcholine receptor binding(GO:0033130)
0.0 0.1 GO:0047066 phospholipid-hydroperoxide glutathione peroxidase activity(GO:0047066)
0.0 0.1 GO:0004530 deoxyribonuclease I activity(GO:0004530)