PRJNA195909:zebrafish embryo and larva development
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSDARG00000001910 | RAR-related orphan receptor A, paralog b | |
ENSDARG00000031768 | RAR-related orphan receptor A, paralog a | |
ENSDARG00000109324 | RAR-related orphan receptor A, paralog b | |
ENSDARG00000113275 | RAR-related orphan receptor A, paralog b |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
rorab | dr11_v1_chr7_-_29571615_29571615 | 0.73 | 2.5e-02 | Click! |
roraa | dr11_v1_chr25_+_33939728_33939728 | 0.47 | 2.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_29900546 Show fit | 1.63 |
ENSDART00000147441
|
lens intrinsic membrane protein 2.1 |
|
chr11_+_30729745 Show fit | 1.55 |
ENSDART00000103270
|
solute carrier family 22 (organic anion transporter), member 7a |
|
chr23_+_44741500 Show fit | 1.30 |
ENSDART00000166421
|
ATPase Na+/K+ transporting subunit beta 2a |
|
chr21_+_7582036 Show fit | 1.28 |
ENSDART00000135485
ENSDART00000027268 |
orthopedia homeobox a |
|
chr21_+_20771082 Show fit | 1.15 |
ENSDART00000079732
|
3-oxoacid CoA transferase 1b |
|
chr1_+_12763920 Show fit | 1.12 |
ENSDART00000189465
|
protocadherin 10a |
|
chr19_-_5332784 Show fit | 1.12 |
ENSDART00000010373
|
keratin, type 1, gene 19d |
|
chr23_-_24488696 Show fit | 1.10 |
ENSDART00000155593
|
transmembrane protein 82 |
|
chr20_+_16750177 Show fit | 1.09 |
ENSDART00000185357
|
calmodulin 1b |
|
chr6_+_3710865 Show fit | 1.04 |
ENSDART00000170781
|
phosphatase, orphan 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.7 | GO:0061615 | glucose catabolic process(GO:0006007) NADH regeneration(GO:0006735) glycolytic process through fructose-6-phosphate(GO:0061615) glycolytic process through glucose-6-phosphate(GO:0061620) canonical glycolysis(GO:0061621) glucose catabolic process to pyruvate(GO:0061718) |
0.2 | 1.3 | GO:0051703 | mammillary body development(GO:0021767) social behavior(GO:0035176) intraspecies interaction between organisms(GO:0051703) |
0.1 | 1.3 | GO:0036376 | cellular potassium ion homeostasis(GO:0030007) sodium ion export from cell(GO:0036376) sodium ion export(GO:0071436) |
0.2 | 1.1 | GO:0046952 | ketone body catabolic process(GO:0046952) |
0.1 | 1.1 | GO:0031998 | regulation of fatty acid beta-oxidation(GO:0031998) |
0.1 | 1.1 | GO:0097324 | melanocyte migration(GO:0097324) |
0.0 | 1.1 | GO:0030032 | lamellipodium assembly(GO:0030032) |
0.0 | 0.9 | GO:0015986 | energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986) |
0.0 | 0.9 | GO:0014046 | dopamine secretion(GO:0014046) regulation of dopamine secretion(GO:0014059) |
0.1 | 0.8 | GO:1902766 | skeletal muscle satellite cell migration(GO:1902766) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.7 | GO:0005945 | 6-phosphofructokinase complex(GO:0005945) |
0.1 | 1.4 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
0.1 | 1.3 | GO:0005890 | sodium:potassium-exchanging ATPase complex(GO:0005890) cation-transporting ATPase complex(GO:0090533) |
0.0 | 1.3 | GO:0005747 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 1.2 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.0 | 1.0 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 0.9 | GO:0097038 | perinuclear endoplasmic reticulum(GO:0097038) |
0.0 | 0.8 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.0 | 0.7 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 0.6 | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.2 | 1.7 | GO:0016416 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.2 | 1.7 | GO:0003872 | 6-phosphofructokinase activity(GO:0003872) |
0.0 | 1.5 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.1 | 1.4 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
0.1 | 1.3 | GO:0001671 | ATPase activator activity(GO:0001671) |
0.2 | 1.1 | GO:0008260 | 3-oxoacid CoA-transferase activity(GO:0008260) |
0.2 | 1.0 | GO:0051430 | mu-type opioid receptor binding(GO:0031852) corticotropin-releasing hormone receptor 1 binding(GO:0051430) |
0.0 | 1.0 | GO:0015078 | hydrogen ion transmembrane transporter activity(GO:0015078) |
0.1 | 0.9 | GO:0015272 | ATP-activated inward rectifier potassium channel activity(GO:0015272) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.6 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.0 | 0.8 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.0 | 0.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.7 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 0.5 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 0.5 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 0.4 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.3 | 1.4 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.0 | 0.7 | REACTOME ACTIVATED AMPK STIMULATES FATTY ACID OXIDATION IN MUSCLE | Genes involved in Activated AMPK stimulates fatty-acid oxidation in muscle |
0.1 | 0.5 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 0.5 | REACTOME ACTIVATION OF RAC | Genes involved in Activation of Rac |
0.1 | 0.4 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.0 | 0.4 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.0 | 0.4 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.0 | 0.2 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.0 | 0.2 | REACTOME PROSTACYCLIN SIGNALLING THROUGH PROSTACYCLIN RECEPTOR | Genes involved in Prostacyclin signalling through prostacyclin receptor |