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PRJNA195909:zebrafish embryo and larva development

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Results for otpa+otpb

Z-value: 0.52

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Transcription factors associated with otpa+otpb

Gene Symbol Gene ID Gene Info
ENSDARG00000014201 orthopedia homeobox a
ENSDARG00000058379 orthopedia homeobox b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
otpadr11_v1_chr21_+_7582036_75820590.383.1e-01Click!
otpbdr11_v1_chr5_-_51619742_516197420.314.2e-01Click!

Activity profile of otpa+otpb motif

Sorted Z-values of otpa+otpb motif

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_35830625 1.57 ENSDART00000180028

chr17_+_15433518 1.09 ENSDART00000026180
fatty acid binding protein 7, brain, a
chr17_+_15433671 1.03 ENSDART00000149568
fatty acid binding protein 7, brain, a
chr21_+_25236297 0.96 ENSDART00000112783
transmembrane protein 45B
chr25_+_21833287 0.87 ENSDART00000187606
creatine kinase, mitochondrial 1
chr4_+_9669717 0.66 ENSDART00000004604
si:dkey-153k10.9
chr2_-_30668580 0.63 ENSDART00000087270
catenin (cadherin-associated protein), delta 2b
chr1_-_669717 0.61 ENSDART00000160564
cysteine/tyrosine-rich 1
chr3_-_15999501 0.60 ENSDART00000160668
NME/NM23 nucleoside diphosphate kinase 3
chr5_+_67390115 0.58 ENSDART00000193255
early B cell factor 2
chr3_-_19368435 0.56 ENSDART00000132987
sphingosine-1-phosphate receptor 5a
chr14_+_46313396 0.55 ENSDART00000047525
crystallin, beta A1, like 1
chr7_-_30174882 0.53 ENSDART00000110409
FERM domain containing 5
chr1_-_31534089 0.52 ENSDART00000007770
ladybird homeobox 1b
chr17_+_41992054 0.48 ENSDART00000182878
ENSDART00000111537
kizuna centrosomal protein
chr9_+_37152564 0.48 ENSDART00000189497
GLI family zinc finger 2a
chr6_+_25261297 0.47 ENSDART00000162824
ENSDART00000163490
ENSDART00000157790
ENSDART00000160978
ENSDART00000161545
ENSDART00000159978
kynurenine aminotransferase 3
chr15_-_21014270 0.46 ENSDART00000154019
si:ch211-212c13.10
chr4_+_57881965 0.46 ENSDART00000162234
si:dkeyp-44b5.4
chr9_-_22099536 0.46 ENSDART00000101923

chr1_+_21731382 0.46 ENSDART00000054395
paired box 5
chr6_+_25257728 0.46 ENSDART00000162581
kynurenine aminotransferase 3
chr20_-_45812144 0.45 ENSDART00000147897
ENSDART00000147637
fermitin family member 1
chr7_+_38811800 0.44 ENSDART00000052322
zgc:110699
chr14_-_413273 0.40 ENSDART00000163976
ENSDART00000179907
FAT atypical cadherin 4
chr5_-_38451082 0.40 ENSDART00000136428
cholinergic receptor, nicotinic, epsilon
chr20_+_11731039 0.38 ENSDART00000152215
ENSDART00000152585
si:ch211-155o21.3
chr20_+_98179 0.37 ENSDART00000022725
si:ch1073-155h21.1
chr12_+_20587179 0.37 ENSDART00000170127
arylsulfatase G
chr19_+_43359075 0.35 ENSDART00000148287
ENSDART00000149856
ENSDART00000188236
ENSDART00000136695
ENSDART00000193859
Yes-related kinase
chr11_+_34760628 0.35 ENSDART00000087216
si:dkey-202e22.2
chr1_-_25966068 0.33 ENSDART00000137869
ENSDART00000134192
synaptopodin 2b
chr8_-_33381430 0.33 ENSDART00000190019
LIM homeobox transcription factor 1, beta b
chr19_+_43297546 0.33 ENSDART00000168002
lysosomal protein transmembrane 5
chr15_+_5360407 0.33 ENSDART00000110420
odorant receptor, family A, subfamily 112, member 1
chr23_+_11285662 0.33 ENSDART00000111028
cell adhesion molecule L1-like a
chr15_-_22074315 0.32 ENSDART00000149830
dopamine receptor D2a
chr23_-_16485190 0.31 ENSDART00000155038
si:dkeyp-100a5.4
chr1_-_5455498 0.31 ENSDART00000040368
ENSDART00000114035
motor neuron and pancreas homeobox 2b
chr12_-_31794908 0.31 ENSDART00000105583
ENSDART00000153449
N-acetyltransferase 9 (GCN5-related, putative)
chr21_+_22840246 0.30 ENSDART00000151621
baculoviral IAP repeat containing 2
chr11_-_1509773 0.30 ENSDART00000050762
phosphatase and actin regulator 3b
chr4_-_9891874 0.29 ENSDART00000067193
adrenomedullin 2a
chr9_-_22834860 0.27 ENSDART00000146486
nebulin
chr16_+_46111849 0.27 ENSDART00000172232
synaptic vesicle glycoprotein 2A
chr8_-_33381913 0.25 ENSDART00000076420
LIM homeobox transcription factor 1, beta b
chr2_+_2223837 0.25 ENSDART00000101038
ENSDART00000129354
transmembrane inner ear
chr7_+_20512419 0.25 ENSDART00000173907
si:dkey-19b23.14
chr6_+_52350443 0.25 ENSDART00000151612
ENSDART00000151349
si:ch211-239j9.1
chr14_+_1170968 0.24 ENSDART00000125203
ENSDART00000193575
HOP homeobox
chr16_+_54209504 0.23 ENSDART00000020033
X-ray repair complementing defective repair in Chinese hamster cells 1
chr1_-_25966411 0.23 ENSDART00000193375
synaptopodin 2b
chr18_-_48547564 0.23 ENSDART00000138607
potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1
chr5_-_45877387 0.22 ENSDART00000183714
ENSDART00000041503
solute carrier family 4 (sodium bicarbonate cotransporter), member 4a
chr17_-_21418340 0.22 ENSDART00000007021
ATPase, H+ transporting, lysosomal, V1 subunit B, member a
chr3_-_16039619 0.22 ENSDART00000143324
splA/ryanodine receptor domain and SOCS box containing 3a
chr7_+_72441515 0.22 ENSDART00000167827

chr3_+_6469754 0.22 ENSDART00000185809
nucleoporin 85
chr14_-_451555 0.21 ENSDART00000190906
FAT atypical cadherin 4
chr1_+_45663727 0.21 ENSDART00000038574
ENSDART00000141144
ENSDART00000149565
trafficking protein particle complex 5
chr6_-_11768198 0.21 ENSDART00000183463
membrane-associated ring finger (C3HC4) 7
chr9_-_12811936 0.19 ENSDART00000188490
myosin X-like 3
chr15_-_40267485 0.19 ENSDART00000152253
potassium inwardly-rectifying channel, subfamily J, member 13
chr23_-_16484383 0.19 ENSDART00000187839
si:dkeyp-100a5.4
chr16_+_28932038 0.19 ENSDART00000149480
natriuretic peptide receptor 1b
chr13_-_29420885 0.19 ENSDART00000024225
choline O-acetyltransferase a
chr25_-_28674739 0.18 ENSDART00000067073
leucine rich repeat containing 10
chr11_+_44617021 0.18 ENSDART00000158887
RNA binding motif protein 34
chr17_+_49281597 0.17 ENSDART00000155599
zgc:113176
chr24_-_7995960 0.17 ENSDART00000186594
biogenesis of lysosomal organelles complex-1, subunit 5, muted
chr15_-_14552101 0.17 ENSDART00000171169
numb homolog (Drosophila)-like
chr17_+_24821627 0.16 ENSDART00000112389
WD repeat domain 43
chr10_+_42423318 0.16 ENSDART00000134282
neuropeptide Y receptor Y8a
chr17_+_50524573 0.16 ENSDART00000187974

chr4_+_13449775 0.16 ENSDART00000172552
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr12_+_31713239 0.16 ENSDART00000122379
hyaluronan binding protein 2
chr15_-_39955785 0.15 ENSDART00000154556
mutS homolog 5
chr18_-_17485419 0.15 ENSDART00000018764
forkhead box L1
chr22_-_36530902 0.15 ENSDART00000056188
info polymerase (RNA) II (DNA directed) polypeptide H
chr1_+_51039558 0.15 ENSDART00000024743
dpy-30 histone methyltransferase complex regulatory subunit
chr22_-_19552796 0.15 ENSDART00000148088
ENSDART00000105485
si:dkey-78l4.14
chr9_-_42418470 0.15 ENSDART00000144353
calcitonin receptor-like a
chr3_+_3681116 0.14 ENSDART00000109618
ADP-ribosyltransferase 4 (Dombrock blood group)
chr23_+_11347313 0.14 ENSDART00000135406
cell adhesion molecule L1-like a
chr3_+_26342768 0.13 ENSDART00000163832
si:ch211-156b7.4
chr14_-_858985 0.13 ENSDART00000148687
ENSDART00000149375
solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a
chr5_+_71802014 0.13 ENSDART00000124939
ENSDART00000097164
LIM homeobox 3
chr9_+_34127005 0.13 ENSDART00000167384
ENSDART00000078065
coagulation factor V
chr5_-_12272689 0.13 ENSDART00000099810
nitric oxide synthase 1 (neuronal)
chr23_-_1660708 0.13 ENSDART00000175138

chr5_-_45876908 0.12 ENSDART00000188229
solute carrier family 4 (sodium bicarbonate cotransporter), member 4a
chr4_+_54618332 0.12 ENSDART00000171824
si:ch211-227e10.2
chr11_+_40812590 0.12 ENSDART00000186690
ERBB receptor feedback inhibitor 1a
chr7_-_71829649 0.12 ENSDART00000160449
calcium channel, voltage-dependent, beta 2a
chr9_-_25055722 0.12 ENSDART00000137131
dynein, axonemal, heavy chain 7
chr6_+_39905021 0.11 ENSDART00000064904
endonuclease, polyU-specific
chr1_+_11882186 0.11 ENSDART00000193419
sorting nexin 8b
chr2_+_20605925 0.11 ENSDART00000191510
olfactomedin-like 2Bb
chr9_-_32177117 0.10 ENSDART00000078568
splicing factor 3b, subunit 1
chr10_-_11353469 0.10 ENSDART00000191847
lin-54 DREAM MuvB core complex component
chr25_+_13621563 0.09 ENSDART00000159428
si:ch211-172l8.4
chr9_+_28598577 0.09 ENSDART00000142623
ENSDART00000135947
si:ch73-7i4.1
chr3_+_13848226 0.09 ENSDART00000184342
interleukin enhancer binding factor 3b
chr2_+_29842878 0.09 ENSDART00000131376
si:ch211-207d6.2
chr2_-_37140423 0.09 ENSDART00000144220
tetraspanin 37
chr8_-_13046089 0.09 ENSDART00000137784
si:dkey-208b23.5
chr14_-_1355544 0.08 ENSDART00000060417
centrin 4
chr22_-_14247276 0.08 ENSDART00000033332
si:ch211-246m6.5
chr6_+_24420523 0.08 ENSDART00000185461
transforming growth factor, beta receptor III
chr17_+_31914877 0.07 ENSDART00000177801
family with sequence similarity 196 member A
chr25_-_27722614 0.07 ENSDART00000190154
zgc:153935
chr10_+_11261576 0.07 ENSDART00000155333
hydroxysteroid dehydrogenase like 2
chr4_-_1801519 0.07 ENSDART00000188604
ENSDART00000135749
nudix (nucleoside diphosphate linked moiety X)-type motif 4b
chr4_+_59845617 0.06 ENSDART00000167626
ENSDART00000123157
si:dkey-196n19.2
chr21_-_35534401 0.06 ENSDART00000112308
si:dkeyp-23e4.3
chr7_-_52388734 0.06 ENSDART00000174186
WD repeat domain 93
chr11_-_40742424 0.06 ENSDART00000173399
ENSDART00000021369
taste receptor, type 1, member 3
chr20_+_34717403 0.06 ENSDART00000034252
prepronociceptin b
chr5_+_2815021 0.06 ENSDART00000020472
4-hydroxyphenylpyruvate dioxygenase a
chr4_-_67980261 0.06 ENSDART00000182305
si:ch211-223k15.1
chr8_-_44926077 0.06 ENSDART00000084417
translocase of inner mitochondrial membrane 17 homolog B (yeast)
chr1_+_51721851 0.06 ENSDART00000040397
peroxiredoxin 2
chr6_-_40029423 0.05 ENSDART00000103230
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4b
chr24_+_28953089 0.05 ENSDART00000153761
RNA-binding region (RNP1, RRM) containing 3
chr13_-_12602920 0.05 ENSDART00000102311
leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b
chr1_-_19502322 0.04 ENSDART00000181888
ENSDART00000044030
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b
chr17_-_2386569 0.04 ENSDART00000121614
phospholipase C beta 2
chr11_-_2838699 0.04 ENSDART00000066189
LHFPL tetraspan subfamily member 5a
chr13_-_52089003 0.04 ENSDART00000187600
transmembrane protein 254
chr6_+_14980761 0.04 ENSDART00000087782
mitochondrial ribosomal protein S9
chr24_-_35282568 0.04 ENSDART00000167406
ENSDART00000088609
syntrophin, gamma 1
chr18_+_7456597 0.04 ENSDART00000142270
telomere repeat binding bouquet formation protein 1
chr9_+_23895711 0.04 ENSDART00000034686
COP9 signalosome subunit 8
chr17_+_16564921 0.03 ENSDART00000151904
forkhead box N3
chr10_+_26747755 0.03 ENSDART00000100329
coagulation factor IXb
chr11_-_10456387 0.03 ENSDART00000011087
ENSDART00000081827
epithelial cell transforming 2
chr6_-_33878665 0.03 ENSDART00000129916
transmembrane protein 69
chr2_+_37140448 0.03 ENSDART00000045016
ENSDART00000142940
peroxisomal biogenesis factor 19
chr5_+_60590796 0.03 ENSDART00000159859
transmembrane protein 132E
chr22_-_9183944 0.03 ENSDART00000188599
si:ch211-213a13.5
chr4_+_19700308 0.03 ENSDART00000027919
paired box 4
chr14_+_989733 0.02 ENSDART00000161487
ENSDART00000127317
si:ch73-308l14.2
chr15_+_37965953 0.02 ENSDART00000154192
si:dkey-238d18.10
chr18_-_5527050 0.02 ENSDART00000145400
ENSDART00000132498
ENSDART00000146209
zgc:153317
chr18_+_17725410 0.02 ENSDART00000090608
ring finger and SPRY domain containing 1
chr22_+_508290 0.02 ENSDART00000135403
NUAK family, SNF1-like kinase, 2
chr18_+_18439332 0.02 ENSDART00000043843
siah E3 ubiquitin protein ligase 1
chr16_+_40024883 0.00 ENSDART00000110100
histidine triad nucleotide binding protein 3
chr18_+_33272861 0.00 ENSDART00000131796
vomeronasal 2 receptor, a20
chr1_+_9086942 0.00 ENSDART00000055023
calcium channel, voltage-dependent, gamma subunit 3a

Network of associatons between targets according to the STRING database.

First level regulatory network of otpa+otpb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0048618 post-embryonic foregut morphogenesis(GO:0048618)
0.1 0.3 GO:0060547 negative regulation of necroptotic process(GO:0060546) negative regulation of necrotic cell death(GO:0060547)
0.1 0.9 GO:0046314 phosphagen metabolic process(GO:0006599) phosphocreatine metabolic process(GO:0006603) phosphagen biosynthetic process(GO:0042396) phosphocreatine biosynthetic process(GO:0046314)
0.1 0.2 GO:1900620 acetylcholine biosynthetic process(GO:0008292) acetate ester biosynthetic process(GO:1900620)
0.1 0.5 GO:0060005 reflex(GO:0060004) vestibular reflex(GO:0060005) vestibular receptor cell differentiation(GO:0060114) vestibular receptor cell development(GO:0060118)
0.0 0.6 GO:0021592 fourth ventricle development(GO:0021592)
0.0 0.2 GO:0051876 pigment granule dispersal(GO:0051876)
0.0 0.3 GO:0071691 cardiac muscle thin filament assembly(GO:0071691)
0.0 0.1 GO:0098923 retrograde trans-synaptic signaling by soluble gas(GO:0098923) retrograde trans-synaptic signaling by nitric oxide(GO:0098924)
0.0 0.6 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.3 GO:0051967 negative regulation of cytosolic calcium ion concentration(GO:0051481) negative regulation of synaptic transmission, glutamatergic(GO:0051967)
0.0 0.1 GO:1904158 axonemal central apparatus assembly(GO:1904158)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.3 GO:0021520 spinal cord motor neuron cell fate specification(GO:0021520)
0.0 0.1 GO:0044341 sodium-dependent phosphate transport(GO:0044341)
0.0 0.6 GO:0032233 positive regulation of actin filament bundle assembly(GO:0032233)
0.0 0.1 GO:0045604 regulation of epidermal cell differentiation(GO:0045604)
0.0 0.2 GO:0071678 olfactory bulb axon guidance(GO:0071678)
0.0 0.2 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.0 0.3 GO:0015701 bicarbonate transport(GO:0015701)
0.0 0.2 GO:0061026 cardiac muscle tissue regeneration(GO:0061026)
0.0 0.1 GO:0018120 peptidyl-arginine ADP-ribosylation(GO:0018120)
0.0 0.1 GO:0021846 cell proliferation in forebrain(GO:0021846)
0.0 0.2 GO:0000710 meiotic mismatch repair(GO:0000710)
0.0 0.1 GO:1901908 diphosphoinositol polyphosphate metabolic process(GO:0071543) diadenosine pentaphosphate metabolic process(GO:1901906) diadenosine pentaphosphate catabolic process(GO:1901907) diadenosine hexaphosphate metabolic process(GO:1901908) diadenosine hexaphosphate catabolic process(GO:1901909) adenosine 5'-(hexahydrogen pentaphosphate) metabolic process(GO:1901910) adenosine 5'-(hexahydrogen pentaphosphate) catabolic process(GO:1901911)
0.0 0.4 GO:0060997 dendritic spine morphogenesis(GO:0060997)
0.0 0.4 GO:0048246 macrophage chemotaxis(GO:0048246)
0.0 0.2 GO:0060088 auditory receptor cell stereocilium organization(GO:0060088)
0.0 0.4 GO:0070831 basement membrane assembly(GO:0070831)
0.0 0.0 GO:0010387 protein deneddylation(GO:0000338) COP9 signalosome assembly(GO:0010387)
0.0 0.0 GO:0038093 Fc receptor signaling pathway(GO:0038093)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:1990072 TRAPPIII protein complex(GO:1990072)
0.0 0.4 GO:0005892 acetylcholine-gated channel complex(GO:0005892)
0.0 0.4 GO:0043256 basal lamina(GO:0005605) laminin complex(GO:0043256)
0.0 0.2 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.1 GO:0005504 fatty acid binding(GO:0005504)
0.1 0.6 GO:0038036 sphingosine-1-phosphate receptor activity(GO:0038036)
0.1 0.9 GO:0016775 creatine kinase activity(GO:0004111) phosphotransferase activity, nitrogenous group as acceptor(GO:0016775)
0.0 0.1 GO:0001605 adrenomedullin receptor activity(GO:0001605) calcitonin gene-related peptide receptor activity(GO:0001635)
0.0 0.3 GO:0008510 sodium:bicarbonate symporter activity(GO:0008510)
0.0 0.2 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.0 0.3 GO:0043027 cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) cysteine-type endopeptidase regulator activity involved in apoptotic process(GO:0043028)
0.0 0.3 GO:0001591 dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)
0.0 0.1 GO:0005436 sodium:phosphate symporter activity(GO:0005436)
0.0 0.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.1 GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity(GO:0003868)
0.0 0.1 GO:0004517 nitric-oxide synthase activity(GO:0004517)
0.0 0.4 GO:0022848 acetylcholine-gated cation channel activity(GO:0022848)
0.0 0.2 GO:0015272 ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.0 0.3 GO:0004065 arylsulfatase activity(GO:0004065)
0.0 0.2 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0003956 NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956)
0.0 0.1 GO:0034431 endopolyphosphatase activity(GO:0000298) diphosphoinositol-polyphosphate diphosphatase activity(GO:0008486) bis(5'-adenosyl)-hexaphosphatase activity(GO:0034431) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0 0.1 GO:0050431 transforming growth factor beta binding(GO:0050431)
0.0 0.1 GO:0030626 U12 snRNA binding(GO:0030626)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.0 0.1 SA FAS SIGNALING The TNF-type receptor Fas induces apoptosis on ligand binding.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS Genes involved in Presynaptic nicotinic acetylcholine receptors
0.0 0.4 REACTOME THE ACTIVATION OF ARYLSULFATASES Genes involved in The activation of arylsulfatases
0.0 0.2 REACTOME RESOLUTION OF AP SITES VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the single-nucleotide replacement pathway
0.0 0.2 REACTOME VIRAL MESSENGER RNA SYNTHESIS Genes involved in Viral Messenger RNA Synthesis
0.0 0.3 REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS Genes involved in Apoptotic cleavage of cellular proteins
0.0 0.1 REACTOME COMMON PATHWAY Genes involved in Common Pathway