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PRJNA195909:zebrafish embryo and larva development
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Results for osr2
Z-value: 0.79
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Transcription factors associated with osr2
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
osr2
|
ENSDARG00000038006 | odd-skipped related transciption factor 2 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| osr2 | dr11_v1_chr16_-_54405976_54405976 | 0.75 | 2.0e-02 | Click! |
Activity profile of osr2 motif
Sorted Z-values of osr2 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr18_-_46010 | 2.65 |
ENSDART00000052641
|
gatm
|
glycine amidinotransferase (L-arginine:glycine amidinotransferase) |
| chr18_-_45736 | 2.53 |
ENSDART00000148373
ENSDART00000148950 |
gatm
|
glycine amidinotransferase (L-arginine:glycine amidinotransferase) |
| chr13_+_29778610 | 1.77 |
ENSDART00000132004
|
pax2a
|
paired box 2a |
| chr14_+_36246726 | 1.76 |
ENSDART00000105602
|
elovl6
|
ELOVL fatty acid elongase 6 |
| chr15_-_39848822 | 1.66 |
ENSDART00000155230
|
si:dkey-263j23.1
|
si:dkey-263j23.1 |
| chr23_-_46040618 | 1.30 |
ENSDART00000161415
|
CABZ01080918.1
|
|
| chr22_-_5006801 | 1.27 |
ENSDART00000106166
|
rx1
|
retinal homeobox gene 1 |
| chr23_+_36095260 | 1.19 |
ENSDART00000127384
|
hoxc9a
|
homeobox C9a |
| chr12_-_38548299 | 1.07 |
ENSDART00000153374
|
si:dkey-1f1.3
|
si:dkey-1f1.3 |
| chr18_-_977075 | 0.89 |
ENSDART00000032392
|
dhdhl
|
dihydrodiol dehydrogenase (dimeric), like |
| chr22_-_11626014 | 0.86 |
ENSDART00000063133
ENSDART00000160085 |
gcga
|
glucagon a |
| chr22_-_28871787 | 0.82 |
ENSDART00000104828
|
gtpbp2b
|
GTP binding protein 2b |
| chr10_+_38512270 | 0.77 |
ENSDART00000109752
|
serpinh1a
|
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a |
| chr20_-_29418620 | 0.73 |
ENSDART00000172634
|
ryr3
|
ryanodine receptor 3 |
| chr5_-_48307804 | 0.73 |
ENSDART00000182831
ENSDART00000186920 ENSDART00000183585 |
mef2cb
|
myocyte enhancer factor 2cb |
| chr23_+_7379728 | 0.70 |
ENSDART00000012194
|
gata5
|
GATA binding protein 5 |
| chr11_+_31285127 | 0.65 |
ENSDART00000160154
|
si:dkey-238i5.2
|
si:dkey-238i5.2 |
| chr13_+_30696286 | 0.63 |
ENSDART00000192411
|
cxcl18a.1
|
chemokine (C-X-C motif) ligand 18a, duplicate 1 |
| chr23_-_9925568 | 0.60 |
ENSDART00000081268
|
si:ch211-220i18.4
|
si:ch211-220i18.4 |
| chr10_-_13239367 | 0.59 |
ENSDART00000001253
|
si:busm1-57f23.1
|
si:busm1-57f23.1 |
| chr16_+_35344031 | 0.53 |
ENSDART00000167140
|
si:dkey-34d22.1
|
si:dkey-34d22.1 |
| chr3_-_28120092 | 0.45 |
ENSDART00000151143
|
rbfox1
|
RNA binding fox-1 homolog 1 |
| chr19_-_25519310 | 0.40 |
ENSDART00000089882
|
C1GALT1 (1 of many)
|
si:dkey-202e17.1 |
| chr20_+_30490682 | 0.36 |
ENSDART00000184871
|
myt1la
|
myelin transcription factor 1-like, a |
| chr14_+_5383060 | 0.30 |
ENSDART00000187825
|
lbx2
|
ladybird homeobox 2 |
| chr21_-_40834413 | 0.30 |
ENSDART00000148513
|
limk1b
|
LIM domain kinase 1b |
| chr19_-_25519612 | 0.28 |
ENSDART00000133150
|
C1GALT1 (1 of many)
|
si:dkey-202e17.1 |
| chr2_+_3986083 | 0.26 |
ENSDART00000188979
|
mkxb
|
mohawk homeobox b |
| chr2_+_5446882 | 0.24 |
ENSDART00000083260
|
dusp28
|
dual specificity phosphatase 28 |
| chr3_-_32958505 | 0.23 |
ENSDART00000147374
ENSDART00000136919 |
casp6l1
|
caspase 6, apoptosis-related cysteine peptidase, like 1 |
| chr6_-_40884453 | 0.21 |
ENSDART00000017968
ENSDART00000154100 |
sirt4
|
sirtuin 4 |
| chr23_-_4704938 | 0.19 |
ENSDART00000067293
|
cnbpa
|
CCHC-type zinc finger, nucleic acid binding protein a |
| chr8_+_48858132 | 0.15 |
ENSDART00000124737
ENSDART00000079644 |
tp73
|
tumor protein p73 |
| chr2_-_48497175 | 0.13 |
ENSDART00000158839
|
CR391991.5
|
|
| chr12_+_28856151 | 0.11 |
ENSDART00000152969
|
nfe2l1b
|
nuclear factor, erythroid 2-like 1b |
| chr2_-_48512450 | 0.06 |
ENSDART00000160132
|
CR391991.1
|
|
| chr5_-_61787969 | 0.05 |
ENSDART00000112744
|
gas2l2
|
growth arrest specific 2 like 2 |
| chr21_+_21679086 | 0.05 |
ENSDART00000146225
|
or125-5
|
odorant receptor, family E, subfamily 125, member 5 |
| chr1_+_44826593 | 0.04 |
ENSDART00000162200
|
STX3
|
zgc:165520 |
| chr3_-_30384353 | 0.04 |
ENSDART00000186832
|
lrrc4ba
|
leucine rich repeat containing 4Ba |
| chr7_+_42206543 | 0.03 |
ENSDART00000112543
|
phkb
|
phosphorylase kinase, beta |
Network of associatons between targets according to the STRING database.
First level regulatory network of osr2
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.7 | 5.2 | GO:0006600 | creatine metabolic process(GO:0006600) creatine biosynthetic process(GO:0006601) |
| 0.3 | 1.2 | GO:1901492 | positive regulation of lymphangiogenesis(GO:1901492) |
| 0.2 | 1.8 | GO:0021588 | cerebellum formation(GO:0021588) |
| 0.2 | 0.7 | GO:0048618 | post-embryonic foregut morphogenesis(GO:0048618) |
| 0.1 | 1.8 | GO:0034625 | fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626) |
| 0.1 | 0.3 | GO:1904105 | positive regulation of convergent extension involved in gastrulation(GO:1904105) |
| 0.0 | 0.2 | GO:2000767 | positive regulation of cytoplasmic translation(GO:2000767) |
| 0.0 | 1.3 | GO:0060219 | camera-type eye photoreceptor cell differentiation(GO:0060219) |
| 0.0 | 0.9 | GO:0003323 | type B pancreatic cell development(GO:0003323) |
| 0.0 | 0.7 | GO:0051209 | release of sequestered calcium ion into cytosol(GO:0051209) |
| 0.0 | 0.8 | GO:0030199 | collagen fibril organization(GO:0030199) |
| 0.0 | 0.3 | GO:0051496 | positive regulation of stress fiber assembly(GO:0051496) |
| 0.0 | 0.7 | GO:0060914 | heart formation(GO:0060914) |
| 0.0 | 0.8 | GO:0006414 | translational elongation(GO:0006414) |
| 0.0 | 0.6 | GO:0000245 | spliceosomal complex assembly(GO:0000245) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.7 | GO:0005790 | smooth endoplasmic reticulum(GO:0005790) |
| 0.0 | 5.2 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
| 0.0 | 1.8 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 0.9 | GO:0031769 | glucagon receptor binding(GO:0031769) |
| 0.2 | 5.2 | GO:0016769 | transferase activity, transferring nitrogenous groups(GO:0016769) |
| 0.1 | 0.7 | GO:0048763 | ryanodine-sensitive calcium-release channel activity(GO:0005219) calcium-induced calcium release activity(GO:0048763) |
| 0.1 | 1.8 | GO:0009922 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
| 0.0 | 0.8 | GO:0005518 | collagen binding(GO:0005518) |
| 0.0 | 0.8 | GO:0003746 | translation elongation factor activity(GO:0003746) |
| 0.0 | 0.6 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
| 0.0 | 0.7 | GO:0042826 | histone deacetylase binding(GO:0042826) |
| 0.0 | 0.2 | GO:0070403 | NAD+ binding(GO:0070403) |
| 0.0 | 0.2 | GO:0033549 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) MAP kinase phosphatase activity(GO:0033549) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 1.8 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
| 0.0 | 5.2 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |