PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
osr1 | dr11_v1_chr13_+_32144370_32144370 | 0.68 | 4.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_29954709 Show fit | 4.83 |
ENSDART00000173904
|
alpha-tropomyosin |
|
chr3_-_55139127 Show fit | 4.46 |
ENSDART00000115324
|
hemoglobin, alpha embryonic 1.3 |
|
chr7_+_29955368 Show fit | 4.36 |
ENSDART00000173686
|
alpha-tropomyosin |
|
chr14_-_26536504 Show fit | 3.88 |
ENSDART00000105933
|
transforming growth factor, beta-induced |
|
chr9_-_45601103 Show fit | 3.67 |
ENSDART00000180465
|
anterior gradient 1 |
|
chr1_+_17593392 Show fit | 3.41 |
ENSDART00000078889
|
helt bHLH transcription factor |
|
chr9_-_22069364 Show fit | 3.11 |
ENSDART00000101938
|
crystallin, gamma M2b |
|
chr3_-_61181018 Show fit | 2.96 |
ENSDART00000187970
|
parvalbumin 4 |
|
chr18_-_45736 Show fit | 2.89 |
ENSDART00000148373
ENSDART00000148950 |
glycine amidinotransferase (L-arginine:glycine amidinotransferase) |
|
chr18_-_46010 Show fit | 2.85 |
ENSDART00000052641
|
glycine amidinotransferase (L-arginine:glycine amidinotransferase) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.4 | GO:0061515 | myeloid cell development(GO:0061515) |
1.9 | 5.7 | GO:0006600 | creatine metabolic process(GO:0006600) creatine biosynthetic process(GO:0006601) |
0.0 | 5.5 | GO:0002088 | lens development in camera-type eye(GO:0002088) |
0.2 | 4.5 | GO:0015671 | oxygen transport(GO:0015671) |
0.0 | 3.9 | GO:0071466 | cellular response to xenobiotic stimulus(GO:0071466) |
0.0 | 3.7 | GO:0009952 | anterior/posterior pattern specification(GO:0009952) |
0.0 | 2.2 | GO:0031101 | fin regeneration(GO:0031101) |
0.2 | 2.1 | GO:1900052 | regulation of isoprenoid metabolic process(GO:0019747) regulation of vitamin metabolic process(GO:0030656) regulation of retinoic acid biosynthetic process(GO:1900052) |
0.0 | 2.1 | GO:0008360 | regulation of cell shape(GO:0008360) |
0.0 | 2.1 | GO:0002040 | sprouting angiogenesis(GO:0002040) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.2 | GO:0005884 | actin filament(GO:0005884) |
0.0 | 5.4 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.4 | 4.5 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.0 | 4.3 | GO:0031012 | extracellular matrix(GO:0031012) |
0.6 | 2.4 | GO:0061702 | inflammasome complex(GO:0061702) |
0.0 | 2.4 | GO:0055037 | recycling endosome(GO:0055037) |
0.7 | 2.0 | GO:0098556 | cytoplasmic side of rough endoplasmic reticulum membrane(GO:0098556) |
0.0 | 2.0 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
0.1 | 1.7 | GO:0033180 | proton-transporting V-type ATPase, V1 domain(GO:0033180) |
0.0 | 1.6 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.2 | GO:0042803 | protein homodimerization activity(GO:0042803) |
0.2 | 5.7 | GO:0016769 | transferase activity, transferring nitrogenous groups(GO:0016769) |
0.1 | 5.5 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.1 | 5.1 | GO:0005518 | collagen binding(GO:0005518) |
0.0 | 4.9 | GO:0046983 | protein dimerization activity(GO:0046983) |
0.4 | 4.5 | GO:0031720 | haptoglobin binding(GO:0031720) |
0.0 | 3.2 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.2 | 2.4 | GO:0001530 | lipopolysaccharide binding(GO:0001530) |
0.0 | 2.3 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 1.8 | GO:0047617 | acyl-CoA hydrolase activity(GO:0047617) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.1 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 1.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.6 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.2 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 1.1 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.0 | 0.3 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.2 | SA FAS SIGNALING | The TNF-type receptor Fas induces apoptosis on ligand binding. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.0 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.0 | 4.2 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.2 | 3.9 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 2.0 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.2 | 1.7 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.0 | 1.6 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 1.3 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.0 | 1.3 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 1.2 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.0 | 0.6 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |