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PRJNA195909:zebrafish embryo and larva development

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Results for nr2f6a+nr2f6b

Z-value: 0.50

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Transcription factors associated with nr2f6a+nr2f6b

Gene Symbol Gene ID Gene Info
nr2f6b
ENSDARG00000003165 nuclear receptor subfamily 2, group F, member 6b
nr2f6a
ENSDARG00000003607 nuclear receptor subfamily 2, group F, member 6a

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nr2f6bdr11_v1_chr11_+_6116096_61160960.703.7e-02Click!
nr2f6adr11_v1_chr2_+_24374305_243743050.472.0e-01Click!

Activity profile of nr2f6a+nr2f6b motif

Sorted Z-values of nr2f6a+nr2f6b motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr4_+_12031958 1.37 ENSDART00000044154
tnnt2c
troponin T2c, cardiac
chr13_-_39159810 1.28 ENSDART00000131508
col9a1b
collagen, type IX, alpha 1b
chr13_-_39160018 1.15 ENSDART00000168795
col9a1b
collagen, type IX, alpha 1b
chr8_+_999421 1.00 ENSDART00000149528
fabp1b.1
fatty acid binding protein 1b, tandem duplicate 1
chr4_-_16451375 0.98 ENSDART00000192700
ENSDART00000128835
wu:fc23c09
wu:fc23c09
chr1_+_25848231 0.96 ENSDART00000027973
fabp2
fatty acid binding protein 2, intestinal
chr21_-_44512893 0.89 ENSDART00000166853
zgc:136410
zgc:136410
chr2_+_42191592 0.79 ENSDART00000144716
cavin4a
caveolae associated protein 4a
chr6_+_1787160 0.67 ENSDART00000113505
myl9b
myosin, light chain 9b, regulatory
chr9_+_54644626 0.67 ENSDART00000190609
egfl6
EGF-like-domain, multiple 6
chr11_-_6974022 0.65 ENSDART00000172851
COMP
si:ch211-43f4.1
chr22_-_15587360 0.64 ENSDART00000142717
ENSDART00000138978
tpm4a
tropomyosin 4a
chr20_+_2281933 0.58 ENSDART00000137579
si:ch73-18b11.2
si:ch73-18b11.2
chr5_+_49744713 0.57 ENSDART00000133384
nr2f1a
nuclear receptor subfamily 2, group F, member 1a
chr10_-_44027391 0.57 ENSDART00000145404
crybb1
crystallin, beta B1
chr13_-_37127970 0.53 ENSDART00000135510
syne2b
spectrin repeat containing, nuclear envelope 2b
chr11_+_30729745 0.51 ENSDART00000103270
slc22a7a
solute carrier family 22 (organic anion transporter), member 7a
chr6_-_13783604 0.51 ENSDART00000149536
ENSDART00000041269
ENSDART00000150102
cryba2a
crystallin, beta A2a
chr11_+_11201096 0.49 ENSDART00000171916
ENSDART00000171521
ENSDART00000087105
ENSDART00000159603
myom2a
myomesin 2a
chr23_-_45504991 0.47 ENSDART00000148761
col24a1
collagen type XXIV alpha 1
chr25_+_15647993 0.45 ENSDART00000186578
ENSDART00000031828
spon1b
spondin 1b
chr1_+_23783349 0.45 ENSDART00000007531
slit2
slit homolog 2 (Drosophila)
chr16_-_50229193 0.44 ENSDART00000161782
ENSDART00000010081
etfb
electron-transfer-flavoprotein, beta polypeptide
chr6_+_60055168 0.44 ENSDART00000008752
pck1
phosphoenolpyruvate carboxykinase 1 (soluble)
chr6_+_40775800 0.43 ENSDART00000085090
si:ch211-157b11.8
si:ch211-157b11.8
chr7_-_24046999 0.40 ENSDART00000144616
ENSDART00000124653
ENSDART00000127813
dhrs4
dehydrogenase/reductase (SDR family) member 4
chr10_+_20128267 0.37 ENSDART00000064615
dmtn
dematin actin binding protein
chr7_+_31871830 0.30 ENSDART00000139899
mybpc3
myosin binding protein C, cardiac
chr16_+_54875530 0.29 ENSDART00000149795
nr0b2a
nuclear receptor subfamily 0, group B, member 2a
chr17_+_450956 0.27 ENSDART00000183022
ENSDART00000171386
zgc:194887
zgc:194887
chr3_-_3496738 0.26 ENSDART00000186849
CABZ01040998.1

chr24_+_81527 0.23 ENSDART00000192139
reck
reversion-inducing-cysteine-rich protein with kazal motifs
chr23_+_27912079 0.23 ENSDART00000171859
BX539336.1

chr18_-_7400075 0.19 ENSDART00000101250
si:dkey-30c15.13
si:dkey-30c15.13
chr19_+_2275019 0.18 ENSDART00000136138
itgb8
integrin, beta 8
chr18_-_1185772 0.18 ENSDART00000143245
nptnb
neuroplastin b
chr23_+_44634187 0.17 ENSDART00000143688
si:ch73-265d7.2
si:ch73-265d7.2
chr24_-_21172122 0.16 ENSDART00000154259
atp6v1ab
ATPase H+ transporting V1 subunit Ab
chr23_-_46126444 0.15 ENSDART00000030004
CABZ01071903.1

chr1_-_51720633 0.14 ENSDART00000045894
rnaseh2a
ribonuclease H2, subunit A
chr18_-_7399767 0.14 ENSDART00000181689
si:dkey-30c15.13
si:dkey-30c15.13
chr9_+_32860345 0.13 ENSDART00000121751
si:dkey-145p14.5
si:dkey-145p14.5
chr16_-_24605969 0.13 ENSDART00000163305
ENSDART00000167121
fxyd6l
FXYD domain containing ion transport regulator 6 like
chr18_-_18850302 0.12 ENSDART00000131965
ENSDART00000167624
tgm2l
transglutaminase 2, like
chr3_+_25999477 0.11 ENSDART00000024316
mcm5
minichromosome maintenance complex component 5
chr3_+_32553714 0.10 ENSDART00000165638
pax10
paired box 10
chr23_+_44633858 0.10 ENSDART00000180728
si:ch73-265d7.2
si:ch73-265d7.2
chr13_+_45980163 0.10 ENSDART00000074547
ENSDART00000005195
bsdc1
BSD domain containing 1
chr18_-_48550426 0.09 ENSDART00000145189
kcnj1a.1
potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1
chr22_-_16997475 0.08 ENSDART00000090237
nfia
nuclear factor I/A
chr18_+_31410652 0.08 ENSDART00000098504
def8
differentially expressed in FDCP 8 homolog (mouse)
chr23_+_36340520 0.07 ENSDART00000011201
copz1
coatomer protein complex, subunit zeta 1
chr8_-_979735 0.07 ENSDART00000149612
znf366
zinc finger protein 366
chr23_-_21797517 0.07 ENSDART00000110041
lrrc38a
leucine rich repeat containing 38a
chr5_+_43870389 0.07 ENSDART00000141002
zgc:112966
zgc:112966
chr23_+_42810055 0.07 ENSDART00000186647
myl9a
myosin, light chain 9a, regulatory
chr22_-_16997887 0.06 ENSDART00000138233
nfia
nuclear factor I/A
chr8_-_8698607 0.06 ENSDART00000046712
zgc:86609
zgc:86609
chr18_-_15771551 0.05 ENSDART00000130931
ENSDART00000154079
si:ch211-219a15.3
si:ch211-219a15.3
chr8_+_36803415 0.03 ENSDART00000111680
iqsec2b
IQ motif and Sec7 domain 2b
chr3_+_39566999 0.02 ENSDART00000146867
aldoaa
aldolase a, fructose-bisphosphate, a
chr6_-_49873020 0.01 ENSDART00000148511
gnas
GNAS complex locus
chr22_-_16997246 0.00 ENSDART00000090242
nfia
nuclear factor I/A
chr25_+_418932 0.00 ENSDART00000059193
prtgb
protogenin homolog b (Gallus gallus)

Network of associatons between targets according to the STRING database.

First level regulatory network of nr2f6a+nr2f6b

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0007414 axonal defasciculation(GO:0007414)
0.1 0.4 GO:0019626 glycerol biosynthetic process(GO:0006114) alditol biosynthetic process(GO:0019401) short-chain fatty acid catabolic process(GO:0019626) response to dexamethasone(GO:0071548)
0.1 0.2 GO:1905048 regulation of metallopeptidase activity(GO:1905048)
0.1 0.5 GO:0038063 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) collagen-activated signaling pathway(GO:0038065)
0.1 0.9 GO:0003209 cardiac atrium morphogenesis(GO:0003209)
0.0 2.0 GO:0060048 cardiac muscle contraction(GO:0060048)
0.0 0.7 GO:1903672 positive regulation of sprouting angiogenesis(GO:1903672)
0.0 0.1 GO:0043137 DNA replication, removal of RNA primer(GO:0043137)
0.0 0.4 GO:0030032 lamellipodium assembly(GO:0030032)
0.0 0.3 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.0 0.3 GO:0007168 receptor guanylyl cyclase signaling pathway(GO:0007168)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0005592 collagen type XI trimer(GO:0005592)
0.1 0.2 GO:1990909 Wnt signalosome(GO:1990909)
0.0 0.1 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 1.4 GO:0005861 troponin complex(GO:0005861)
0.0 2.4 GO:0005581 collagen trimer(GO:0005581)
0.0 0.5 GO:0031430 M band(GO:0031430)
0.0 0.7 GO:0005901 caveola(GO:0005901) plasma membrane raft(GO:0044853)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.0 GO:0005504 fatty acid binding(GO:0005504)
0.1 1.4 GO:0031013 troponin C binding(GO:0030172) troponin I binding(GO:0031013)
0.0 0.5 GO:0048495 Roundabout binding(GO:0048495)
0.0 0.3 GO:0032036 myosin heavy chain binding(GO:0032036)
0.0 0.1 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.2 GO:0008191 metalloendopeptidase inhibitor activity(GO:0008191)
0.0 0.2 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.0 0.8 GO:0005178 integrin binding(GO:0005178)
0.0 1.1 GO:0005212 structural constituent of eye lens(GO:0005212)
0.0 0.4 GO:0030145 manganese ion binding(GO:0030145)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID GLYPICAN 1PATHWAY Glypican 1 network
0.0 0.2 PID INTEGRIN5 PATHWAY Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.0 0.5 NABA COLLAGENS Genes encoding collagen proteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.0 0.5 REACTOME ACTIVATION OF RAC Genes involved in Activation of Rac