PRJNA195909:zebrafish embryo and larva development

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
nr2f1b Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000017168	nuclear receptor subfamily 2, group F, member 1b
nr2f5 Links NCBI UniProt ZFIN ENSEMBL Google	ENSDARG00000033172	nuclear receptor subfamily 2, group F, member 5

Gene	Promoter	Pearson corr. coef.	P-value	Plot
nr2f5	dr11_v1_chr16_+_46294337_46294337	0.51	1.6e-01	Click!
nr2f1b	dr11_v1_chr10_+_43797130_43797130	-0.11	7.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr22_+_37888249 Show fit	0.60	ENSDART00000076082	fetub Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fetuin B
chr7_-_2039060 Show fit	0.49	ENSDART00000173879	si:cabz01007794.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:cabz01007794.1
chr20_-_16906623 Show fit	0.45	ENSDART00000012859 ENSDART00000171628	psma6b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	proteasome subunit alpha 6b
chr21_+_25688388 Show fit	0.43	ENSDART00000125709	bicdl2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	bicaudal-D-related protein 2
chr2_+_52847049 Show fit	0.37	ENSDART00000121980	creb3l3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cAMP responsive element binding protein 3-like 3b
chr13_-_23007813 Show fit	0.33	ENSDART00000057638	hk1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	hexokinase 1
chr5_+_54400971 Show fit	0.30	ENSDART00000169695	bspry Links NCBI UniProt ZFIN ENSEMBL Google Show fit	B-box and SPRY domain containing
chr2_+_58841181 Show fit	0.27	ENSDART00000164102	cirbpa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cold inducible RNA binding protein a
chr4_+_1530287 Show fit	0.25	ENSDART00000067446	slc38a4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 38, member 4
chr5_+_64856666 Show fit	0.25	ENSDART00000050863	zgc:101858 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:101858
chr1_-_55840105 Show fit	0.24	ENSDART00000137909	samd1b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sterile alpha motif domain containing 1b
chr22_-_26834043 Show fit	0.23	ENSDART00000087202	si:dkey-44g23.5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-44g23.5
chr14_-_5817039 Show fit	0.23	ENSDART00000131820	kazald2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Kazal-type serine peptidase inhibitor domain 2
chr15_+_27364394 Show fit	0.21	ENSDART00000122101	tbx2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	T-box 2b
chr20_-_11178022 Show fit	0.19	ENSDART00000152246	flrt2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	fibronectin leucine rich transmembrane protein 2
chr17_+_389218 Show fit	0.19	ENSDART00000162898	si:rp71-62i8.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-62i8.1
chr2_+_16449627 Show fit	0.18	ENSDART00000005381	zgc:110269 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:110269
chr17_+_17955063 Show fit	0.17	ENSDART00000104999	ccdc85ca Links NCBI UniProt ZFIN ENSEMBL Google Show fit	coiled-coil domain containing 85C, a
chr1_-_20824411 Show fit	0.16	ENSDART00000182810	tll1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	tolloid-like 1
chr1_+_59154521 Show fit	0.16	ENSDART00000130089 ENSDART00000152456	soul5l Links NCBI UniProt ZFIN ENSEMBL Google Show fit	heme-binding protein soul5, like
chr2_-_9607879 Show fit	0.16	ENSDART00000056899	txndc12 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	thioredoxin domain containing 12 (endoplasmic reticulum)
chr24_+_37700259 Show fit	0.15	ENSDART00000066556	zmp:0000000624 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zmp:0000000624
chr2_+_33382648 Show fit	0.15	ENSDART00000137207 ENSDART00000098831	slc6a9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr6_+_9677420 Show fit	0.15	ENSDART00000064995	sumo1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	small ubiquitin-like modifier 1
chr24_-_21989406 Show fit	0.14	ENSDART00000032963	apoob Links NCBI UniProt ZFIN ENSEMBL Google Show fit	apolipoprotein O, b
chr8_-_41273768 Show fit	0.14	ENSDART00000108518	rnf10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 10
chr19_+_26828502 Show fit	0.13	ENSDART00000183654 ENSDART00000126006 ENSDART00000185341	FP085398.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr3_-_12970418 Show fit	0.13	ENSDART00000158747	pdgfab Links NCBI UniProt ZFIN ENSEMBL Google Show fit	platelet-derived growth factor alpha polypeptide b
chr8_-_41273461 Show fit	0.13	ENSDART00000190598	rnf10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ring finger protein 10
chr10_-_29831944 Show fit	0.12	ENSDART00000063923 ENSDART00000136264	zpr1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ZPR1 zinc finger
chr3_-_19517462 Show fit	0.12	ENSDART00000162027	CU571315.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr14_-_24391424 Show fit	0.12	ENSDART00000113376 ENSDART00000126894	fam13b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	family with sequence similarity 13, member B
chr4_-_2440175 Show fit	0.12	ENSDART00000058059	OSBPL8 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	oxysterol binding protein like 8
chr2_+_43750899 Show fit	0.11	ENSDART00000135836	arhgap12a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Rho GTPase activating protein 12a
chr23_+_31245395 Show fit	0.11	ENSDART00000053588	irak1bp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	interleukin-1 receptor-associated kinase 1 binding protein 1
chr20_+_43925266 Show fit	0.10	ENSDART00000037379	clic5b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	chloride intracellular channel 5b
chr20_+_25581627 Show fit	0.10	ENSDART00000030229	cyp2p9 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	cytochrome P450, family 2, subfamily P, polypeptide 9
chr3_+_41917499 Show fit	0.10	ENSDART00000028673	lfng Links NCBI UniProt ZFIN ENSEMBL Google Show fit	LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr2_+_21605547 Show fit	0.10	ENSDART00000112014	mplkip Links NCBI UniProt ZFIN ENSEMBL Google Show fit	M-phase specific PLK1 interacting protein
chr2_+_3696038 Show fit	0.10	ENSDART00000150499 ENSDART00000136906 ENSDART00000164152 ENSDART00000128514 ENSDART00000108964	egfra Links NCBI UniProt ZFIN ENSEMBL Google Show fit	epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)
chr4_+_76441823 Show fit	0.10	ENSDART00000163932	si:dkey-16p6.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-16p6.1
chr4_+_3980247 Show fit	0.09	ENSDART00000049194	gpr37b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	G protein-coupled receptor 37b
chr22_-_31788170 Show fit	0.08	ENSDART00000170925	pimr207 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 207
chr13_+_24834199 Show fit	0.08	ENSDART00000101274	zgc:153981 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:153981
chr8_+_23711842 Show fit	0.07	ENSDART00000128783	ppardb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	peroxisome proliferator-activated receptor delta b
chr1_-_26544268 Show fit	0.07	ENSDART00000152117	si:ch211-202n12.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-202n12.2
chr4_+_1722899 Show fit	0.06	ENSDART00000021139	fgfr1op2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	FGFR1 oncogene partner 2
chr24_+_42127983 Show fit	0.06	ENSDART00000190157 ENSDART00000176032 ENSDART00000175790	wwp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WW domain containing E3 ubiquitin protein ligase 1
chr11_-_34147205 Show fit	0.06	ENSDART00000173216	atp13a3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	ATPase 13A3
chr15_-_34933560 Show fit	0.06	ENSDART00000006288	dhx16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr18_-_6975175 Show fit	0.06	ENSDART00000134194	si:dkey-266m15.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-266m15.6
chr7_+_4474880 Show fit	0.06	ENSDART00000143528	si:dkey-83f18.14 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-83f18.14
chr24_-_21991770 Show fit	0.06	ENSDART00000147296	si:rp71-1f1.4 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:rp71-1f1.4
chr2_+_56213694 Show fit	0.05	ENSDART00000162582	upf1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	upf1 regulator of nonsense transcripts homolog (yeast)
chr19_-_48039400 Show fit	0.05	ENSDART00000166748 ENSDART00000165921	csf3b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	colony stimulating factor 3 (granulocyte) b
chr19_+_5291935 Show fit	0.05	ENSDART00000141237	si:dkeyp-113d7.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkeyp-113d7.10
chr1_+_144284 Show fit	0.05	ENSDART00000064061	prozb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protein Z, vitamin K-dependent plasma glycoprotein b
chr18_-_27316599 Show fit	0.05	ENSDART00000028294	zgc:56106 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	zgc:56106
chr8_-_13428740 Show fit	0.04	ENSDART00000131826	CR354547.3 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr24_+_42132962 Show fit	0.04	ENSDART00000187739	wwp1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	WW domain containing E3 ubiquitin protein ligase 1
chr1_-_40132831 Show fit	0.04	ENSDART00000135647	si:ch211-113e8.10 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:ch211-113e8.10
chr2_+_2904080 Show fit	0.04	ENSDART00000110416	eif2b5 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	eukaryotic translation initiation factor 2B, subunit 5 epsilon
chr18_+_7073130 Show fit	0.03	ENSDART00000101216 ENSDART00000148947	si:dkey-88e18.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	si:dkey-88e18.2
chr16_+_20895904 Show fit	0.03	ENSDART00000052662	hoxa13b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	homeobox A13b
chr25_-_10791437 Show fit	0.03	ENSDART00000127054	BX572619.1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr7_+_27251376 Show fit	0.03	ENSDART00000173521 ENSDART00000173962	sox6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	SRY (sex determining region Y)-box 6
chr12_+_7491690 Show fit	0.03	ENSDART00000152564	phyhiplb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	phytanoyl-CoA 2-hydroxylase interacting protein-like b
chr19_+_7506380 Show fit	0.02	ENSDART00000182837	prcc Links NCBI UniProt ZFIN ENSEMBL Google Show fit	papillary renal cell carcinoma (translocation-associated)
chr10_-_21054059 Show fit	0.02	ENSDART00000139733	pcdh1a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	protocadherin 1a
chr17_+_14711765 Show fit	0.02	ENSDART00000012889	cx28.6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	connexin 28.6
chr18_+_3338228 Show fit	0.02	ENSDART00000161520	gdpd4a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycerophosphodiester phosphodiesterase domain containing 4a
chr2_-_1468258 Show fit	0.02	ENSDART00000114431	gpaa1 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	glycosylphosphatidylinositol anchor attachment 1
chr13_-_50546634 Show fit	0.02	ENSDART00000192127	CU570781.2 Links NCBI UniProt ZFIN ENSEMBL Google Show fit
chr6_+_103361 Show fit	0.02	ENSDART00000151899	ldlrb Links NCBI UniProt ZFIN ENSEMBL Google Show fit	low density lipoprotein receptor b
chr8_-_13419049 Show fit	0.02	ENSDART00000133656	pimr101 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 101
chr8_-_13471916 Show fit	0.02	ENSDART00000146558	pimr105 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 105
chr8_-_13486258 Show fit	0.01	ENSDART00000137459	pimr104 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	Pim proto-oncogene, serine/threonine kinase, related 104
chr7_+_29153018 Show fit	0.01	ENSDART00000138065	tmppe Links NCBI UniProt ZFIN ENSEMBL Google Show fit	transmembrane protein with metallophosphoesterase domain
chr1_-_47771742 Show fit	0.01	ENSDART00000101079	neurl1aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	neuralized E3 ubiquitin protein ligase 1Aa
chr24_+_42117231 Show fit	0.01	ENSDART00000067734	snx16 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	sorting nexin 16
chr17_+_5351922 Show fit	0.01	ENSDART00000105394	runx2a Links NCBI UniProt ZFIN ENSEMBL Google Show fit	runt-related transcription factor 2a
chr15_-_41756454 Show fit	0.01	ENSDART00000139498 ENSDART00000099302	ftr72 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	finTRIM family, member 72
chr8_+_36803415 Show fit	0.01	ENSDART00000111680	iqsec2b Links NCBI UniProt ZFIN ENSEMBL Google Show fit	IQ motif and Sec7 domain 2b
chr25_+_1549838 Show fit	0.00	ENSDART00000115001	avpr1aa Links NCBI UniProt ZFIN ENSEMBL Google Show fit	arginine vasopressin receptor 1Aa
chr20_+_53577502 Show fit	0.00	ENSDART00000126983	myh6 Links NCBI UniProt ZFIN ENSEMBL Google Show fit	myosin, heavy chain 6, cardiac muscle, alpha

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0055107	Golgi to secretory granule transport(GO:0055107)
0.1	0.2	GO:0072068	distal convoluted tubule development(GO:0072025) late distal convoluted tubule development(GO:0072068)
0.0	0.2	GO:0035124	embryonic caudal fin morphogenesis(GO:0035124)
0.0	0.1	GO:0060092	regulation of synaptic transmission, glycinergic(GO:0060092)
0.0	0.1	GO:0071276	cellular response to cadmium ion(GO:0071276)
0.0	0.3	GO:0031643	positive regulation of myelination(GO:0031643)
0.0	0.2	GO:0061687	detoxification of inorganic compound(GO:0061687)
0.0	0.3	GO:0001678	cellular glucose homeostasis(GO:0001678)
0.0	0.1	GO:0055016	hypochord development(GO:0055016)
0.0	0.3	GO:0048026	positive regulation of mRNA splicing, via spliceosome(GO:0048026)
0.0	0.1	GO:0031954	positive regulation of protein autophosphorylation(GO:0031954)
0.0	0.4	GO:0010499	proteasomal ubiquitin-independent protein catabolic process(GO:0010499)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	GO:0019773	proteasome core complex, alpha-subunit complex(GO:0019773)
0.0	0.2	GO:0005614	interstitial matrix(GO:0005614)
0.0	0.1	GO:0061617	MICOS complex(GO:0061617)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0008865	glucokinase activity(GO:0004340) hexokinase activity(GO:0004396) glucose binding(GO:0005536) fructokinase activity(GO:0008865) mannokinase activity(GO:0019158)
0.0	0.2	GO:0047134	protein-disulfide reductase activity(GO:0047134)
0.0	0.1	GO:0005006	epidermal growth factor-activated receptor activity(GO:0005006)
0.0	0.1	GO:0033829	O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829)
0.0	0.2	GO:0004523	RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0	0.4	GO:0035497	cAMP response element binding(GO:0035497)
0.0	0.6	GO:0004869	cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0	0.1	GO:0005161	platelet-derived growth factor receptor binding(GO:0005161)
0.0	0.1	GO:0015187	glycine transmembrane transporter activity(GO:0015187)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME REGULATION OF IFNG SIGNALING	Genes involved in Regulation of IFNG signaling
0.0	0.1	REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS	Genes involved in Na+/Cl- dependent neurotransmitter transporters
0.0	0.3	REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE	Genes involved in Amino acid transport across the plasma membrane