PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
irx5a | dr11_v1_chr7_-_35710263_35710263 | -0.94 | 1.3e-04 | Click! |
irx5b | dr11_v1_chr25_+_36152215_36152215 | -0.92 | 4.2e-04 | Click! |
irx3a | dr11_v1_chr7_+_36035432_36035432 | -0.89 | 1.4e-03 | Click! |
irx3b | dr11_v1_chr25_-_36492779_36492779 | -0.77 | 1.6e-02 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.3 | GO:0007098 | centrosome cycle(GO:0007098) centrosome organization(GO:0051297) |
0.1 | 3.2 | GO:0000154 | rRNA modification(GO:0000154) |
0.1 | 3.0 | GO:0051639 | actin filament network formation(GO:0051639) |
0.0 | 2.6 | GO:0031122 | cytoplasmic microtubule organization(GO:0031122) |
0.6 | 2.5 | GO:0090230 | regulation of centromere complex assembly(GO:0090230) regulation of kinetochore assembly(GO:0090234) |
0.1 | 2.5 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.1 | 2.4 | GO:0016925 | protein sumoylation(GO:0016925) |
0.8 | 2.3 | GO:0015882 | L-ascorbic acid transport(GO:0015882) L-ascorbic acid metabolic process(GO:0019852) |
0.1 | 2.3 | GO:2000369 | regulation of clathrin-mediated endocytosis(GO:2000369) |
0.0 | 2.2 | GO:0090630 | activation of GTPase activity(GO:0090630) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.2 | GO:0005730 | nucleolus(GO:0005730) |
0.0 | 3.8 | GO:0016604 | nuclear body(GO:0016604) |
0.0 | 2.7 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.3 | 2.4 | GO:0070652 | HAUS complex(GO:0070652) |
0.0 | 2.4 | GO:0016592 | mediator complex(GO:0016592) |
0.0 | 2.2 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.0 | 2.2 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 2.2 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 2.2 | GO:0005813 | centrosome(GO:0005813) |
0.4 | 2.0 | GO:0031298 | replication fork protection complex(GO:0031298) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.9 | GO:0004842 | ubiquitin-protein transferase activity(GO:0004842) |
0.0 | 6.4 | GO:0046982 | protein heterodimerization activity(GO:0046982) |
0.0 | 5.8 | GO:0005085 | guanyl-nucleotide exchange factor activity(GO:0005085) |
0.1 | 4.7 | GO:0003724 | RNA helicase activity(GO:0003724) |
0.1 | 4.3 | GO:0000049 | tRNA binding(GO:0000049) |
0.0 | 3.6 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.3 | 3.5 | GO:0035198 | miRNA binding(GO:0035198) |
0.0 | 3.4 | GO:0042802 | identical protein binding(GO:0042802) |
0.0 | 3.4 | GO:0019901 | protein kinase binding(GO:0019901) |
0.2 | 3.3 | GO:0003688 | DNA replication origin binding(GO:0003688) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.5 | PID AURORA A PATHWAY | Aurora A signaling |
0.1 | 2.5 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.2 | 2.0 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.1 | 1.8 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.1 | 1.7 | PID MYC PATHWAY | C-MYC pathway |
0.1 | 1.6 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 1.6 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 1.1 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 1.1 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.0 | PID ERBB2 ERBB3 PATHWAY | ErbB2/ErbB3 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.9 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
0.0 | 2.3 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.1 | 2.1 | REACTOME A TETRASACCHARIDE LINKER SEQUENCE IS REQUIRED FOR GAG SYNTHESIS | Genes involved in A tetrasaccharide linker sequence is required for GAG synthesis |
0.0 | 1.9 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 1.7 | REACTOME RIP MEDIATED NFKB ACTIVATION VIA DAI | Genes involved in RIP-mediated NFkB activation via DAI |
0.1 | 1.6 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
0.1 | 1.5 | REACTOME IRON UPTAKE AND TRANSPORT | Genes involved in Iron uptake and transport |
0.0 | 1.4 | REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT | Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT) |
0.1 | 1.3 | REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES | Genes involved in Recruitment of NuMA to mitotic centrosomes |
0.0 | 1.3 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |