PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hnf4g | dr11_v1_chr24_-_23671709_23671709 | -0.79 | 1.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_-_2590222 Show fit | 5.59 |
ENSDART00000185711
|
|
|
chr17_-_2573021 Show fit | 4.60 |
ENSDART00000074181
|
zona pellucida glycoprotein 3, tandem duplicate 2 |
|
chr17_-_2578026 Show fit | 4.48 |
ENSDART00000065821
|
zona pellucida glycoprotein 3, tandem duplicate 2 |
|
chr4_-_77114795 Show fit | 4.33 |
ENSDART00000144849
|
|
|
chr17_-_2595736 Show fit | 4.07 |
ENSDART00000128797
|
zona pellucida glycoprotein 3, tandem duplicate 2 |
|
chr10_+_19569052 Show fit | 4.05 |
ENSDART00000058425
|
|
|
chr17_-_2584423 Show fit | 3.91 |
ENSDART00000013506
|
zona pellucida glycoprotein 3, tandem duplicate 2 |
|
chr9_+_8380728 Show fit | 3.51 |
ENSDART00000133501
|
si:ch1073-75o15.4 |
|
chr22_-_24992532 Show fit | 3.10 |
ENSDART00000102751
|
si:dkey-179j5.5 |
|
chr8_-_49207319 Show fit | 2.69 |
ENSDART00000022870
|
family with sequence similarity 110, member A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 17.1 | GO:2000344 | binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344) |
0.1 | 3.1 | GO:0032355 | response to estradiol(GO:0032355) |
0.1 | 1.8 | GO:0032467 | positive regulation of cytokinesis(GO:0032467) |
0.0 | 1.8 | GO:0036269 | swimming behavior(GO:0036269) |
0.0 | 1.5 | GO:0055008 | cardiac muscle tissue morphogenesis(GO:0055008) |
0.2 | 1.4 | GO:0033206 | meiotic cytokinesis(GO:0033206) polar body extrusion after meiotic divisions(GO:0040038) |
0.2 | 1.4 | GO:0016121 | carotene metabolic process(GO:0016119) carotene catabolic process(GO:0016121) terpene metabolic process(GO:0042214) terpene catabolic process(GO:0046247) |
0.1 | 1.4 | GO:0051452 | vacuolar acidification(GO:0007035) pH reduction(GO:0045851) intracellular pH reduction(GO:0051452) |
0.0 | 1.3 | GO:0070936 | protein K48-linked ubiquitination(GO:0070936) |
0.4 | 1.1 | GO:0010847 | regulation of chromatin assembly(GO:0010847) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.3 | GO:0031012 | extracellular matrix(GO:0031012) |
0.2 | 1.5 | GO:0031258 | lamellipodium membrane(GO:0031258) |
0.0 | 1.5 | GO:0036064 | ciliary basal body(GO:0036064) |
0.1 | 1.4 | GO:0000220 | vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220) |
0.1 | 1.4 | GO:0005849 | mRNA cleavage factor complex(GO:0005849) |
0.2 | 1.2 | GO:0033557 | Slx1-Slx4 complex(GO:0033557) |
0.0 | 1.1 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.0 | 1.0 | GO:0070461 | SAGA-type complex(GO:0070461) |
0.0 | 1.0 | GO:0005811 | lipid particle(GO:0005811) |
0.1 | 0.9 | GO:0031464 | Cul4A-RING E3 ubiquitin ligase complex(GO:0031464) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 17.1 | GO:0035804 | structural constituent of egg coat(GO:0035804) |
0.0 | 5.0 | GO:0030246 | carbohydrate binding(GO:0030246) |
0.4 | 3.1 | GO:0045735 | nutrient reservoir activity(GO:0045735) |
0.1 | 2.3 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.0 | 1.7 | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811) |
0.0 | 1.5 | GO:0005178 | integrin binding(GO:0005178) |
0.2 | 1.4 | GO:0003834 | beta-carotene 15,15'-monooxygenase activity(GO:0003834) carotenoid dioxygenase activity(GO:0010436) |
0.1 | 1.4 | GO:0051117 | ATPase binding(GO:0051117) |
0.2 | 1.2 | GO:0008821 | crossover junction endodeoxyribonuclease activity(GO:0008821) |
0.3 | 1.1 | GO:0050508 | glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity(GO:0050508) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.1 | 1.7 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 1.0 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.0 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 0.9 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 0.8 | PID VEGFR1 2 PATHWAY | Signaling events mediated by VEGFR1 and VEGFR2 |
0.0 | 0.8 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.7 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 0.5 | PID TRAIL PATHWAY | TRAIL signaling pathway |
0.0 | 0.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.7 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 1.4 | REACTOME PROCESSING OF INTRONLESS PRE MRNAS | Genes involved in Processing of Intronless Pre-mRNAs |
0.0 | 0.9 | REACTOME RNA POL I TRANSCRIPTION INITIATION | Genes involved in RNA Polymerase I Transcription Initiation |
0.0 | 0.8 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 0.8 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
0.2 | 0.7 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.1 | 0.5 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.0 | 0.4 | REACTOME FANCONI ANEMIA PATHWAY | Genes involved in Fanconi Anemia pathway |
0.0 | 0.3 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 0.2 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |