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PRJNA195909:zebrafish embryo and larva development
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Results for hinfp
Z-value: 1.60
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Transcription factors associated with hinfp
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| hinfp | dr11_v1_chr5_+_30596477_30596477 | 0.88 | 1.9e-03 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr11_+_6010177 Show fit | 4.29 |
ENSDART00000170047
ENSDART00000022526 ENSDART00000161001 ENSDART00000188999 |
GTP binding protein 3, mitochondrial |
|
| chr9_+_8408054 Show fit | 3.19 |
ENSDART00000144373
|
zgc:153499 |
|
| chr10_-_21362320 Show fit | 2.94 |
ENSDART00000189789
|
avidin |
|
| chr10_-_21362071 Show fit | 2.91 |
ENSDART00000125167
|
avidin |
|
| chr19_+_8612839 Show fit | 2.69 |
ENSDART00000144925
|
sorting nexin family member 27a |
|
| chr13_+_28618086 Show fit | 2.48 |
ENSDART00000087001
|
cyclin and CBS domain divalent metal cation transport mediator 2a |
|
| chr8_+_11687254 Show fit | 2.42 |
ENSDART00000042040
|
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a |
|
| chr4_-_20081621 Show fit | 2.40 |
ENSDART00000024647
|
DENN/MADD domain containing 6B |
|
| chr5_-_63065912 Show fit | 2.38 |
ENSDART00000161149
|
family with sequence similarity 57 member A |
|
| chr9_+_8407778 Show fit | 2.38 |
ENSDART00000102754
ENSDART00000178144 |
zgc:153499 |
Network of associatons between targets according to the STRING database.
First level regulatory network of hinfp
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 6.3 | GO:0002098 | tRNA wobble uridine modification(GO:0002098) |
| 0.0 | 3.8 | GO:0008016 | regulation of heart contraction(GO:0008016) |
| 0.2 | 3.7 | GO:1990126 | retrograde transport, endosome to plasma membrane(GO:1990126) |
| 0.1 | 3.3 | GO:0048013 | negative regulation of Ras protein signal transduction(GO:0046580) ephrin receptor signaling pathway(GO:0048013) |
| 0.0 | 2.6 | GO:0046488 | phosphatidylinositol metabolic process(GO:0046488) |
| 0.2 | 2.5 | GO:0010960 | magnesium ion homeostasis(GO:0010960) |
| 0.6 | 2.4 | GO:2000660 | regulation of interleukin-1-mediated signaling pathway(GO:2000659) negative regulation of interleukin-1-mediated signaling pathway(GO:2000660) |
| 0.0 | 2.4 | GO:0055088 | lipid homeostasis(GO:0055088) |
| 0.2 | 1.7 | GO:1901741 | positive regulation of myoblast fusion(GO:1901741) |
| 0.3 | 1.5 | GO:0033238 | regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 4.9 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
| 0.0 | 3.7 | GO:0005769 | early endosome(GO:0005769) |
| 0.0 | 2.4 | GO:0055037 | recycling endosome(GO:0055037) |
| 0.1 | 1.5 | GO:0016580 | Sin3 complex(GO:0016580) |
| 0.1 | 1.4 | GO:0005675 | holo TFIIH complex(GO:0005675) |
| 0.1 | 1.4 | GO:0032809 | neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298) |
| 0.1 | 1.4 | GO:0030140 | trans-Golgi network transport vesicle(GO:0030140) |
| 0.0 | 1.4 | GO:0005802 | trans-Golgi network(GO:0005802) |
| 0.0 | 1.1 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
| 0.0 | 1.0 | GO:0030131 | clathrin adaptor complex(GO:0030131) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 8.2 | GO:0003924 | GTPase activity(GO:0003924) |
| 1.2 | 5.8 | GO:0009374 | biotin binding(GO:0009374) |
| 0.0 | 5.6 | GO:0030246 | carbohydrate binding(GO:0030246) |
| 0.3 | 4.9 | GO:0008553 | hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553) |
| 0.1 | 3.7 | GO:0032266 | phosphatidylinositol-3-phosphate binding(GO:0032266) |
| 0.1 | 2.6 | GO:0016307 | phosphatidylinositol phosphate kinase activity(GO:0016307) |
| 0.1 | 2.5 | GO:0015095 | magnesium ion transmembrane transporter activity(GO:0015095) |
| 0.1 | 2.4 | GO:0061578 | Lys63-specific deubiquitinase activity(GO:0061578) |
| 0.0 | 1.7 | GO:0004707 | MAP kinase activity(GO:0004707) |
| 0.1 | 1.5 | GO:0015174 | basic amino acid transmembrane transporter activity(GO:0015174) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.4 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
| 0.0 | 0.9 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
| 0.0 | 0.5 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
| 0.1 | 0.4 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.4 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
| 0.0 | 1.4 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
| 0.0 | 1.0 | REACTOME LYSOSOME VESICLE BIOGENESIS | Genes involved in Lysosome Vesicle Biogenesis |
| 0.0 | 0.9 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
| 0.0 | 0.8 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
| 0.0 | 0.7 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
| 0.0 | 0.5 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
| 0.0 | 0.5 | REACTOME TRNA AMINOACYLATION | Genes involved in tRNA Aminoacylation |
| 0.0 | 0.4 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
| 0.0 | 0.2 | REACTOME PRE NOTCH PROCESSING IN GOLGI | Genes involved in Pre-NOTCH Processing in Golgi |