PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
si:ch211-59d15.4 | dr11_v1_chr20_+_9211237_9211237 | -0.49 | 1.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_8671229 Show fit | 2.74 |
ENSDART00000131963
|
ubiquitin specific peptidase 11 |
|
chr24_-_33366188 Show fit | 2.73 |
ENSDART00000074161
|
solute carrier family 4 (anion exchanger), member 2b |
|
chr20_+_35445462 Show fit | 2.54 |
ENSDART00000124497
|
tudor domain containing 6 |
|
chr19_-_7043355 Show fit | 2.29 |
ENSDART00000104845
|
TAP binding protein (tapasin), tandem duplicate 1 |
|
chr25_+_5972690 Show fit | 2.21 |
ENSDART00000067517
|
si:ch211-11i22.4 |
|
chr22_+_23359369 Show fit | 2.14 |
ENSDART00000170886
|
DENN/MADD domain containing 1B |
|
chr3_+_24708685 Show fit | 2.05 |
ENSDART00000153507
|
megakaryoblastic leukemia (translocation) 1a |
|
chr16_+_48714048 Show fit | 1.95 |
ENSDART00000148709
ENSDART00000150121 |
bromodomain containing 2b |
|
chr22_+_26600834 Show fit | 1.94 |
ENSDART00000157411
|
adenylate cyclase 9 |
|
chr15_+_42235449 Show fit | 1.89 |
ENSDART00000114801
ENSDART00000182053 |
sphingosine-1-phosphate phosphatase 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.4 | GO:0030433 | ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) |
0.0 | 2.7 | GO:0016579 | protein deubiquitination(GO:0016579) |
0.2 | 2.6 | GO:0016973 | poly(A)+ mRNA export from nucleus(GO:0016973) |
0.2 | 2.5 | GO:0030719 | P granule organization(GO:0030719) |
0.2 | 2.3 | GO:0002483 | antigen processing and presentation of endogenous peptide antigen(GO:0002483) antigen processing and presentation of endogenous antigen(GO:0019883) antigen processing and presentation of endogenous peptide antigen via MHC class I(GO:0019885) |
0.1 | 2.2 | GO:0051639 | actin filament network formation(GO:0051639) |
0.2 | 2.1 | GO:0050957 | equilibrioception(GO:0050957) |
0.0 | 2.1 | GO:0032456 | endocytic recycling(GO:0032456) |
0.1 | 1.9 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.1 | 1.9 | GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | GO:0000151 | ubiquitin ligase complex(GO:0000151) |
0.0 | 3.0 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 3.0 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.0 | 2.8 | GO:0031227 | intrinsic component of endoplasmic reticulum membrane(GO:0031227) |
0.1 | 2.6 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.8 | 2.5 | GO:0033391 | chromatoid body(GO:0033391) |
0.0 | 2.3 | GO:0031941 | filamentous actin(GO:0031941) |
0.0 | 2.2 | GO:0032587 | ruffle membrane(GO:0032587) |
0.3 | 1.7 | GO:0000811 | GINS complex(GO:0000811) |
0.1 | 1.7 | GO:0005579 | membrane attack complex(GO:0005579) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | GO:0015301 | anion:anion antiporter activity(GO:0015301) |
0.0 | 2.9 | GO:0003724 | RNA helicase activity(GO:0003724) |
0.0 | 2.7 | GO:0004843 | thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005) |
0.4 | 2.5 | GO:0034450 | ubiquitin-ubiquitin ligase activity(GO:0034450) |
0.1 | 2.5 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 2.3 | GO:0004016 | adenylate cyclase activity(GO:0004016) |
0.1 | 2.1 | GO:0031624 | ubiquitin conjugating enzyme binding(GO:0031624) |
0.1 | 1.9 | GO:0019894 | kinesin binding(GO:0019894) |
0.1 | 1.9 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.1 | 1.6 | GO:0035612 | AP-2 adaptor complex binding(GO:0035612) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.5 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.1 | 1.7 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.4 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 0.9 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.1 | 0.8 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 0.8 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 0.7 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 0.7 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 0.5 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 0.5 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.1 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 2.7 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.1 | 2.7 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.2 | 2.5 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.2 | 2.5 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |
0.1 | 1.9 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 1.3 | REACTOME KERATAN SULFATE BIOSYNTHESIS | Genes involved in Keratan sulfate biosynthesis |
0.1 | 0.9 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.0 | 0.9 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
0.0 | 0.9 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |