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PRJNA195909:zebrafish embryo and larva development

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Results for ebf1b

Z-value: 0.44

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Transcription factors associated with ebf1b

Gene Symbol Gene ID Gene Info
ENSDARG00000069196 EBF transcription factor 1b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ebf1bdr11_v1_chr21_-_33851877_338518770.891.2e-03Click!

Activity profile of ebf1b motif

Sorted Z-values of ebf1b motif

Promoter Log-likelihood Transcript Gene Gene Info
chr13_-_16226312 0.84 ENSDART00000163952
zgc:110045
chr9_-_22318511 0.78 ENSDART00000129295
crystallin, gamma M2d2
chr9_+_22080122 0.69 ENSDART00000065956
ENSDART00000136014
crystallin, gamma M2e
chr21_+_26389391 0.68 ENSDART00000077197
thymosin, beta
chr24_-_28893251 0.68 ENSDART00000042065
ENSDART00000003503
collagen, type XI, alpha 1a
chr5_+_36932718 0.57 ENSDART00000037879
cone-rod homeobox
chr20_+_34933183 0.56 ENSDART00000062738
synaptosomal-associated protein, 25a
chr13_-_39159810 0.52 ENSDART00000131508
collagen, type IX, alpha 1b
chr8_+_31872992 0.50 ENSDART00000146933
complement component 7a
chr13_-_39160018 0.46 ENSDART00000168795
collagen, type IX, alpha 1b
chr22_+_28446365 0.44 ENSDART00000189359
ABI family, member 3 (NESH) binding protein b
chr9_-_22831836 0.44 ENSDART00000142585
nebulin
chr4_-_10599062 0.43 ENSDART00000048003
tetraspanin 12
chr23_-_21471022 0.41 ENSDART00000104206
hairy-related 4, tandem duplicate 2
chr10_-_29101715 0.40 ENSDART00000149674
ENSDART00000171194
ENSDART00000192019
si:ch211-103f14.3
chr1_-_9114936 0.38 ENSDART00000163624
ENSDART00000132910
si:ch211-14k19.8
vascular associated protein
chr21_-_19018455 0.38 ENSDART00000080256
neurofilament, medium polypeptide a
chr7_-_52558495 0.36 ENSDART00000138263
ENSDART00000009938
ENSDART00000174292
ENSDART00000174218
ENSDART00000174335
transcription factor 12
chr1_-_44701313 0.34 ENSDART00000193926
si:dkey-28b4.8
chr10_+_21650828 0.31 ENSDART00000160754
protocadherin 1 gamma 1
chr16_-_21785261 0.30 ENSDART00000078858
si:ch73-86n18.1
chr10_+_19554604 0.29 ENSDART00000063806
ATPase H+ transporting V1 subunit B2
chr14_-_16328331 0.29 ENSDART00000111262
protocadherin 12
chr23_+_20931030 0.28 ENSDART00000167014
paired box 7b
chr11_+_41981959 0.27 ENSDART00000055707
hairy and enhancer of split-related 15, tandem duplicate 1
chr7_+_58686860 0.26 ENSDART00000052332
proenkephalin b
chr20_+_48782068 0.26 ENSDART00000159275
NK2 homeobox 2b
chr25_+_25453571 0.26 ENSDART00000112330
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7a
chr24_-_25691020 0.24 ENSDART00000015391
cholinergic receptor, nicotinic, delta (muscle)
chr19_+_19756425 0.24 ENSDART00000167606
homeobox A3a
chr23_-_31506854 0.23 ENSDART00000131352
ENSDART00000138625
ENSDART00000133002
EYA transcriptional coactivator and phosphatase 4
chr25_-_13105310 0.22 ENSDART00000172269
sphingomyelin phosphodiesterase 3, neutral
chr4_+_76745015 0.20 ENSDART00000155883
membrane-spanning 4-domains, subfamily A, member 17A.10
chr25_+_31323978 0.19 ENSDART00000067030
lymphocyte-specific protein 1
chr11_+_25638172 0.19 ENSDART00000114226
ENSDART00000143677
glutamate receptor, metabotropic 6b
chr4_+_11375894 0.19 ENSDART00000190471
ENSDART00000143963
piccolo presynaptic cytomatrix protein a
chr7_+_66822229 0.19 ENSDART00000112109
lymphatic vessel endothelial hyaluronic receptor 1a
chr13_+_1439152 0.18 ENSDART00000159047
si:ch211-165e15.1
chr4_+_13810811 0.17 ENSDART00000067168
PDZ domain containing ring finger 4
chr9_-_34296406 0.17 ENSDART00000125451
immunoglobulin-like domain containing receptor 2
chr19_-_26863626 0.17 ENSDART00000145568
proline-rich transmembrane protein 1
chr6_-_30863046 0.16 ENSDART00000155330
phosphodiesterase 4B, cAMP-specific a
chr24_+_36705855 0.15 ENSDART00000147281
si:ch73-334d15.2
chr7_-_52842007 0.15 ENSDART00000182710
microtubule-associated protein 1Aa
chr19_-_13733870 0.14 ENSDART00000177773
erythrocyte membrane protein band 4.1a
chr12_+_13652747 0.14 ENSDART00000066359
5-oxoprolinase, ATP-hydrolysing
chr7_+_54617060 0.14 ENSDART00000158898
fibroblast growth factor 4
chr9_+_44430974 0.13 ENSDART00000056846
protein phosphatase 1, regulatory (inhibitor) subunit 1C
chr6_+_58406014 0.13 ENSDART00000044241
potassium voltage-gated channel, KQT-like subfamily, member 2b
chr24_-_12749116 0.13 ENSDART00000093583
COX19 cytochrome c oxidase assembly factor
chr23_+_40460333 0.12 ENSDART00000184658
SOGA family member 3b
chr10_+_33982010 0.12 ENSDART00000180431
furry homolog b (Drosophila)
chr25_+_21324588 0.12 ENSDART00000151842
leucine rich repeat neuronal 3a
chr14_-_2196267 0.12 ENSDART00000161674
ENSDART00000125674
protocadherin 2 alpha b 8
protocadherin 2 alpha b 9
chr23_+_26946744 0.12 ENSDART00000115141
calcium channel, voltage-dependent, beta 3b
chr15_+_5321612 0.12 ENSDART00000174345
odorant receptor, family A, subfamily 113, member 1
chr19_-_25519310 0.12 ENSDART00000089882
si:dkey-202e17.1
chr7_-_61845282 0.11 ENSDART00000182586
HtrA serine peptidase 3
chr10_-_27196093 0.11 ENSDART00000185282
autism susceptibility candidate 2a
chr2_+_5371492 0.11 ENSDART00000139762
si:ch1073-184j22.1
chr13_+_17702853 0.11 ENSDART00000145438
si:dkey-27m7.4
chr21_+_16144014 0.11 ENSDART00000163267
pyroglutamylated RFamide peptide receptor 4
chr3_-_3496738 0.10 ENSDART00000186849

chr18_+_50276653 0.10 ENSDART00000192120
si:dkey-105e17.1
chr6_+_39370587 0.10 ENSDART00000157165
ENSDART00000155079
si:dkey-195m11.8
chr8_-_13211527 0.10 ENSDART00000090541
si:ch73-61d6.3
chr5_-_42083363 0.10 ENSDART00000162596
chemokine (C-X-C motif) ligand 11, duplicate 5
chr9_+_44431174 0.10 ENSDART00000149726
protein phosphatase 1, regulatory (inhibitor) subunit 1C
chr11_-_31039533 0.10 ENSDART00000127355
immediate early response 2b
chr22_-_30881738 0.10 ENSDART00000059965
si:dkey-49n23.1
chr2_+_22495274 0.09 ENSDART00000167915
leucine rich repeat containing 8 VRAC subunit Da
chr11_+_3575963 0.09 ENSDART00000077305
si:dkey-33m11.8
chr23_-_6920107 0.09 ENSDART00000149230
ENSDART00000182946
si:ch211-117c9.2
chr12_-_35787801 0.09 ENSDART00000171682
apoptosis-associated tyrosine kinase b
chr11_+_8660158 0.09 ENSDART00000169141
transducin (beta)-like 1 X-linked receptor 1a
chr18_+_50276337 0.09 ENSDART00000140352
si:dkey-105e17.1
chr16_-_33076764 0.09 ENSDART00000192917
dopey family member 1
chr13_+_17702522 0.09 ENSDART00000057913
si:dkey-27m7.4
chr21_-_11791909 0.08 ENSDART00000180893
si:dkey-6b12.5
chr3_-_30158395 0.08 ENSDART00000103502
si:ch211-152f23.5
chr23_+_26946429 0.08 ENSDART00000185564
calcium channel, voltage-dependent, beta 3b
chr21_+_21685228 0.08 ENSDART00000142844
odorant receptor, family E, subfamily 125, member 4
chr1_-_16394814 0.08 ENSDART00000013024
fibroblast growth factor 20a
chr2_-_43130812 0.08 ENSDART00000039079
ENSDART00000056162
finTRIM family, member 13
chr1_-_50438247 0.08 ENSDART00000114098
dickkopf WNT signaling pathway inhibitor 2
chr6_-_8399486 0.08 ENSDART00000189496
prostaglandin E receptor 1a (subtype EP1)
chr1_-_35924495 0.08 ENSDART00000184424
SMAD family member 1
chr4_+_20318127 0.08 ENSDART00000028856
ENSDART00000132909
calcium channel, voltage-dependent, L type, alpha 1C subunit
chr8_+_30671060 0.07 ENSDART00000193749
adenosine A2a receptor a
chr22_-_28373698 0.07 ENSDART00000157592
si:ch211-213c4.5
chr1_-_46989650 0.07 ENSDART00000129072
ENSDART00000150507
si:dkey-22n8.3
chr15_-_39819877 0.07 ENSDART00000142719
ENSDART00000139465
roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr8_+_22916536 0.07 ENSDART00000136403
calcium channel, voltage-dependent, L type, alpha 1F subunit
chr7_-_34265481 0.07 ENSDART00000173596
si:ch211-98n17.5
chr5_-_66296635 0.07 ENSDART00000125993
prolactin receptor b
chr25_+_4960509 0.07 ENSDART00000155984
si:ch73-265h17.4
chr7_+_25920792 0.07 ENSDART00000026295
arrestin, beta 2b
chr12_+_23812530 0.06 ENSDART00000066331
supervillin a
chr11_+_22134540 0.06 ENSDART00000190502
si:dkey-91m3.1
chr22_+_567733 0.06 ENSDART00000171036
ubiquitin specific peptidase 49
chr3_+_32691275 0.06 ENSDART00000191838
si:dkey-16l2.17
chr8_-_3716734 0.05 ENSDART00000172966
BICD family like cargo adaptor 1
chr14_-_32405387 0.05 ENSDART00000184647
fibroblast growth factor 13a
chr5_+_9360394 0.05 ENSDART00000124642

chr18_-_19095141 0.05 ENSDART00000090962
ENSDART00000090922
DENN/MADD domain containing 4A
chr2_-_37896646 0.05 ENSDART00000075931
hexose-binding lectin 1
chr4_+_74255904 0.05 ENSDART00000174385
protein tyrosine phosphatase, receptor type, r
chr23_-_5032587 0.05 ENSDART00000163903
potassium voltage-gated channel, shaker-related subfamily, member 2b
chr23_-_19230627 0.05 ENSDART00000007122
guanylate cyclase activator 1B
chr14_-_21959712 0.04 ENSDART00000021417
purinergic receptor P2X, ligand-gated ion channel, 3a
chr12_-_36070473 0.04 ENSDART00000165720
G protein-coupled receptor 142
chr15_+_5299404 0.04 ENSDART00000155410
odorant receptor, family E, subfamily 122, member 2
chr11_+_31558207 0.04 ENSDART00000140204
egl-9 family hypoxia-inducible factor 1b
chr14_+_25817246 0.04 ENSDART00000136733
glycine receptor, alpha 1
chr8_-_34762163 0.04 ENSDART00000114080
SET domain containing 1B, b
chr12_-_11560794 0.04 ENSDART00000149098
ENSDART00000169975
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b
chr12_-_46176115 0.04 ENSDART00000152848
si:ch211-226h7.8
chr16_+_12281032 0.04 ENSDART00000138638
si:dkey-26c10.5
chr18_-_7112882 0.04 ENSDART00000176292
si:dkey-88e18.8
chr18_+_20871142 0.04 ENSDART00000188274
pyroglutamyl-peptidase I-like
chr24_-_39826865 0.04 ENSDART00000089232
solute carrier family 12 (potassium/chloride transporter), member 7b
chr18_+_33580391 0.04 ENSDART00000189300
si:dkey-47k20.4
chr9_-_45149695 0.03 ENSDART00000162033

chr3_-_38783951 0.03 ENSDART00000155518
zinc finger protein 281a
chr24_-_25184553 0.03 ENSDART00000166917
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr14_-_26094172 0.03 ENSDART00000150131
melatonin receptor type 1A like
chr3_+_62317990 0.03 ENSDART00000058719
zinc finger protein 1124
chr4_-_5019113 0.03 ENSDART00000189321
ENSDART00000081990
striatin interacting protein 2
chr2_-_32457919 0.02 ENSDART00000132792
ENSDART00000041319
solute carrier family 4 (anion exchanger), member 2a
chr10_+_45059702 0.02 ENSDART00000166945
NudC domain containing 3
chr25_-_13549577 0.02 ENSDART00000166772
anoctamin 10b
chr3_+_36160979 0.02 ENSDART00000038525
si:ch211-234h8.7
chr10_-_9115383 0.02 ENSDART00000139324
si:dkeyp-41f9.3
chr10_-_31563049 0.02 ENSDART00000023575
roundabout, axon guidance receptor, homolog 3 (Drosophila)
chrM_+_3803 0.02 ENSDART00000093596
NADH dehydrogenase 1, mitochondrial
chr7_-_32599669 0.02 ENSDART00000173752
potassium voltage-gated channel, shaker-related subfamily, member 4
chr15_+_5339056 0.02 ENSDART00000174319

chr12_-_11306766 0.02 ENSDART00000036989
golgi to ER traffic protein 4 homolog (S. cerevisiae)
chr13_-_40120252 0.02 ENSDART00000157852
cartilage acidic protein 1b
chr22_-_7809904 0.02 ENSDART00000182269
ENSDART00000097201
ENSDART00000138522
si:ch73-44m9.3
si:ch73-44m9.1
chr4_+_17336557 0.02 ENSDART00000111650
pro-melanin-concentrating hormone
chr11_-_40128722 0.02 ENSDART00000165781
family with sequence similarity 83, member E
chr17_-_24364527 0.02 ENSDART00000155192
WD repeat containing planar cell polarity effector
chr21_-_2273244 0.01 ENSDART00000171417
si:ch73-299h12.3
chr5_+_457729 0.01 ENSDART00000025183
intraflagellar transport 74
chr15_+_11427620 0.01 ENSDART00000168688
NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2
chr8_-_52557455 0.01 ENSDART00000163596
si:ch73-199g24.2
chr21_-_7687544 0.01 ENSDART00000134519
phosphodiesterase 8B
chr8_+_37527575 0.01 ENSDART00000147239
odorant receptor, family H, subfamily 135, member 1
chr25_+_35020529 0.01 ENSDART00000158016
filamin C, gamma a (actin binding protein 280)
chr20_-_46467280 0.01 ENSDART00000060702
regulator of microtubule dynamics 3
chr16_-_14534724 0.01 ENSDART00000148126
si:dkey-237j11.3
chr7_-_41693004 0.00 ENSDART00000121509
MAM and LDL receptor class A domain containing 1
chr16_-_25535430 0.00 ENSDART00000077420
dystrobrevin binding protein 1a
chr12_+_25945560 0.00 ENSDART00000109799
multimerin 2b
chr24_+_3050020 0.00 ENSDART00000004241
inhibin, beta Aa

Network of associatons between targets according to the STRING database.

First level regulatory network of ebf1b

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0043152 induction of bacterial agglutination(GO:0043152)
0.1 0.4 GO:0071691 cardiac muscle thin filament assembly(GO:0071691)
0.1 0.4 GO:0060052 neurofilament cytoskeleton organization(GO:0060052)
0.1 0.3 GO:0050938 regulation of xanthophore differentiation(GO:0050938)
0.0 0.4 GO:1902547 regulation of vascular endothelial growth factor signaling pathway(GO:1900746) regulation of cellular response to vascular endothelial growth factor stimulus(GO:1902547)
0.0 0.2 GO:0060017 parathyroid gland development(GO:0060017)
0.0 0.2 GO:0016576 histone dephosphorylation(GO:0016576) negative regulation of signal transduction in absence of ligand(GO:1901099) regulation of extrinsic apoptotic signaling pathway in absence of ligand(GO:2001239) negative regulation of extrinsic apoptotic signaling pathway in absence of ligand(GO:2001240)
0.0 0.2 GO:1904071 presynaptic active zone assembly(GO:1904071)
0.0 0.1 GO:0061469 regulation of type B pancreatic cell proliferation(GO:0061469)
0.0 0.6 GO:0016082 synaptic vesicle priming(GO:0016082)
0.0 0.5 GO:0019835 cytolysis(GO:0019835)
0.0 0.1 GO:0038083 peptidyl-tyrosine autophosphorylation(GO:0038083)
0.0 0.1 GO:0038161 prolactin signaling pathway(GO:0038161)
0.0 0.4 GO:0042541 hemoglobin biosynthetic process(GO:0042541)
0.0 0.1 GO:0060300 regulation of cytokine activity(GO:0060300) regulation of receptor binding(GO:1900120) regulation of chemokine activity(GO:1900136)
0.0 0.2 GO:0050962 detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962)
0.0 0.2 GO:0061300 cerebellum vasculature development(GO:0061300)
0.0 0.1 GO:0043029 T cell homeostasis(GO:0043029)
0.0 0.1 GO:0055107 Golgi to secretory granule transport(GO:0055107)
0.0 0.3 GO:0048936 peripheral nervous system neuron axonogenesis(GO:0048936)
0.0 0.3 GO:0033505 floor plate formation(GO:0021508) floor plate morphogenesis(GO:0033505)
0.0 1.5 GO:0002088 lens development in camera-type eye(GO:0002088)
0.0 0.6 GO:0042462 eye photoreceptor cell development(GO:0042462)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:0070032 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex(GO:0070032)
0.1 0.4 GO:0005883 neurofilament(GO:0005883)
0.0 0.5 GO:0005579 membrane attack complex(GO:0005579)
0.0 0.2 GO:0005892 acetylcholine-gated channel complex(GO:0005892)
0.0 0.2 GO:0098982 GABA-ergic synapse(GO:0098982)
0.0 0.1 GO:0043194 axon initial segment(GO:0043194)
0.0 1.7 GO:0005581 collagen trimer(GO:0005581)
0.0 0.3 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.3 GO:0033017 sarcoplasmic reticulum membrane(GO:0033017)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.2 GO:0001642 group III metabotropic glutamate receptor activity(GO:0001642)
0.0 0.4 GO:0042813 Wnt-activated receptor activity(GO:0042813)
0.0 0.1 GO:0031701 angiotensin receptor binding(GO:0031701)
0.0 0.3 GO:0031628 opioid receptor binding(GO:0031628)
0.0 0.3 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 1.5 GO:0005212 structural constituent of eye lens(GO:0005212)
0.0 0.1 GO:0004925 prolactin receptor activity(GO:0004925)
0.0 0.2 GO:0004767 sphingomyelin phosphodiesterase activity(GO:0004767)
0.0 0.1 GO:0039706 co-receptor binding(GO:0039706)
0.0 0.1 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.6 GO:0017075 syntaxin-1 binding(GO:0017075)
0.0 0.1 GO:0004960 thromboxane receptor activity(GO:0004960)
0.0 0.0 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.0 0.1 GO:0001609 G-protein coupled adenosine receptor activity(GO:0001609)
0.0 0.2 GO:0098882 structural constituent of presynaptic active zone(GO:0098882)
0.0 0.2 GO:0022848 acetylcholine-gated cation channel activity(GO:0022848)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID P38 MK2 PATHWAY p38 signaling mediated by MAPKAP kinases

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1 Genes involved in Signaling by activated point mutants of FGFR1
0.0 0.2 REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS Genes involved in Presynaptic nicotinic acetylcholine receptors
0.0 0.3 REACTOME INSULIN RECEPTOR RECYCLING Genes involved in Insulin receptor recycling
0.0 0.4 REACTOME STRIATED MUSCLE CONTRACTION Genes involved in Striated Muscle Contraction
0.0 0.1 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation