PRJNA195909:zebrafish embryo and larva development
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ctcf | dr11_v1_chr18_+_22287084_22287188 | 0.97 | 1.6e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_2270069 Show fit | 7.41 |
ENSDART00000189005
|
zinc finger protein 740a |
|
chr5_+_55984270 Show fit | 6.65 |
ENSDART00000047358
ENSDART00000138191 |
FK506 binding protein 6 |
|
chr22_-_28777557 Show fit | 6.34 |
ENSDART00000135214
ENSDART00000131761 ENSDART00000005112 |
si:dkeyp-34c12.1 |
|
chr16_-_24642814 Show fit | 5.45 |
ENSDART00000153987
ENSDART00000154319 |
FXYD domain containing ion transport regulator 6 like |
|
chr6_-_8704702 Show fit | 5.42 |
ENSDART00000064149
|
nucleic acid binding protein 1b |
|
chr16_+_28881235 Show fit | 4.95 |
ENSDART00000146525
|
chromatin target of PRMT1b |
|
chr14_-_41468892 Show fit | 4.94 |
ENSDART00000173099
ENSDART00000003170 |
MID1 interacting protein 1, like |
|
chr8_+_37749263 Show fit | 4.46 |
ENSDART00000108556
ENSDART00000147942 |
nucleophosmin/nucleoplasmin, 2a |
|
chr25_+_5972690 Show fit | 4.31 |
ENSDART00000067517
|
si:ch211-11i22.4 |
|
chr21_-_21514176 Show fit | 4.15 |
ENSDART00000031205
|
nectin cell adhesion molecule 3b |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 6.7 | GO:0034587 | piRNA metabolic process(GO:0034587) |
0.1 | 6.6 | GO:0006334 | nucleosome assembly(GO:0006334) |
0.0 | 6.2 | GO:0006338 | chromatin remodeling(GO:0006338) |
0.1 | 5.4 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.3 | 5.2 | GO:0035493 | SNARE complex assembly(GO:0035493) |
0.1 | 5.2 | GO:0010212 | response to ionizing radiation(GO:0010212) |
0.9 | 5.1 | GO:0035092 | spermatid nucleus differentiation(GO:0007289) sperm chromatin condensation(GO:0035092) spermatogenesis, exchange of chromosomal proteins(GO:0035093) |
0.2 | 5.1 | GO:0070936 | protein K48-linked ubiquitination(GO:0070936) |
0.2 | 5.0 | GO:0007286 | spermatid development(GO:0007286) |
0.1 | 4.9 | GO:0046890 | regulation of lipid biosynthetic process(GO:0046890) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.1 | GO:0030659 | cytoplasmic vesicle membrane(GO:0030659) |
0.0 | 7.6 | GO:0005819 | spindle(GO:0005819) |
0.1 | 6.7 | GO:0030173 | integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228) |
0.1 | 6.6 | GO:0016592 | mediator complex(GO:0016592) |
0.3 | 6.0 | GO:0000784 | telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783) nuclear chromosome, telomeric region(GO:0000784) |
0.9 | 5.4 | GO:0070876 | SOSS complex(GO:0070876) |
1.3 | 5.1 | GO:1990111 | spermatoproteasome complex(GO:1990111) |
0.0 | 5.1 | GO:0000786 | nucleosome(GO:0000786) |
0.0 | 4.2 | GO:0043296 | apical junction complex(GO:0043296) |
0.0 | 3.8 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 19.4 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.0 | 11.5 | GO:0005085 | guanyl-nucleotide exchange factor activity(GO:0005085) |
0.0 | 6.6 | GO:0000989 | transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712) |
0.1 | 6.0 | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity(GO:0003755) |
0.2 | 5.4 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.5 | 5.1 | GO:0016504 | peptidase activator activity(GO:0016504) |
0.0 | 5.1 | GO:0000149 | SNARE binding(GO:0000149) |
0.0 | 4.6 | GO:0008168 | methyltransferase activity(GO:0008168) |
1.5 | 4.5 | GO:0071532 | ankyrin repeat binding(GO:0071532) |
0.0 | 4.2 | GO:0050839 | cell adhesion molecule binding(GO:0050839) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.6 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.1 | 7.1 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.1 | 3.9 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.1 | 3.7 | PID MET PATHWAY | Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) |
0.1 | 3.5 | PID VEGFR1 2 PATHWAY | Signaling events mediated by VEGFR1 and VEGFR2 |
0.1 | 3.5 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 3.5 | PID AVB3 INTEGRIN PATHWAY | Integrins in angiogenesis |
0.1 | 2.7 | PID AURORA A PATHWAY | Aurora A signaling |
0.3 | 2.5 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.1 | 2.5 | PID TNF PATHWAY | TNF receptor signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 7.1 | REACTOME FANCONI ANEMIA PATHWAY | Genes involved in Fanconi Anemia pathway |
0.1 | 6.9 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.4 | 6.7 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.4 | 6.0 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.1 | 4.4 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.2 | 3.8 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.3 | 3.5 | REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the late endosome membrane |
0.3 | 3.1 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.1 | 3.1 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.1 | 3.0 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |