Project

PRJNA195909:zebrafish embryo and larva development

Navigation
Downloads

Results for cdx1a+cdx1b

Z-value: 1.00

Motif logo

Transcription factors associated with cdx1a+cdx1b

Gene Symbol Gene ID Gene Info
ENSDARG00000114554 caudal type homeobox 1a
ENSDARG00000116139 caudal type homeobox 1 b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
cdx1bdr11_v1_chr21_-_43992027_43992027-0.809.5e-03Click!
cdx1adr11_v1_chr14_+_3287740_32877400.108.0e-01Click!

Activity profile of cdx1a+cdx1b motif

Sorted Z-values of cdx1a+cdx1b motif

Promoter Log-likelihood Transcript Gene Gene Info
chr24_-_9997948 2.17 ENSDART00000136274
si:ch211-146l10.7
chr10_-_21545091 1.75 ENSDART00000029122
ENSDART00000132207
zgc:165539
chr14_+_34490445 1.72 ENSDART00000132193
ENSDART00000148044
wingless-type MMTV integration site family, member 8a
chr24_-_10014512 1.71 ENSDART00000124341
ENSDART00000191630
zgc:171474
chr21_+_20396858 1.61 ENSDART00000003299
ENSDART00000146615
zgc:103482
chr24_-_10006158 1.41 ENSDART00000106244
zgc:171750
chr3_+_49074008 1.39 ENSDART00000168864
zgc:112146
chr20_-_43741159 1.30 ENSDART00000192621
si:dkeyp-50f7.2
chr14_-_36345175 1.17 ENSDART00000077823
info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a
chr16_-_16225260 1.12 ENSDART00000165790
granulito
chr25_-_29074064 1.12 ENSDART00000165603
AT rich interactive domain 3B (BRIGHT-like)
chr7_+_1473929 1.12 ENSDART00000050687
lysophosphatidylcholine acyltransferase 4
chr1_-_53468160 1.10 ENSDART00000143349
zgc:66455
chr1_-_9485939 1.06 ENSDART00000157814
mical-like 2b
chr5_-_37881345 1.05 ENSDART00000084819
Rho GTPase activating protein 35b
chr11_-_25257045 1.01 ENSDART00000130477
snail family zinc finger 1a
chr23_-_18030399 1.01 ENSDART00000136967
peptidase M20 domain containing 1, tandem duplicate 1
chr1_-_9249943 1.00 ENSDART00000055011
zgc:136472
chr10_+_40321067 0.98 ENSDART00000109816
glycolipid transfer protein b
chr13_-_25719628 0.98 ENSDART00000135383
si:dkey-192p21.6
chr15_+_44093286 0.97 ENSDART00000114352
zgc:112998
chr1_-_9486214 0.97 ENSDART00000137821
mical-like 2b
chr14_+_32918172 0.95 ENSDART00000182867
ligand of numb-protein X 2b
chr2_+_35733335 0.94 ENSDART00000113489
RAS protein activator like 2
chr17_-_30652738 0.93 ENSDART00000154960
SH3 and SYLF domain containing 1
chr9_+_22782027 0.91 ENSDART00000090816
replication timing regulatory factor 1
chr22_-_10440688 0.90 ENSDART00000111962
nucleolar protein 8
chr11_-_25257595 0.88 ENSDART00000123567
snail family zinc finger 1a
chr20_-_49889111 0.87 ENSDART00000058858
kinesin family member 13Bb
chr15_+_22390076 0.84 ENSDART00000183764
OAF homolog a (Drosophila)
chr3_-_29910547 0.81 ENSDART00000151501
si:dkey-151m15.5
chr2_+_23039041 0.79 ENSDART00000056921
casein kinase 1, gamma 2a
chr6_-_25165693 0.77 ENSDART00000167259
zinc finger protein 326
chr3_-_60589292 0.76 ENSDART00000157822
jumonji domain containing 6
chr25_+_9013342 0.75 ENSDART00000154207
ENSDART00000153705
im:7145024
chr7_-_48263516 0.74 ENSDART00000006619
ENSDART00000142370
ENSDART00000148273
ENSDART00000147968
RNA binding protein with multiple splicing 2b
chr10_+_44700103 0.73 ENSDART00000165999
scavenger receptor class B, member 1
chr5_-_31856681 0.72 ENSDART00000187817
protein kinase N3
chr12_-_31726748 0.72 ENSDART00000153174
serine/arginine-rich splicing factor 2a
chr17_+_43595692 0.72 ENSDART00000156271
cilia and flagella associated protein 99
chr19_-_7033636 0.72 ENSDART00000122815
ENSDART00000123443
ENSDART00000124094
death-domain associated protein
chr21_+_43178831 0.70 ENSDART00000151512
AF4/FMR2 family, member 4
chr16_-_25368048 0.70 ENSDART00000132445
ribosome binding factor A
chr3_-_53091946 0.70 ENSDART00000187297
lysophosphatidic acid receptor 2a
chr1_+_41596099 0.68 ENSDART00000111367
si:dkey-56e3.3
chr5_-_57723929 0.68 ENSDART00000144237
grass carp reovirus (GCRV)-induced gene 2p
chr24_+_26402110 0.66 ENSDART00000133684
si:ch211-230g15.5
chr10_-_1625080 0.66 ENSDART00000137285
nucleoporin 155
chr13_-_17860307 0.65 ENSDART00000135920
ENSDART00000054579
membrane-associated ring finger (C3HC4) 8
chr5_-_36597612 0.64 ENSDART00000031270
ENSDART00000122098
ras homolog gene family, member Gc
chr15_+_29393519 0.64 ENSDART00000193488
ENSDART00000112375
glycerophosphodiester phosphodiesterase domain containing 5b
chr8_+_25959940 0.64 ENSDART00000143011
ENSDART00000140626
si:dkey-72l14.4
chr1_-_14506759 0.64 ENSDART00000057044
si:dkey-194g4.1
chr16_-_17586883 0.63 ENSDART00000017142
mannose-6-phosphate receptor (cation dependent)
chr1_+_2321384 0.63 ENSDART00000157662
FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
chr15_+_11693624 0.63 ENSDART00000193630
ENSDART00000161930
striatin, calmodulin binding protein 4
chr5_+_50913034 0.62 ENSDART00000149787
collagen, type IV, alpha 3 (Goodpasture antigen) binding protein a
chr2_-_9744081 0.62 ENSDART00000097732
dishevelled segment polarity protein 3a
chr6_-_46768040 0.62 ENSDART00000154071
immunoglobulin-like and fibronectin type III domain containing 1, tandem duplicate 2
chr5_-_57289872 0.61 ENSDART00000189893
ENSDART00000050957
fer (fps/fes related) tyrosine kinase
chr22_+_2512154 0.60 ENSDART00000097363
zgc:173726
chr21_-_3700334 0.60 ENSDART00000137844
ATPase phospholipid transporting 8B1
chr12_+_34770531 0.60 ENSDART00000153320
solute carrier family 38, member 10
chr13_-_5252559 0.59 ENSDART00000181652
si:dkey-78p8.1
chr2_-_37458527 0.59 ENSDART00000146820
si:dkey-57k2.7
chr15_-_23936276 0.59 ENSDART00000137569
amyloid beta precursor protein (cytoplasmic tail) binding protein 2
chr11_+_24314148 0.58 ENSDART00000171491
RAS (RAD and GEM)-like GTP-binding 1
chr19_+_40069524 0.56 ENSDART00000151365
ENSDART00000140926
zinc finger, MYM-type 4
chr10_-_15849027 0.56 ENSDART00000184682
tight junction protein 2a (zona occludens 2)
chr5_-_23783739 0.56 ENSDART00000139502
si:ch211-287c22.1
chr2_-_40889465 0.56 ENSDART00000192631
ENSDART00000180824
UDP-glucose glycoprotein glucosyltransferase 1
chr6_-_10863582 0.56 ENSDART00000135454
ENSDART00000133893
ENSDART00000014521
ENSDART00000164342
lunapark, ER junction formation factor
chr14_+_21754521 0.55 ENSDART00000111839
lysine (K)-specific demethylase 2Ab
chr14_+_21755469 0.55 ENSDART00000186326
lysine (K)-specific demethylase 2Ab
chr2_+_22409249 0.55 ENSDART00000182915
zgc:56628
chr23_+_31596441 0.54 ENSDART00000053534
TBP-like 1
chr18_+_14684115 0.54 ENSDART00000108469
spermatogenesis associated 2-like
chr22_+_23430688 0.54 ENSDART00000160457
DENN/MADD domain containing 1B
chr10_+_44699734 0.54 ENSDART00000167952
ENSDART00000158681
ENSDART00000190188
ENSDART00000168276
scavenger receptor class B, member 1
chr17_-_19466319 0.54 ENSDART00000170429
dicer 1, ribonuclease type III
chr4_-_20135919 0.53 ENSDART00000172230
centrosomal protein 83
chr5_-_31857345 0.52 ENSDART00000112546
protein kinase N3
chr13_-_15793585 0.52 ENSDART00000145914
ENSDART00000010286
BCL2 associated athanogene 5
chr7_-_69352424 0.51 ENSDART00000170714
adaptor-related protein complex 1, gamma 1 subunit
chr1_-_13989643 0.51 ENSDART00000191046
E74-like factor 2b (ets domain transcription factor)
chr8_-_39822917 0.50 ENSDART00000067843
zgc:162025
chr5_+_58687541 0.50 ENSDART00000083015
ENSDART00000181902
coiled-coil domain containing 84
chr24_+_30392834 0.50 ENSDART00000162555
dihydropyrimidine dehydrogenase a, tandem duplicate 1
chr2_-_40890004 0.50 ENSDART00000191746
UDP-glucose glycoprotein glucosyltransferase 1
chr6_-_7107868 0.50 ENSDART00000171123
nonhomologous end-joining factor 1
chr14_+_3071110 0.50 ENSDART00000162445
HMG box domain containing 3
chr15_+_834697 0.49 ENSDART00000154861
ENSDART00000160694
si:dkey-7i4.14
zgc:174573
chr3_+_36646054 0.49 ENSDART00000170013
ENSDART00000159948
G1 to S phase transition 1, like
chr5_-_23715861 0.49 ENSDART00000019992
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1
chr5_-_9625459 0.49 ENSDART00000143347
SH2B adaptor protein 3
chr3_+_60589157 0.48 ENSDART00000165367
methyltransferase like 23
chr23_+_43718115 0.47 ENSDART00000149266
ENSDART00000149503
anaphase promoting complex subunit 10
chr10_-_15340362 0.46 ENSDART00000148119
ENSDART00000127277
ENSDART00000154037
ENSDART00000189109
pumilio RNA-binding family member 3
chr12_-_33746111 0.46 ENSDART00000127203
lethal giant larvae homolog 2 (Drosophila)
chr11_-_25461336 0.46 ENSDART00000014945
host cell factor C1a
chr19_+_43822968 0.45 ENSDART00000171041
elongin A
chr12_+_18744610 0.45 ENSDART00000153456
megakaryoblastic leukemia (translocation) 1b
chr16_+_38940758 0.45 ENSDART00000102482
ENSDART00000136215
enhancer of yellow 2 homolog (Drosophila)
chr20_-_29499363 0.45 ENSDART00000152889
ENSDART00000153252
ENSDART00000170972
ENSDART00000166420
ENSDART00000163079
ribonucleotide reductase M2 polypeptide
chr20_+_27087539 0.44 ENSDART00000062094
transmembrane protein 251
chr7_+_73827805 0.44 ENSDART00000109316
zgc:173587
chr16_-_21915223 0.44 ENSDART00000170634
SET domain, bifurcated 1b
chr10_+_15340768 0.44 ENSDART00000046274
ENSDART00000168909
trafficking protein particle complex 13
chr16_+_13993285 0.43 ENSDART00000139130
ENSDART00000130353
si:dkey-85k15.7
farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)
chr14_-_12020653 0.42 ENSDART00000106654
zinc finger protein 711
chr7_-_55454406 0.41 ENSDART00000108646
piezo-type mechanosensitive ion channel component 1
chr22_-_9930079 0.41 ENSDART00000131734
si:dkey-253d23.9
chr4_-_5775507 0.41 ENSDART00000021753
cyclin C
chr12_+_33361948 0.41 ENSDART00000124982
fatty acid synthase
chr9_+_2041535 0.40 ENSDART00000093187
limb and neural patterns a
chr25_-_35047838 0.40 ENSDART00000155060

chr18_+_15876385 0.40 ENSDART00000142527
early endosome antigen 1
chr12_+_20122711 0.40 ENSDART00000184411
mahogunin, ring finger 1a
chr14_+_45028062 0.39 ENSDART00000184717
ENSDART00000185481
ATPase phospholipid transporting 8A1
chr10_+_22510280 0.39 ENSDART00000109070
ENSDART00000182002
ENSDART00000192852
GRB10 interacting GYF protein 1b
chr16_-_17586068 0.39 ENSDART00000138306
ENSDART00000178425
mannose-6-phosphate receptor (cation dependent)
chr15_-_23908605 0.39 ENSDART00000185578
ubiquitin specific peptidase 32
chr13_+_45431660 0.38 ENSDART00000099950
SYF2 pre-mRNA-splicing factor
chr3_-_25490970 0.38 ENSDART00000184651
growth factor receptor-bound protein 2b
chr25_-_27633115 0.38 ENSDART00000131539
hyaluronoglucosaminidase 6
chr1_+_8508753 0.37 ENSDART00000091683
alkB homolog 5, RNA demethylase
chr12_-_48467733 0.37 ENSDART00000153126
ENSDART00000152895
ENSDART00000014190
SEC31 homolog B, COPII coat complex component
chr9_+_32178374 0.36 ENSDART00000078576
coenzyme Q10B
chr17_-_17756344 0.36 ENSDART00000190146
aarF domain containing kinase 1
chr12_+_20552190 0.36 ENSDART00000113224
guanine nucleotide binding protein (G protein), alpha 13a
chr20_-_3390406 0.36 ENSDART00000136987
REV3-like, polymerase (DNA directed), zeta, catalytic subunit
chr10_-_11840353 0.36 ENSDART00000127581
tripartite motif containing 23
chr6_-_23002373 0.36 ENSDART00000037709
ENSDART00000170369
nucleolar protein 11
chr2_+_21128391 0.35 ENSDART00000136814
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b
chr12_+_13205955 0.35 ENSDART00000092906
protein phosphatase 1, catalytic subunit, alpha isozyme b
chr2_+_36112273 0.35 ENSDART00000191315
T-cell receptor alpha joining 35
chr19_+_27970292 0.34 ENSDART00000103887
ENSDART00000145549
mediator complex subunit 10
chr18_-_41160579 0.34 ENSDART00000181480

chr8_+_7737062 0.34 ENSDART00000166712
FYVE, RhoGEF and PH domain containing 1
chr9_-_12886108 0.33 ENSDART00000177283
ankyrin repeat and zinc finger domain containing 1
chr7_-_59589547 0.33 ENSDART00000008554
ENSDART00000101731
La ribonucleoprotein domain family, member 7
chr20_-_2641233 0.33 ENSDART00000145335
ENSDART00000133121
BUB1 mitotic checkpoint serine/threonine kinase
chr15_-_4580763 0.33 ENSDART00000008170
ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
chr10_-_35108683 0.33 ENSDART00000049633
zgc:110006
chr19_-_47571456 0.32 ENSDART00000158071
ENSDART00000165841
ribonucleotide reductase M2 polypeptide
chr16_+_20934353 0.32 ENSDART00000052660
src kinase associated phosphoprotein 2
chr7_+_31120766 0.32 ENSDART00000173703
tight junction protein 1a
chr4_-_13255700 0.32 ENSDART00000162277
ENSDART00000026593
glutamate receptor interacting protein 1
chr25_+_16080181 0.32 ENSDART00000061753
fatty acyl CoA reductase 1
chr16_+_42471455 0.32 ENSDART00000166640
si:ch211-215k15.5
chr10_-_36618674 0.32 ENSDART00000135302
remodeling and spacing factor 1b, tandem duplicate 1
chr15_-_23908779 0.31 ENSDART00000088808
ubiquitin specific peptidase 32
chr11_-_34232906 0.31 ENSDART00000162150
large 60S subunit nuclear export GTPase 1
chr11_+_12052791 0.31 ENSDART00000158479
si:ch211-156l18.8
chr3_+_22442445 0.31 ENSDART00000190921
WNK lysine deficient protein kinase 4b
chr15_+_42285643 0.30 ENSDART00000152731
SR-related CTD-associated factor 4b
chr24_-_40009446 0.30 ENSDART00000087422
amine oxidase, copper containing 1
chr6_-_37745508 0.30 ENSDART00000078316
non imprinted in Prader-Willi/Angelman syndrome 2 (human)
chr21_-_11970199 0.29 ENSDART00000114524
NOP56 ribonucleoprotein homolog
chr8_-_25033681 0.29 ENSDART00000003493
nuclear transcription factor Y, alpha, like
chr23_+_28092083 0.28 ENSDART00000053958
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a
chr21_+_41468210 0.28 ENSDART00000192287
biorientation of chromosomes in cell division 1
chr16_+_29376751 0.28 ENSDART00000168856
ENSDART00000162502
ENSDART00000050535
ribosomal RNA adenine dimethylase domain containing 1
chr12_+_3262564 0.28 ENSDART00000184264
transmembrane protein 101
chr14_-_31060082 0.27 ENSDART00000111601
ENSDART00000161113
muscleblind-like splicing regulator 3
chr2_-_32366287 0.26 ENSDART00000144758
upstream binding transcription factor, like
chr24_-_24114217 0.26 ENSDART00000160578
zgc:112982
chr12_+_26670778 0.26 ENSDART00000144355
Rho GTPase activating protein 12b
chr6_-_12588044 0.26 ENSDART00000047896
solute carrier family 15 (oligopeptide transporter), member 1b
chr24_+_32592748 0.26 ENSDART00000188256
si:ch211-282b22.1
chr19_-_17304866 0.25 ENSDART00000160433
ENSDART00000190798
ENSDART00000171284
splicing factor 3a, subunit 3
chr20_+_38458084 0.25 ENSDART00000020153
ENSDART00000135912
coenzyme Q8A
chr24_+_26134029 0.25 ENSDART00000185134
teleost multiple tissue opsin b
chr15_+_32423801 0.25 ENSDART00000165591
si:dkey-285b23.3
chr2_-_27975530 0.24 ENSDART00000020367
zgc:56556
chr10_+_27068251 0.24 ENSDART00000012717
EH-domain containing 1b
chr21_+_20356458 0.24 ENSDART00000135816
phosphodiesterase 6B, cGMP-specific, rod, beta
chr22_-_10605045 0.24 ENSDART00000184812
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
chr15_+_32405959 0.24 ENSDART00000177269
si:ch211-162k9.6
chr19_-_10306910 0.24 ENSDART00000151684
U2 small nuclear RNA auxiliary factor 2b
chr13_-_36034582 0.23 ENSDART00000133565
si:dkey-157l19.2
chr3_-_33437796 0.23 ENSDART00000075499
si:dkey-283b1.7
chr2_+_23351454 0.23 ENSDART00000017034
ENSDART00000154645
ring finger protein 2
chr14_-_41272034 0.23 ENSDART00000191709
ENSDART00000074438
centromere protein I
chr22_+_10440991 0.23 ENSDART00000064805
centromere protein P
chr14_+_15495088 0.22 ENSDART00000165765
ENSDART00000188577
si:dkey-203a12.6
chr7_-_7692992 0.22 ENSDART00000192619
aminoadipate aminotransferase
chr22_+_2403068 0.21 ENSDART00000132925
ENSDART00000132569
zgc:112977
chr16_-_27138478 0.21 ENSDART00000147438
transmembrane protein 245
chr19_+_19652439 0.20 ENSDART00000165934
3-hydroxyisobutyrate dehydrogenase a
chr23_-_43718067 0.20 ENSDART00000015777
ATP-binding cassette, sub-family E (OABP), member 1
chr13_+_18520738 0.19 ENSDART00000113952
toll-like receptor 4a, like
chr17_+_49276061 0.19 ENSDART00000059255
zgc:113176
chr16_-_1757521 0.19 ENSDART00000124660
activating signal cointegrator 1 complex subunit 3
chr6_-_13716744 0.18 ENSDART00000111102
chondroitin polymerizing factor b
chr4_-_42014474 0.18 ENSDART00000193544
si:dkey-237m9.1
chr22_-_25043103 0.18 ENSDART00000015512
polymerase (RNA) III (DNA directed) polypeptide F
chr8_+_47571211 0.17 ENSDART00000131460
phospholipase C, eta 2a
chr21_-_39024754 0.17 ENSDART00000056878
tnf receptor-associated factor 4b
chr20_-_34670236 0.17 ENSDART00000033325
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24

Network of associatons between targets according to the STRING database.

First level regulatory network of cdx1a+cdx1b

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0039015 spinal cord anterior/posterior patterning(GO:0021512) cell proliferation involved in pronephros development(GO:0039015) cell proliferation involved in kidney development(GO:0072111)
0.4 1.3 GO:0043654 recognition of apoptotic cell(GO:0043654)
0.3 1.0 GO:1903371 regulation of endoplasmic reticulum tubular network organization(GO:1903371) positive regulation of endoplasmic reticulum tubular network organization(GO:1903373)
0.3 1.0 GO:2000275 regulation of oxidative phosphorylation uncoupler activity(GO:2000275)
0.2 0.7 GO:0090435 protein targeting to nuclear inner membrane(GO:0036228) protein localization to nuclear envelope(GO:0090435)
0.2 0.5 GO:0030423 targeting of mRNA for destruction involved in RNA interference(GO:0030423)
0.2 0.5 GO:0097065 anterior head development(GO:0097065)
0.2 0.7 GO:0002495 antigen processing and presentation of peptide antigen via MHC class II(GO:0002495)
0.2 1.6 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.2 0.6 GO:0038093 Fc receptor signaling pathway(GO:0038093)
0.1 0.7 GO:0051148 smooth muscle cell differentiation(GO:0051145) negative regulation of muscle cell differentiation(GO:0051148)
0.1 1.0 GO:0035627 ceramide transport(GO:0035627)
0.1 0.7 GO:0045647 negative regulation of erythrocyte differentiation(GO:0045647)
0.1 0.4 GO:1901836 regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter(GO:1901836)
0.1 0.6 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.1 0.6 GO:1901842 regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.1 1.2 GO:0045947 negative regulation of translational initiation(GO:0045947)
0.1 0.3 GO:1905072 cardiac jelly development(GO:1905072)
0.1 0.3 GO:1904869 positive regulation of protein localization to nucleus(GO:1900182) regulation of protein localization to Cajal body(GO:1904869) positive regulation of protein localization to Cajal body(GO:1904871)
0.1 1.0 GO:0006622 protein targeting to lysosome(GO:0006622)
0.1 0.5 GO:0006212 uracil catabolic process(GO:0006212) uracil metabolic process(GO:0019860)
0.1 0.4 GO:0035553 oxidative single-stranded RNA demethylation(GO:0035553)
0.1 0.5 GO:0008594 photoreceptor cell morphogenesis(GO:0008594) negative regulation of epithelial to mesenchymal transition(GO:0010719)
0.1 0.4 GO:2000048 activation of phospholipase D activity(GO:0031584) negative regulation of cell-cell adhesion mediated by cadherin(GO:2000048)
0.1 1.9 GO:0008078 mesodermal cell migration(GO:0008078)
0.1 0.6 GO:0090177 establishment of planar polarity of embryonic epithelium(GO:0042249) establishment of planar polarity involved in neural tube closure(GO:0090177) regulation of establishment of planar polarity involved in neural tube closure(GO:0090178) planar cell polarity pathway involved in neural tube closure(GO:0090179)
0.1 0.9 GO:0072383 plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386)
0.1 0.4 GO:0010481 ventriculo bulbo valve development(GO:0003173) epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 0.7 GO:0016578 histone deubiquitination(GO:0016578)
0.1 0.4 GO:0045337 farnesyl diphosphate biosynthetic process(GO:0045337)
0.1 0.3 GO:0016267 O-glycan processing, core 1(GO:0016267)
0.1 0.8 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 1.1 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.3 GO:0070294 renal sodium ion transport(GO:0003096) renal sodium ion absorption(GO:0070294)
0.1 0.3 GO:0046677 response to antibiotic(GO:0046677)
0.1 1.1 GO:0048251 elastic fiber assembly(GO:0048251)
0.0 0.3 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.0 0.3 GO:2001271 negative regulation of execution phase of apoptosis(GO:1900118) regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001270) negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001271)
0.0 0.5 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.0 0.6 GO:0032418 lysosome localization(GO:0032418)
0.0 0.2 GO:0007250 activation of NF-kappaB-inducing kinase activity(GO:0007250)
0.0 2.1 GO:0036269 swimming behavior(GO:0036269)
0.0 0.4 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 0.9 GO:0070936 protein K48-linked ubiquitination(GO:0070936)
0.0 0.9 GO:0090557 establishment of endothelial intestinal barrier(GO:0090557)
0.0 0.2 GO:0031055 chromatin remodeling at centromere(GO:0031055) CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.0 0.2 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.2 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.4 GO:0090308 methylation-dependent chromatin silencing(GO:0006346) positive regulation of chromatin silencing(GO:0031937) regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.0 0.1 GO:0032790 ribosome disassembly(GO:0032790)
0.0 0.4 GO:0043951 negative regulation of cAMP-mediated signaling(GO:0043951)
0.0 1.1 GO:0006482 protein demethylation(GO:0006482) protein dealkylation(GO:0008214)
0.0 0.3 GO:0032515 negative regulation of phosphoprotein phosphatase activity(GO:0032515)
0.0 0.4 GO:0030214 hyaluronan catabolic process(GO:0030214)
0.0 0.3 GO:0006857 oligopeptide transport(GO:0006857)
0.0 0.5 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.5 GO:0008354 germ cell migration(GO:0008354)
0.0 0.5 GO:0031397 negative regulation of protein ubiquitination(GO:0031397)
0.0 0.3 GO:0060999 positive regulation of dendritic spine development(GO:0060999)
0.0 0.5 GO:0033750 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.5 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.4 GO:0090110 cargo loading into COPII-coated vesicle(GO:0090110)
0.0 0.3 GO:0099639 neurotransmitter receptor transport, endosome to postsynaptic membrane(GO:0098887) endosome to plasma membrane protein transport(GO:0099638) neurotransmitter receptor transport, endosome to plasma membrane(GO:0099639)
0.0 0.6 GO:0016601 Rac protein signal transduction(GO:0016601)
0.0 0.7 GO:0007340 acrosome reaction(GO:0007340)
0.0 0.4 GO:0072015 glomerular visceral epithelial cell development(GO:0072015) glomerular epithelial cell development(GO:0072310)
0.0 0.1 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 1.2 GO:0006354 DNA-templated transcription, elongation(GO:0006354)
0.0 0.1 GO:0033313 meiotic cell cycle checkpoint(GO:0033313)
0.0 0.7 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.4 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663)
0.0 0.1 GO:0015809 arginine transport(GO:0015809)
0.0 0.6 GO:0003094 glomerular filtration(GO:0003094)
0.0 0.6 GO:0045332 phospholipid translocation(GO:0045332)
0.0 0.3 GO:0015693 magnesium ion transport(GO:0015693)
0.0 0.5 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.0 0.2 GO:1902254 histone H2A monoubiquitination(GO:0035518) histone H2A-K119 monoubiquitination(GO:0036353) negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator(GO:1902254)
0.0 0.2 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.9 GO:0032200 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.0 1.7 GO:0048024 regulation of mRNA splicing, via spliceosome(GO:0048024)
0.0 0.2 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.1 GO:0045956 positive regulation of calcium ion-dependent exocytosis(GO:0045956) positive regulation of regulated secretory pathway(GO:1903307)
0.0 0.6 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.9 GO:0034504 protein localization to nucleus(GO:0034504)
0.0 0.2 GO:0030206 chondroitin sulfate biosynthetic process(GO:0030206)
0.0 0.3 GO:0000154 rRNA modification(GO:0000154)
0.0 0.2 GO:0098943 positive regulation of synaptic transmission, glutamatergic(GO:0051968) neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943)
0.0 0.3 GO:0046847 filopodium assembly(GO:0046847)
0.0 0.1 GO:0043984 histone H4-K16 acetylation(GO:0043984)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0097189 apoptotic body(GO:0097189)
0.3 1.0 GO:0098826 endoplasmic reticulum tubular network membrane(GO:0098826)
0.2 0.8 GO:0044609 DBIRD complex(GO:0044609)
0.2 0.5 GO:0070578 RISC-loading complex(GO:0070578)
0.2 0.7 GO:0044611 nuclear pore inner ring(GO:0044611)
0.1 0.3 GO:0031213 RSF complex(GO:0031213)
0.1 0.5 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 0.4 GO:0070390 transcription export complex 2(GO:0070390)
0.1 0.7 GO:0032783 ELL-EAF complex(GO:0032783)
0.1 0.5 GO:0030121 AP-1 adaptor complex(GO:0030121)
0.0 0.3 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.1 GO:1990072 TRAPPIII protein complex(GO:1990072)
0.0 0.5 GO:0070449 elongin complex(GO:0070449)
0.0 0.4 GO:0000974 Prp19 complex(GO:0000974)
0.0 0.4 GO:0031526 brush border membrane(GO:0031526)
0.0 0.9 GO:0035102 PRC1 complex(GO:0035102)
0.0 1.2 GO:0097610 cleavage furrow(GO:0032154) cell surface furrow(GO:0097610)
0.0 0.2 GO:0042622 photoreceptor outer segment membrane(GO:0042622)
0.0 0.2 GO:0035517 PR-DUB complex(GO:0035517)
0.0 1.1 GO:0043186 P granule(GO:0043186)
0.0 1.3 GO:0005901 caveola(GO:0005901) plasma membrane raft(GO:0044853)
0.0 0.4 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.2 GO:0089701 U2AF(GO:0089701)
0.0 0.5 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.6 GO:0043596 nuclear replication fork(GO:0043596)
0.0 0.9 GO:0000781 chromosome, telomeric region(GO:0000781)
0.0 0.1 GO:0043198 dendritic shaft(GO:0043198)
0.0 0.8 GO:0032587 ruffle membrane(GO:0032587)
0.0 1.0 GO:0016592 mediator complex(GO:0016592)
0.0 0.3 GO:0015030 Cajal body(GO:0015030)
0.0 0.3 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.0 0.4 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.5 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.1 GO:0072487 MSL complex(GO:0072487)
0.0 0.3 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778) condensed nuclear chromosome, centromeric region(GO:0000780)
0.0 0.9 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0055038 recycling endosome membrane(GO:0055038)
0.0 1.2 GO:0000775 chromosome, centromeric region(GO:0000775)
0.0 1.5 GO:0016607 nuclear speck(GO:0016607)
0.0 1.6 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.7 GO:0031901 early endosome membrane(GO:0031901)
0.0 0.9 GO:0005871 kinesin complex(GO:0005871)
0.0 0.5 GO:0030864 cortical actin cytoskeleton(GO:0030864)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.9 GO:0051059 NF-kappaB binding(GO:0051059)
0.3 1.3 GO:0030169 low-density lipoprotein particle binding(GO:0030169)
0.2 1.1 GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity(GO:0003980)
0.2 1.0 GO:0035620 ceramide transporter activity(GO:0035620) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 1.1 GO:0008190 eukaryotic initiation factor 4E binding(GO:0008190)
0.1 0.4 GO:0004337 dimethylallyltranstransferase activity(GO:0004161) geranyltranstransferase activity(GO:0004337)
0.1 0.5 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296) pre-miRNA binding(GO:0070883)
0.1 0.4 GO:0031752 D5 dopamine receptor binding(GO:0031752)
0.1 0.8 GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.6 GO:0070016 armadillo repeat domain binding(GO:0070016)
0.1 0.5 GO:0002061 uracil binding(GO:0002058) pyrimidine nucleobase binding(GO:0002061) dihydropyrimidine dehydrogenase (NADP+) activity(GO:0017113)
0.1 0.4 GO:1990931 RNA N6-methyladenosine dioxygenase activity(GO:1990931)
0.1 1.0 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.5 GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068)
0.1 1.0 GO:0005537 mannose binding(GO:0005537)
0.1 0.3 GO:0048531 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity(GO:0016263) beta-1,3-galactosyltransferase activity(GO:0048531)
0.1 0.3 GO:0008131 primary amine oxidase activity(GO:0008131)
0.1 2.3 GO:0005109 frizzled binding(GO:0005109)
0.1 0.3 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.5 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 0.2 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.7 GO:0070915 lysophosphatidic acid receptor activity(GO:0070915)
0.0 0.4 GO:0046974 histone methyltransferase activity (H3-K9 specific)(GO:0046974)
0.0 0.2 GO:0001875 lipopolysaccharide receptor activity(GO:0001875)
0.0 1.2 GO:0004698 protein kinase C activity(GO:0004697) calcium-dependent protein kinase C activity(GO:0004698)
0.0 0.3 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.3 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.4 GO:0048039 ubiquinone binding(GO:0048039)
0.0 0.2 GO:0004473 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471) malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.3 GO:0071916 dipeptide transporter activity(GO:0042936) dipeptide transmembrane transporter activity(GO:0071916)
0.0 1.9 GO:0032452 histone demethylase activity(GO:0032452)
0.0 0.8 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.2 GO:0036137 kynurenine-oxoglutarate transaminase activity(GO:0016212) kynurenine aminotransferase activity(GO:0036137)
0.0 0.4 GO:0004415 hyalurononglucosaminidase activity(GO:0004415)
0.0 0.3 GO:0035259 glucocorticoid receptor binding(GO:0035259)
0.0 0.5 GO:0045159 myosin II binding(GO:0045159)
0.0 0.6 GO:0005154 epidermal growth factor receptor binding(GO:0005154)
0.0 0.2 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.0 0.7 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.5 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.7 GO:0042287 MHC protein binding(GO:0042287)
0.0 0.3 GO:0051721 protein phosphatase 2A binding(GO:0051721)
0.0 0.1 GO:0008332 low voltage-gated calcium channel activity(GO:0008332)
0.0 0.2 GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238)
0.0 0.1 GO:0030504 inorganic diphosphate transmembrane transporter activity(GO:0030504)
0.0 0.3 GO:0019870 chloride channel inhibitor activity(GO:0019869) potassium channel inhibitor activity(GO:0019870)
0.0 0.6 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.5 GO:0005246 calcium channel regulator activity(GO:0005246)
0.0 0.2 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.4 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.3 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.7 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.4 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 0.1 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 0.1 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.1 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.0 0.7 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.0 0.5 PID DNA PK PATHWAY DNA-PK pathway in nonhomologous end joining
0.0 1.7 WNT SIGNALING Genes related to Wnt-mediated signal transduction
0.0 0.6 PID RHOA REG PATHWAY Regulation of RhoA activity
0.0 0.6 PID AR TF PATHWAY Regulation of Androgen receptor activity
0.0 0.8 PID E2F PATHWAY E2F transcription factor network
0.0 0.7 PID P73PATHWAY p73 transcription factor network
0.0 0.5 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.0 0.2 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.0 0.3 PID CDC42 REG PATHWAY Regulation of CDC42 activity

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 REACTOME ACYL CHAIN REMODELLING OF PS Genes involved in Acyl chain remodelling of PS
0.1 1.3 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 1.1 REACTOME CALNEXIN CALRETICULIN CYCLE Genes involved in Calnexin/calreticulin cycle
0.1 1.5 REACTOME LYSOSOME VESICLE BIOGENESIS Genes involved in Lysosome Vesicle Biogenesis
0.0 0.3 REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS Genes involved in Signal regulatory protein (SIRP) family interactions
0.0 0.8 REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates
0.0 0.5 REACTOME REGULATION OF KIT SIGNALING Genes involved in Regulation of KIT signaling
0.0 0.4 REACTOME VITAMIN B5 PANTOTHENATE METABOLISM Genes involved in Vitamin B5 (pantothenate) metabolism
0.0 0.5 REACTOME MICRORNA MIRNA BIOGENESIS Genes involved in MicroRNA (miRNA) Biogenesis
0.0 0.3 REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0 0.5 REACTOME CONVERSION FROM APC C CDC20 TO APC C CDH1 IN LATE ANAPHASE Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase
0.0 0.5 REACTOME DEPOSITION OF NEW CENPA CONTAINING NUCLEOSOMES AT THE CENTROMERE Genes involved in Deposition of New CENPA-containing Nucleosomes at the Centromere
0.0 1.0 REACTOME ION TRANSPORT BY P TYPE ATPASES Genes involved in Ion transport by P-type ATPases
0.0 0.7 REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery
0.0 0.3 REACTOME METABOLISM OF POLYAMINES Genes involved in Metabolism of polyamines
0.0 0.4 REACTOME CHOLESTEROL BIOSYNTHESIS Genes involved in Cholesterol biosynthesis
0.0 0.2 REACTOME TRYPTOPHAN CATABOLISM Genes involved in Tryptophan catabolism
0.0 0.2 REACTOME CGMP EFFECTS Genes involved in cGMP effects
0.0 0.2 REACTOME RNA POL III CHAIN ELONGATION Genes involved in RNA Polymerase III Chain Elongation
0.0 0.4 REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
0.0 0.3 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.6 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.0 0.1 REACTOME SIGNALING BY NOTCH4 Genes involved in Signaling by NOTCH4