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PRJNA195909:zebrafish embryo and larva development

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Results for batf2+batf3

Z-value: 1.37

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Transcription factors associated with batf2+batf3

Gene Symbol Gene ID Gene Info
ENSDARG00000042577 basic leucine zipper transcription factor, ATF-like 3
ENSDARG00000105562 si_dkey-23i12.7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
batf3dr11_v1_chr20_-_37813863_378138630.942.0e-04Click!
si:dkey-23i12.7dr11_v1_chr7_+_25049545_25049577-0.166.7e-01Click!

Activity profile of batf2+batf3 motif

Sorted Z-values of batf2+batf3 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr16_-_29387215 3.52 ENSDART00000148787
S100 calcium binding protein A1
chr16_+_27614989 3.34 ENSDART00000005625
GLI pathogenesis-related 2, like
chr23_-_1571682 2.37 ENSDART00000013635
F-box protein 30b
chr15_+_34963316 2.17 ENSDART00000153840
si:ch73-95l15.5
chr25_-_6447835 2.10 ENSDART00000012820
snurportin 1
chr3_-_40658820 2.04 ENSDART00000191948
ring finger protein 216
chr6_+_475264 1.89 ENSDART00000193615

chr17_+_15674052 1.89 ENSDART00000156726
BTB and CNC homology 1, basic leucine zipper transcription factor 2a
chr16_-_41667101 1.84 ENSDART00000084528
ATPase secretory pathway Ca2+ transporting 1
chr25_-_6448050 1.82 ENSDART00000180616
snurportin 1
chr7_-_69352424 1.62 ENSDART00000170714
adaptor-related protein complex 1, gamma 1 subunit
chr25_+_19913611 1.62 ENSDART00000155029
GRAM domain containing 4b
chr8_+_11687586 1.60 ENSDART00000146241
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a
chr11_+_24314148 1.33 ENSDART00000171491
RAS (RAD and GEM)-like GTP-binding 1
chr11_+_28166165 1.25 ENSDART00000169360
ENSDART00000192311
eph receptor B2b
chr14_-_32959851 1.24 ENSDART00000075157
cysteine-rich hydrophobic domain 1
chr21_-_14762944 1.19 ENSDART00000114096
arrestin domain containing 1b
chr11_+_24313931 1.10 ENSDART00000017599
ENSDART00000166045
RAS (RAD and GEM)-like GTP-binding 1
chr15_-_20412286 1.03 ENSDART00000008589
calcineurin-like EF-hand protein 2
chr22_+_1821718 0.94 ENSDART00000132220
zinc finger protein 1002
chr22_+_2228919 0.93 ENSDART00000133475
zinc finger protein 1161
chr22_+_1517318 0.90 ENSDART00000160406
si:ch211-255f4.5
chr22_+_2648931 0.89 ENSDART00000106357
zgc:110821
chr3_-_16413606 0.89 ENSDART00000127309
ENSDART00000017172
ENSDART00000136465
elongation factor Tu GTP binding domain containing 2
chr22_+_1641547 0.88 ENSDART00000159804
si:dkey-1b17.2
chr22_+_1462177 0.85 ENSDART00000164685
si:dkeyp-53d3.5
chr22_+_2715815 0.83 ENSDART00000042770
zinc finger protein 1163
chr1_+_41666611 0.82 ENSDART00000145789
F-box protein 41
chr1_-_20068155 0.81 ENSDART00000102993
methyltransferase like 14
chr22_+_1751640 0.79 ENSDART00000162093
zinc finger protein 1169
chr22_+_1668471 0.77 ENSDART00000163358
si:dkey-1b17.5
chr22_+_1953096 0.77 ENSDART00000166630
ENSDART00000186234
si:dkey-15h8.16
chr22_+_1940595 0.77 ENSDART00000163506
zinc finger protein 1167
chr10_+_28306749 0.77 ENSDART00000142016
peptidyl-tRNA hydrolase 2
chr5_+_11812089 0.76 ENSDART00000111359
F-box protein 21
chr22_+_2524615 0.76 ENSDART00000134277
zinc finger protein 1003
chr2_+_27341559 0.75 ENSDART00000176838
testis-specific kinase 2
chr24_+_25822999 0.75 ENSDART00000109809
SH3-domain kinase binding protein 1
chr22_+_2751887 0.74 ENSDART00000133652
si:dkey-20i20.11
chr1_+_10305611 0.67 ENSDART00000043881
zgc:77880
chr22_+_2315996 0.66 ENSDART00000132489
zinc finger protein 1175
chr17_-_14591764 0.66 ENSDART00000174703
dishevelled associated activator of morphogenesis 1a
chr22_+_2403068 0.65 ENSDART00000132925
ENSDART00000132569
zgc:112977
chr4_-_13502549 0.65 ENSDART00000140366
si:ch211-266a5.12
chr25_+_37435720 0.61 ENSDART00000164390
charged multivesicular body protein 1A
chr11_-_43226255 0.60 ENSDART00000172929
spectrin, beta, non-erythrocytic 1
chr22_+_2345752 0.54 ENSDART00000143687
zgc:174224
chr5_+_20823409 0.52 ENSDART00000093185
ENSDART00000142894
LIM domain kinase 2
chr18_-_12451772 0.52 ENSDART00000175083
si:ch211-1e14.1
chr3_-_40162843 0.51 ENSDART00000129664
ENSDART00000025285
developmentally regulated GTP binding protein 2
chr8_-_21110233 0.49 ENSDART00000127371
ENSDART00000100276
transmembrane and coiled-coil domains 1
chr22_+_1904546 0.49 ENSDART00000164865
si:dkey-15h8.10
chr22_+_2390544 0.48 ENSDART00000147345
ENSDART00000133611
zgc:171435
chr22_+_2183110 0.47 ENSDART00000159279
ENSDART00000121703
zinc finger protein 1152
chr22_+_2207502 0.46 ENSDART00000169162
si:dkeyp-79b7.12
chr22_+_2801464 0.46 ENSDART00000132419
si:dkey-20i20.7
chr22_+_2120815 0.38 ENSDART00000169133
ENSDART00000166644
ENSDART00000162221
ENSDART00000157840
zinc finger protein 1155
chr7_+_8670398 0.38 ENSDART00000164195
si:ch211-1o7.2
chr22_+_2298419 0.37 ENSDART00000143499
zinc finger protein 1180
chr22_+_1947494 0.37 ENSDART00000159121
si:dkey-15h8.15
chr22_+_2111120 0.33 ENSDART00000165525
zinc finger protein 1144
chr3_-_49514874 0.32 ENSDART00000167179
anti-silencing function 1Ba histone chaperone
chr22_+_2819613 0.32 ENSDART00000131234
si:dkey-20i20.3
chr22_+_2254972 0.28 ENSDART00000144906
zinc finger protein 1157
chr22_+_2189356 0.28 ENSDART00000157502
ENSDART00000164188
zinc finger protein 1165
chr22_+_2844865 0.26 ENSDART00000139123
si:dkey-20i20.4
chr7_+_13464878 0.26 ENSDART00000172969
diacylglycerol lipase, alpha
chr22_+_1922293 0.18 ENSDART00000165758
zinc finger protein 1181
chr22_+_1615691 0.18 ENSDART00000171555
si:ch211-255f4.13
chr15_-_762319 0.17 ENSDART00000154306
ENSDART00000157492
si:dkey-7i4.16
zinc finger protein 1011
chr22_+_1930589 0.15 ENSDART00000159807
zinc finger protein 1153
chr22_+_2247645 0.11 ENSDART00000143366
ENSDART00000147852
si:dkey-4c15.8
chr8_+_53120278 0.11 ENSDART00000125232
nuclear receptor subfamily 2, group C, member 2
chr22_+_1853999 0.10 ENSDART00000163288
zinc finger protein 1174
chr25_+_7321675 0.06 ENSDART00000104712
ENSDART00000142934
high mobility group 20A
chr4_+_1283068 0.03 ENSDART00000167233
cholinergic receptor, muscarinic 2a

Network of associatons between targets according to the STRING database.

First level regulatory network of batf2+batf3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.9 GO:0061015 RNA import into nucleus(GO:0006404) snRNA import into nucleus(GO:0061015)
0.5 2.4 GO:1901842 regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.4 1.6 GO:0034163 regulation of toll-like receptor 9 signaling pathway(GO:0034163) negative regulation of toll-like receptor 9 signaling pathway(GO:0034164)
0.4 1.8 GO:0055071 manganese ion homeostasis(GO:0055071)
0.2 0.8 GO:0060019 radial glial cell differentiation(GO:0060019)
0.1 1.6 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 0.3 GO:0006335 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.1 0.5 GO:0032469 endoplasmic reticulum calcium ion homeostasis(GO:0032469)
0.1 0.3 GO:0071926 endocannabinoid signaling pathway(GO:0071926) retrograde trans-synaptic signaling by lipid(GO:0098920) retrograde trans-synaptic signaling by endocannabinoid(GO:0098921)
0.1 5.2 GO:0008016 regulation of heart contraction(GO:0008016)
0.0 1.3 GO:0021952 central nervous system projection neuron axonogenesis(GO:0021952)
0.0 0.6 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.7 GO:0072554 endothelial tube morphogenesis(GO:0061154) blood vessel lumenization(GO:0072554)
0.0 1.9 GO:0021549 cerebellum development(GO:0021549)
0.0 0.7 GO:0021986 habenula development(GO:0021986)
0.0 0.7 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.6 GO:0030121 AP-1 adaptor complex(GO:0030121)
0.2 0.8 GO:0045293 MIS complex(GO:0036396) mRNA editing complex(GO:0045293)
0.1 0.6 GO:0008091 spectrin(GO:0008091)
0.1 0.9 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 1.6 GO:0033017 sarcoplasmic reticulum membrane(GO:0033017)
0.0 0.6 GO:0000815 ESCRT III complex(GO:0000815)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.8 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.3 0.9 GO:0030623 U5 snRNA binding(GO:0030623)
0.3 0.8 GO:0001734 mRNA (N6-adenosine)-methyltransferase activity(GO:0001734)
0.2 1.2 GO:1990756 protein binding, bridging involved in substrate recognition for ubiquitination(GO:1990756)
0.2 3.9 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 3.5 GO:0048306 calcium-dependent protein binding(GO:0048306)
0.1 0.8 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.6 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 2.2 GO:0098599 palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)
0.1 2.4 GO:0005246 calcium channel regulator activity(GO:0005246)
0.1 1.3 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.1 1.6 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.3 GO:0004465 lipoprotein lipase activity(GO:0004465)
0.0 0.7 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 2.3 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID RHOA PATHWAY RhoA signaling pathway
0.0 3.5 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.0 0.7 PID ERBB1 INTERNALIZATION PATHWAY Internalization of ErbB1
0.0 0.3 PID NCADHERIN PATHWAY N-cadherin signaling events
0.0 0.6 PID TGFBR PATHWAY TGF-beta receptor signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.6 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.1 3.9 REACTOME METABOLISM OF NON CODING RNA Genes involved in Metabolism of non-coding RNA
0.0 0.6 REACTOME INTERACTION BETWEEN L1 AND ANKYRINS Genes involved in Interaction between L1 and Ankyrins
0.0 1.8 REACTOME ION TRANSPORT BY P TYPE ATPASES Genes involved in Ion transport by P-type ATPases
0.0 0.5 REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE Genes involved in Sema4D induced cell migration and growth-cone collapse
0.0 0.9 REACTOME MRNA SPLICING MINOR PATHWAY Genes involved in mRNA Splicing - Minor Pathway
0.0 0.7 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation