PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zbtb7c | dr11_v1_chr21_-_3201027_3201027 | 0.52 | 8.3e-08 | Click! |
zbtb7a | dr11_v1_chr22_-_20376488_20376488 | 0.40 | 7.0e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_24371312 Show fit | 15.22 |
ENSDART00000149362
|
phosphatidylinositol transfer protein, alpha b |
|
chr11_-_3552067 Show fit | 9.59 |
ENSDART00000163656
|
si:dkey-33m11.6 |
|
chr4_+_17279966 Show fit | 9.43 |
ENSDART00000067005
ENSDART00000137487 |
branched chain amino-acid transaminase 1, cytosolic |
|
chr19_-_9472893 Show fit | 7.69 |
ENSDART00000045565
ENSDART00000137505 |
vesicle-associated membrane protein 1 |
|
chr23_+_28582865 Show fit | 5.11 |
ENSDART00000020296
|
L1 cell adhesion molecule, paralog a |
|
chr6_-_19305589 Show fit | 5.02 |
ENSDART00000165484
|
Jupiter microtubule associated homolog 1a |
|
chr10_+_21789954 Show fit | 4.77 |
ENSDART00000157769
ENSDART00000171703 |
protocadherin 1 gamma c 5 |
|
chr19_-_10243148 Show fit | 4.77 |
ENSDART00000148073
|
shisa family member 7 |
|
chr14_-_21219659 Show fit | 4.73 |
ENSDART00000089867
|
protein phosphatase 2, regulatory subunit B, gamma b |
|
chr10_+_26515946 Show fit | 4.48 |
ENSDART00000134276
|
synaptojanin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.2 | GO:0015914 | phospholipid transport(GO:0015914) |
2.4 | 9.4 | GO:0009098 | leucine biosynthetic process(GO:0009098) |
0.5 | 7.7 | GO:0035493 | SNARE complex assembly(GO:0035493) |
1.8 | 5.4 | GO:0018315 | establishment of synaptic specificity at neuromuscular junction(GO:0007529) molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040) glycine receptor clustering(GO:0072579) |
0.2 | 5.1 | GO:0045773 | positive regulation of axon extension(GO:0045773) |
0.5 | 4.8 | GO:0048172 | regulation of short-term neuronal synaptic plasticity(GO:0048172) |
0.5 | 4.7 | GO:0070262 | peptidyl-serine dephosphorylation(GO:0070262) |
0.3 | 4.5 | GO:0046549 | retinal cone cell development(GO:0046549) |
0.0 | 3.9 | GO:0007224 | smoothened signaling pathway(GO:0007224) |
0.1 | 3.4 | GO:0021854 | hypothalamus development(GO:0021854) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.7 | GO:0031201 | SNARE complex(GO:0031201) |
0.0 | 5.4 | GO:0099572 | postsynaptic specialization(GO:0099572) |
0.4 | 5.1 | GO:0044295 | axonal growth cone(GO:0044295) |
0.3 | 4.8 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.1 | 4.7 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.2 | 3.8 | GO:0036038 | MKS complex(GO:0036038) |
0.0 | 2.4 | GO:0070160 | bicellular tight junction(GO:0005923) occluding junction(GO:0070160) |
0.0 | 2.2 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 1.9 | GO:0002102 | podosome(GO:0002102) |
0.3 | 1.8 | GO:0005955 | calcineurin complex(GO:0005955) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.2 | 15.2 | GO:0008526 | phosphatidylinositol transporter activity(GO:0008526) |
2.4 | 9.4 | GO:0052656 | branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656) |
0.2 | 7.7 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
1.8 | 5.4 | GO:0061599 | molybdopterin adenylyltransferase activity(GO:0061598) molybdopterin molybdotransferase activity(GO:0061599) |
1.0 | 5.1 | GO:0008046 | axon guidance receptor activity(GO:0008046) |
0.0 | 4.6 | GO:0019888 | protein phosphatase regulator activity(GO:0019888) |
0.3 | 4.5 | GO:0034596 | phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) |
0.6 | 4.1 | GO:0019136 | deoxynucleoside kinase activity(GO:0019136) |
0.6 | 3.8 | GO:0008158 | hedgehog receptor activity(GO:0008158) |
0.2 | 2.4 | GO:0005158 | insulin receptor binding(GO:0005158) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 9.4 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 4.5 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.1 | 1.0 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 9.4 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.5 | 7.7 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.3 | 5.9 | REACTOME PYRIMIDINE METABOLISM | Genes involved in Pyrimidine metabolism |
0.1 | 4.5 | REACTOME SYNTHESIS OF PIPS AT THE PLASMA MEMBRANE | Genes involved in Synthesis of PIPs at the plasma membrane |
0.1 | 2.8 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
0.0 | 1.6 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.1 | 1.5 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.0 | 1.1 | REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN | Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
0.1 | 1.0 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |
0.0 | 0.4 | REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA | Genes involved in Activation of Chaperones by ATF6-alpha |