PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
tcf7l2 | dr11_v1_chr12_-_31012741_31012741 | 0.78 | 1.3e-20 | Click! |
tcf7l1b | dr11_v1_chr8_-_52229462_52229462 | 0.33 | 9.9e-04 | Click! |
tcf7l1a | dr11_v1_chr10_-_42237304_42237304 | -0.21 | 4.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_39011514 Show fit | 33.85 |
ENSDART00000075123
|
Purkinje cell protein 4a |
|
chr14_+_22172047 Show fit | 21.52 |
ENSDART00000114750
ENSDART00000148259 |
gamma-aminobutyric acid (GABA) A receptor, beta 2 |
|
chr2_-_30784198 Show fit | 21.21 |
ENSDART00000182523
ENSDART00000147355 |
regulator of G protein signaling 20 |
|
chr1_-_29045426 Show fit | 19.95 |
ENSDART00000019770
|
glycoprotein M6Ba |
|
chr17_+_27176243 Show fit | 19.20 |
ENSDART00000162527
|
si:ch211-160f23.7 |
|
chr17_-_20897250 Show fit | 17.56 |
ENSDART00000088106
|
ankyrin 3b |
|
chr7_+_27977065 Show fit | 16.46 |
ENSDART00000089574
|
tubby bipartite transcription factor |
|
chr16_+_32559821 Show fit | 15.99 |
ENSDART00000093250
|
POU class 3 homeobox 2b |
|
chr20_-_9436521 Show fit | 15.88 |
ENSDART00000133000
|
zgc:101840 |
|
chr19_+_31771270 Show fit | 15.63 |
ENSDART00000147474
|
stathmin 2b |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 22.3 | GO:0048675 | axon extension(GO:0048675) |
5.3 | 21.0 | GO:0060074 | synapse maturation(GO:0060074) |
6.7 | 20.0 | GO:0051580 | regulation of neurotransmitter uptake(GO:0051580) negative regulation of anion transport(GO:1903792) |
0.1 | 19.4 | GO:0006470 | protein dephosphorylation(GO:0006470) |
0.1 | 18.2 | GO:0070588 | calcium ion transmembrane transport(GO:0070588) |
0.7 | 17.7 | GO:0031114 | regulation of microtubule depolymerization(GO:0031114) |
0.3 | 16.7 | GO:0061512 | protein localization to cilium(GO:0061512) |
1.8 | 16.5 | GO:0035588 | adenosine receptor signaling pathway(GO:0001973) purinergic receptor signaling pathway(GO:0035587) G-protein coupled purinergic receptor signaling pathway(GO:0035588) |
0.9 | 16.4 | GO:0060079 | excitatory postsynaptic potential(GO:0060079) chemical synaptic transmission, postsynaptic(GO:0099565) |
0.1 | 14.3 | GO:0051260 | protein homooligomerization(GO:0051260) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 28.4 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
0.4 | 27.8 | GO:0043025 | neuronal cell body(GO:0043025) |
0.1 | 26.2 | GO:0000139 | Golgi membrane(GO:0000139) |
0.0 | 22.5 | GO:0043005 | neuron projection(GO:0043005) |
0.2 | 20.3 | GO:0030658 | transport vesicle membrane(GO:0030658) |
0.2 | 16.5 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
1.1 | 16.4 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.3 | 15.6 | GO:0030426 | growth cone(GO:0030426) |
0.3 | 14.2 | GO:0043204 | perikaryon(GO:0043204) |
0.6 | 13.2 | GO:0034706 | voltage-gated sodium channel complex(GO:0001518) sodium channel complex(GO:0034706) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 73.5 | GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978) |
0.3 | 55.8 | GO:0005516 | calmodulin binding(GO:0005516) |
0.1 | 31.8 | GO:0042802 | identical protein binding(GO:0042802) |
0.1 | 27.0 | GO:0015631 | tubulin binding(GO:0015631) |
1.0 | 21.8 | GO:0019894 | kinesin binding(GO:0019894) |
0.1 | 19.4 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
0.5 | 16.5 | GO:0031683 | G-protein beta/gamma-subunit complex binding(GO:0031683) |
0.8 | 16.4 | GO:0004972 | NMDA glutamate receptor activity(GO:0004972) |
0.4 | 15.2 | GO:0004435 | phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629) |
0.2 | 14.5 | GO:0031490 | chromatin DNA binding(GO:0031490) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 28.7 | ST G ALPHA I PATHWAY | G alpha i Pathway |
0.3 | 15.6 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.3 | 14.2 | PID NOTCH PATHWAY | Notch signaling pathway |
0.2 | 12.7 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.5 | 11.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.6 | 10.2 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.3 | 6.9 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.1 | 4.3 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.1 | 4.0 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.3 | 3.9 | PID S1P S1P1 PATHWAY | S1P1 pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 29.7 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
1.4 | 21.5 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
1.1 | 17.7 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.4 | 14.2 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.2 | 13.8 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.5 | 11.9 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.7 | 11.5 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.1 | 11.1 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.6 | 8.0 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.4 | 6.4 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |