PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
prdm14 | dr11_v1_chr24_+_14451404_14451404 | 0.27 | 7.6e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_+_27020201 Show fit | 15.82 |
ENSDART00000126919
ENSDART00000016014 |
chromogranin A |
|
chr11_-_23080970 Show fit | 10.43 |
ENSDART00000127791
|
ATPase plasma membrane Ca2+ transporting 2 |
|
chr14_-_30642819 Show fit | 10.39 |
ENSDART00000078154
|
neuronal PAS domain protein 4a |
|
chr25_-_8030425 Show fit | 8.27 |
ENSDART00000014964
|
calcium/calmodulin-dependent protein kinase 1Db |
|
chr21_-_43949208 Show fit | 7.69 |
ENSDART00000150983
|
calcium/calmodulin-dependent protein kinase II alpha |
|
chr5_-_45877387 Show fit | 6.34 |
ENSDART00000183714
ENSDART00000041503 |
solute carrier family 4 (sodium bicarbonate cotransporter), member 4a |
|
chr10_-_43721530 Show fit | 5.74 |
ENSDART00000025366
|
centrin 3 |
|
chr21_-_21089781 Show fit | 5.71 |
ENSDART00000144361
|
ankyrin 1, erythrocytic b |
|
chr11_-_18791834 Show fit | 5.65 |
ENSDART00000156431
|
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b |
|
chr4_-_22207873 Show fit | 5.62 |
ENSDART00000142140
|
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.9 | GO:0018105 | peptidyl-serine phosphorylation(GO:0018105) |
5.3 | 15.8 | GO:0090278 | negative regulation of peptide secretion(GO:0002792) negative regulation of peptide hormone secretion(GO:0090278) |
2.1 | 10.4 | GO:0060080 | inhibitory postsynaptic potential(GO:0060080) |
0.0 | 9.7 | GO:0070588 | calcium ion transmembrane transport(GO:0070588) |
0.3 | 8.3 | GO:0035622 | intrahepatic bile duct development(GO:0035622) |
0.1 | 7.7 | GO:0003146 | heart jogging(GO:0003146) |
0.7 | 7.0 | GO:0031998 | regulation of fatty acid beta-oxidation(GO:0031998) |
0.3 | 6.3 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.4 | 5.6 | GO:0006003 | fructose 2,6-bisphosphate metabolic process(GO:0006003) |
0.0 | 5.6 | GO:0050808 | synapse organization(GO:0050808) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 20.3 | GO:0005829 | cytosol(GO:0005829) |
1.6 | 15.8 | GO:0042583 | chromaffin granule(GO:0042583) |
0.0 | 12.3 | GO:0043005 | neuron projection(GO:0043005) |
0.2 | 10.4 | GO:0099634 | postsynaptic density membrane(GO:0098839) postsynaptic specialization membrane(GO:0099634) |
0.5 | 8.3 | GO:0032591 | dendritic spine membrane(GO:0032591) |
0.1 | 7.0 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.1 | 6.3 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 5.7 | GO:0005815 | microtubule organizing center(GO:0005815) |
0.1 | 4.8 | GO:0048786 | presynaptic active zone(GO:0048786) |
0.1 | 3.9 | GO:0045211 | postsynaptic membrane(GO:0045211) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 25.6 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.4 | 10.4 | GO:0005388 | calcium-transporting ATPase activity(GO:0005388) |
0.0 | 8.8 | GO:0008017 | microtubule binding(GO:0008017) |
0.0 | 8.8 | GO:0046983 | protein dimerization activity(GO:0046983) |
0.0 | 7.9 | GO:0005085 | guanyl-nucleotide exchange factor activity(GO:0005085) |
1.0 | 7.0 | GO:0016416 | carnitine O-palmitoyltransferase activity(GO:0004095) O-palmitoyltransferase activity(GO:0016416) |
0.5 | 6.3 | GO:0008510 | sodium:bicarbonate symporter activity(GO:0008510) |
0.4 | 5.7 | GO:0030507 | spectrin binding(GO:0030507) |
0.4 | 5.6 | GO:0003873 | 6-phosphofructo-2-kinase activity(GO:0003873) |
0.0 | 5.2 | GO:0004879 | RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding(GO:0004879) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 8.3 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.4 | 7.7 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.2 | 7.7 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.1 | 3.9 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.1 | 3.1 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.1 | 2.9 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.4 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 1.0 | SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES | Genes related to the insulin receptor pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 10.4 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
2.6 | 7.7 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |
0.1 | 4.7 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.3 | 4.4 | REACTOME METABOLISM OF POLYAMINES | Genes involved in Metabolism of polyamines |
0.2 | 3.9 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.2 | 3.1 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
0.3 | 3.0 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS | Genes involved in CREB phosphorylation through the activation of Ras |
0.6 | 2.5 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.1 | 2.5 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.1 | 1.8 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |